Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_F10
         (906 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1294 - 36076524-36076554,36076821-36076891,36077221-360772...   100   3e-21
05_05_0108 + 22451440-22451541,22452228-22452427,22452979-22453018     99   4e-21
07_03_0078 - 13147741-13148913                                         30   2.2  
09_01_0024 + 438288-438542,439020-439069,440096-440351                 29   6.7  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    28   8.9  

>01_06_1294 -
           36076524-36076554,36076821-36076891,36077221-36077275,
           36077363-36077562,36078614-36078715
          Length = 152

 Score = 99.5 bits (237), Expect = 3e-21
 Identities = 54/100 (54%), Positives = 65/100 (65%)
 Frame = +1

Query: 100 VGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAM 279
           VG+ KGH  TK          + +  RP+  KG  TK   FVR L+REVVG A YEKR  
Sbjct: 12  VGINKGHVVTK----------RELPPRPSDRKGKSTKRVNFVRGLIREVVGFAPYEKRIT 61

Query: 280 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNXLAQMR 399
           ELLKV KDKRALK  KR+LGTH RAK+KREE++  + +MR
Sbjct: 62  ELLKVGKDKRALKVAKRKLGTHKRAKKKREEMAGVIRKMR 101


>05_05_0108 + 22451440-22451541,22452228-22452427,22452979-22453018
          Length = 113

 Score = 99.1 bits (236), Expect = 4e-21
 Identities = 54/100 (54%), Positives = 65/100 (65%)
 Frame = +1

Query: 100 VGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAM 279
           VG+ KGH  TK          + +  RP+  KG  TK   FVR+L+REV G A YEKR  
Sbjct: 12  VGINKGHVVTK----------RELPPRPSDRKGKSTKRVTFVRNLIREVAGFAPYEKRIT 61

Query: 280 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNXLAQMR 399
           ELLKV KDKRALK  KR+LGTH RAK+KREE++  L +MR
Sbjct: 62  ELLKVGKDKRALKVAKRKLGTHKRAKKKREEMAGVLRKMR 101


>07_03_0078 - 13147741-13148913
          Length = 390

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -2

Query: 185 AGLILMALSVIPLRPADILVVLWPF 111
           AGL+  AL VIP  P  + +V WPF
Sbjct: 71  AGLLYFALVVIPALPGVLRLVAWPF 95


>09_01_0024 + 438288-438542,439020-439069,440096-440351
          Length = 186

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = +1

Query: 256 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN 381
           A++E R  E LK ++++ A K LKR+     + ++KR + +N
Sbjct: 122 AEFELRREERLKEAEERTAKKRLKRQKKKQRKKEKKRSKTNN 163


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 16/44 (36%), Positives = 17/44 (38%)
 Frame = +2

Query: 773  PXPRGXRXFXFXGXPLPXXXXSXXSPAPPVXSXGGXGVLPSPKG 904
            P P G R     G P P        P PP    GG G  P+P G
Sbjct: 1164 PPPAGFRG----GTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPG 1203


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,988,813
Number of Sequences: 37544
Number of extensions: 310341
Number of successful extensions: 606
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)