Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_F01
         (890 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   2.3  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   3.1  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   4.1  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    25   4.1  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 13/36 (36%), Positives = 13/36 (36%)
 Frame = +3

Query: 576 TXPPTQPXXPPPAXXTPXLXPXPPPXVPXNPXHRXP 683
           T  PTQP  P P    P     P P  P  P    P
Sbjct: 203 TGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVP 238



 Score = 24.6 bits (51), Expect = 4.1
 Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
 Frame = +2

Query: 584 PHTTPXPPP--GXXHXXSXPXPPPXRPPXP 667
           P   P PP   G         PPP RPP P
Sbjct: 242 PGMQPRPPSAQGMQRPPMMGQPPPIRPPNP 271


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 14/35 (40%), Positives = 14/35 (40%)
 Frame = -2

Query: 697 GXGGXGXRCXGXXGTXGGGXGXRXGVXXAGGGXXG 593
           G GG G       G  GGG G   G    GGG  G
Sbjct: 201 GAGGGG----SGGGAPGGGGGSSGGPGPGGGGGGG 231


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 12/32 (37%), Positives = 12/32 (37%)
 Frame = -2

Query: 697 GXGGXGXRCXGXXGTXGGGXGXRXGVXXAGGG 602
           G GG G    G  G  GGG     G     GG
Sbjct: 840 GGGGAGGPLRGSSGGAGGGSSGGGGSGGTSGG 871



 Score = 24.2 bits (50), Expect = 5.4
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = -2

Query: 658 GTXGGGXGXRXGVXXAGGGXXGCVGG 581
           G  GGG G   G   +GG   G   G
Sbjct: 674 GAVGGGSGAGGGAGSSGGSGGGLASG 699



 Score = 23.4 bits (48), Expect = 9.4
 Identities = 13/33 (39%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
 Frame = -2

Query: 697 GXGGXGXRCXGXXGTXGG-GXGXRXGVXXAGGG 602
           G  G G    G  G+ GG G G   G    GGG
Sbjct: 674 GAVGGGSGAGGGAGSSGGSGGGLASGSPYGGGG 706


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 9/33 (27%), Positives = 13/33 (39%)
 Frame = +3

Query: 606 PPAXXTPXLXPXPPPXVPXNPXHRXPXPPXPKQ 704
           PP    P +   PP  +P     + P    PK+
Sbjct: 442 PPGEWDPSIRIEPPAAIPSQEVRKRPPEKNPKE 474


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.313    0.140    0.459 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 360,276
Number of Sequences: 2352
Number of extensions: 4527
Number of successful extensions: 32
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95920632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)