Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_F04
         (889 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50311-10|AAA92314.1|  135|Caenorhabditis elegans Inhibitor of s...    35   0.089
U50311-8|AAA92312.1|  145|Caenorhabditis elegans Hypothetical pr...    34   0.16 
U50311-11|AAN84861.1|   86|Caenorhabditis elegans Inhibitor of s...    33   0.27 
U42830-3|AAC48275.1|  195|Caenorhabditis elegans Hypothetical pr...    30   2.5  
AC024817-39|AAP68916.1|  128|Caenorhabditis elegans Hypothetical...    29   3.4  
Z98877-4|CAB54473.2|  796|Caenorhabditis elegans Hypothetical pr...    28   7.8  
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    28   7.8  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    28   7.8  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    28   7.8  

>U50311-10|AAA92314.1|  135|Caenorhabditis elegans Inhibitor of
           serine protease likeprotein protein 2, isoform a
           protein.
          Length = 135

 Score = 34.7 bits (76), Expect = 0.089
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +3

Query: 261 TNTACVG-ALIQTCHCNDGLVFNADRKCVPISDC 359
           T  AC    ++ TC C DG V N+  KCV +S+C
Sbjct: 40  TPKACTEQCIMNTCDCKDGFVRNSLGKCVEVSEC 73


>U50311-8|AAA92312.1|  145|Caenorhabditis elegans Hypothetical
           protein C25E10.7 protein.
          Length = 145

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +3

Query: 240 TCDDPYLTNTACVGALIQTCHCNDGLVFNADRKCVPISDC*N 365
           TCDDPY T+      +   C C  GLV N+   C  + +C N
Sbjct: 94  TCDDPYPTSCEHDRCIRNVCRCLPGLVRNSG-TCTSLDECDN 134


>U50311-11|AAN84861.1|   86|Caenorhabditis elegans Inhibitor of
           serine protease likeprotein protein 2, isoform b
           protein.
          Length = 86

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +3

Query: 288 IQTCHCNDGLVFNADRKCVPISDC 359
           + TC C DG V N+  KCV +S+C
Sbjct: 1   MNTCDCKDGFVRNSLGKCVEVSEC 24


>U42830-3|AAC48275.1|  195|Caenorhabditis elegans Hypothetical
           protein C53B7.2 protein.
          Length = 195

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +3

Query: 240 TCDDPYLTNTAC-VGALIQTCHCNDGLVFNADRKCVPISDC 359
           TC+ P   N  C V     +C C  G V++  R+C+P + C
Sbjct: 45  TCESP---NPQCRVDCTRPSCTCLPGHVYSNSRQCIPANSC 82


>AC024817-39|AAP68916.1|  128|Caenorhabditis elegans Hypothetical
           protein Y54G2A.36 protein.
          Length = 128

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
 Frame = +3

Query: 273 CVGALIQTCHCN---DGLVFNADRKCVPISDC 359
           C+GAL+ TC+CN   DG     D  C   + C
Sbjct: 40  CIGALVGTCNCNSCVDGWPCQEDSACGGFNRC 71


>Z98877-4|CAB54473.2|  796|Caenorhabditis elegans Hypothetical
           protein Y69H2.3b protein.
          Length = 796

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 273 CVGALIQTCHCNDGLVFNADRKCVPISDC 359
           C+    + C C  GLV N   +CV +++C
Sbjct: 256 CMMRCEKACSCKKGLVRNRQGQCVKLAEC 284


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +3

Query: 738 PPSRSPLTDSPXPXVRSGGGXPVXXSPP 821
           PP   P+T  P P    GG  P+   PP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPP 743


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +3

Query: 738 PPSRSPLTDSPXPXVRSGGGXPVXXSPP 821
           PP   P+T  P P    GG  P+   PP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPP 743


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +3

Query: 738 PPSRSPLTDSPXPXVRSGGGXPVXXSPP 821
           PP   P+T  P P    GG  P+   PP
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPP 326


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,013,626
Number of Sequences: 27780
Number of extensions: 322757
Number of successful extensions: 789
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)