Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_F05
         (894 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase w...    33   1.4  
X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2 pr...    33   1.4  
AK092711-1|BAC03955.1|  149|Homo sapiens protein ( Homo sapiens ...    31   5.6  
AK095243-1|BAC04507.1|  154|Homo sapiens protein ( Homo sapiens ...    30   9.9  

>Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase with
           SH3 domain, leucine zipper domain and proline rich
           protein.
          Length = 953

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 21/68 (30%), Positives = 34/68 (50%)
 Frame = -1

Query: 687 ERRTGIR*AXGSEQESARGSFPGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPAT 508
           ER  G+    GS+Q S+     G++P    +  GFA+ +   +F +A  GG +   +P +
Sbjct: 573 ERLKGL--GEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYS 630

Query: 507 RPFYGSWP 484
            P Y S P
Sbjct: 631 TPSYLSVP 638


>X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2
           protein.
          Length = 954

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 21/68 (30%), Positives = 34/68 (50%)
 Frame = -1

Query: 687 ERRTGIR*AXGSEQESARGSFPGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPAT 508
           ER  G+    GS+Q S+     G++P    +  GFA+ +   +F +A  GG +   +P +
Sbjct: 574 ERLKGL--GEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYS 631

Query: 507 RPFYGSWP 484
            P Y S P
Sbjct: 632 TPSYLSVP 639


>AK092711-1|BAC03955.1|  149|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35392 fis, clone SKNSH2000716. ).
          Length = 149

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 20/39 (51%), Positives = 20/39 (51%)
 Frame = -1

Query: 546 RQGGGAYGKTPATRPFYGSWPFAGLLLTCSFLRYPPDSV 430
           RQ  G  G   A R F  S P  GLL  CS LR  PDSV
Sbjct: 69  RQHFGIPGYPEAARDFSSS-PAPGLLTLCSRLRAKPDSV 106


>AK095243-1|BAC04507.1|  154|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37924 fis, clone CTONG2000218. ).
          Length = 154

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 24/78 (30%), Positives = 32/78 (41%)
 Frame = +1

Query: 622 WKAPSCALLFRXXRLPDTCPPFSLRGSVALSHSSRCXYLSSGVXRSLPTRGCVCQTPRST 801
           W AP  ALL    RL  TCPP      +  S    C  LS  V      +G +  +    
Sbjct: 18  WWAPGPALLLEW-RLRTTCPPAGFGYKLCASAEQLCPLLSCAV-----NQGSLWLSGARP 71

Query: 802 RTVAPYSX*PXPXDPTPG 855
           R++  ++  P P  P PG
Sbjct: 72  RSLVWHAG-PLPGGPLPG 88


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,194,385
Number of Sequences: 237096
Number of extensions: 2207548
Number of successful extensions: 5958
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5956
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)