Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_F04
         (889 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0499 - 3581145-3582425                                           31   0.93 
06_03_0441 - 20820121-20820296,20820554-20820613,20820751-208208...    28   8.6  

>06_01_0499 - 3581145-3582425
          Length = 426

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +3

Query: 687 CIXESANPXGKAXFLLGPPSRSPLTDSPXPXVRSGGGXP 803
           C   S    G   F LG P+  P+ DSP P VR+G   P
Sbjct: 214 CFARSDESVGCEVFSLGSPAWRPVADSPCP-VRAGAASP 251


>06_03_0441 -
           20820121-20820296,20820554-20820613,20820751-20820859,
           20820938-20821041,20821387-20822101,20822580-20822719,
           20823342-20823672
          Length = 544

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 7/50 (14%)
 Frame = +1

Query: 517 MSLDNHNXNAVKKMLIC-------EICDAIALFVTIISCNKQVNNNNCFI 645
           +S  N N  A KK+LIC        IC A+A+   +  C+   ++ N F+
Sbjct: 447 VSFANRNLIAGKKLLICCQNGEDISICVALAIITRLFDCDGFFDHGNSFL 496


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,092,566
Number of Sequences: 37544
Number of extensions: 380998
Number of successful extensions: 883
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)