Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_F08
         (1380 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    31   0.10 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   2.9  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   6.8  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 30.7 bits (66), Expect = 0.10
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = +1

Query: 76  GYXGGXVXXEXGXVXGRGXRGGXRGXGXA*GXK 174
           GY GG      G   GRG RGG RG G   G +
Sbjct: 56  GYGGGDDGYGGGGRGGRGGRGGGRGRGRGRGGR 88



 Score = 29.5 bits (63), Expect = 0.24
 Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
 Frame = +2

Query: 608 GGXXRXTKGEGGXXARG-XXDXRPEGGXXXXGGXGXXGGXGGR 733
           GG      G GG   RG     R  GG    GG G   G GGR
Sbjct: 66  GGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGGYGDRNGDGGR 108


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 2.9
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -1

Query: 684 PPSGRXSXXPRAXXPPSPXVXLXXPPXRVFL 592
           PP+ R +  PRA     P V L  PP R  L
Sbjct: 109 PPTTRFAPEPRAEVKFVPSVPLKTPPVRPLL 139



 Score = 24.2 bits (50), Expect = 9.0
 Identities = 11/40 (27%), Positives = 13/40 (32%)
 Frame = -1

Query: 726 PXPPXXPXPPLXXLPPSGRXSXXPRAXXPPSPXVXLXXPP 607
           P PP  P P    +PP       P     P     +  PP
Sbjct: 219 PQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPP 258


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 6.8
 Identities = 12/33 (36%), Positives = 12/33 (36%)
 Frame = +2

Query: 632 GEGGXXARGXXDXRPEGGXXXXGGXGXXGGXGG 730
           G G   A         GG    GG G  GG GG
Sbjct: 146 GSGAIHASPNAQNPSSGGRSSSGGGGGGGGGGG 178


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,581
Number of Sequences: 2352
Number of extensions: 7293
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 159306840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)