Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_E24
(904 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U09123-1|AAB60650.1| 341|Homo sapiens hnRNP protein A2 protein. 33 1.9
M29065-1|AAA36574.1| 341|Homo sapiens protein ( Human hnRNP A2 ... 33 1.9
M29064-1|AAA60271.1| 353|Homo sapiens SNRPB1 protein. 33 1.9
D28877-2|BAA06032.1| 341|Homo sapiens hnRNP A2 protein protein. 33 1.9
D28877-1|BAA06031.1| 353|Homo sapiens hnRNP B1 protein protein. 33 1.9
AF007192-1|AAC02270.1| 338|Homo sapiens intestinal mucin protein. 32 3.3
AF043724-1|AAC39862.1| 359|Homo sapiens hepatitis A virus cellu... 31 4.3
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 31 5.7
Y07848-1|CAA69177.1| 656|Homo sapiens RNA binding protein protein. 30 10.0
X72990-1|CAA51489.1| 656|Homo sapiens EWS protein. 30 10.0
X66899-1|CAA47350.1| 656|Homo sapiens RNA binding protein protein. 30 10.0
CR456490-1|CAG30376.1| 655|Homo sapiens EWSR1 protein. 30 10.0
BC072442-1|AAH72442.1| 655|Homo sapiens Ewing sarcoma breakpoin... 30 10.0
BC011048-1|AAH11048.1| 655|Homo sapiens Ewing sarcoma breakpoin... 30 10.0
BC004817-1|AAH04817.1| 656|Homo sapiens Ewing sarcoma breakpoin... 30 10.0
AL031186-2|CAI18001.1| 656|Homo sapiens Ewing sarcoma breakpoin... 30 10.0
AK056681-1|BAB71252.1| 600|Homo sapiens protein ( Homo sapiens ... 30 10.0
AK056309-1|BAB71145.1| 661|Homo sapiens protein ( Homo sapiens ... 30 10.0
AF007191-1|AAC02269.1| 589|Homo sapiens intestinal mucin protein. 30 10.0
>U09123-1|AAB60650.1| 341|Homo sapiens hnRNP protein A2 protein.
Length = 341
Score = 32.7 bits (71), Expect = 1.9
Identities = 20/62 (32%), Positives = 24/62 (38%)
Frame = -1
Query: 898 GYPXGFGGXPGXPPFXGEXXXGLXAXRXGRGGXGXFSXGEEKXEGGXQXGKXPFSRGGWG 719
GY G+GG PG F G G G GG G + G G G + G +
Sbjct: 231 GY-NGYGGGPGGGNFGGSPGYGGGRGGYGGGGPGYGNQGGGYGGGYDNYGGGNYGSGNYN 289
Query: 718 DF 713
DF
Sbjct: 290 DF 291
>M29065-1|AAA36574.1| 341|Homo sapiens protein ( Human hnRNP A2
protein mRNA. ).
Length = 341
Score = 32.7 bits (71), Expect = 1.9
Identities = 20/62 (32%), Positives = 24/62 (38%)
Frame = -1
Query: 898 GYPXGFGGXPGXPPFXGEXXXGLXAXRXGRGGXGXFSXGEEKXEGGXQXGKXPFSRGGWG 719
GY G+GG PG F G G G GG G + G G G + G +
Sbjct: 231 GY-NGYGGGPGGGNFGGSPGYGGGRGGYGGGGPGYGNQGGGYGGGYDNYGGGNYGSGNYN 289
Query: 718 DF 713
DF
Sbjct: 290 DF 291
>M29064-1|AAA60271.1| 353|Homo sapiens SNRPB1 protein.
Length = 353
Score = 32.7 bits (71), Expect = 1.9
Identities = 20/62 (32%), Positives = 24/62 (38%)
Frame = -1
Query: 898 GYPXGFGGXPGXPPFXGEXXXGLXAXRXGRGGXGXFSXGEEKXEGGXQXGKXPFSRGGWG 719
GY G+GG PG F G G G GG G + G G G + G +
Sbjct: 243 GY-NGYGGGPGGGNFGGSPGYGGGRGGYGGGGPGYGNQGGGYGGGYDNYGGGNYGSGNYN 301
Query: 718 DF 713
DF
Sbjct: 302 DF 303
>D28877-2|BAA06032.1| 341|Homo sapiens hnRNP A2 protein protein.
Length = 341
Score = 32.7 bits (71), Expect = 1.9
Identities = 20/62 (32%), Positives = 24/62 (38%)
Frame = -1
Query: 898 GYPXGFGGXPGXPPFXGEXXXGLXAXRXGRGGXGXFSXGEEKXEGGXQXGKXPFSRGGWG 719
GY G+GG PG F G G G GG G + G G G + G +
Sbjct: 231 GY-NGYGGGPGGGNFGGSPGYGGGRGGYGGGGPGYGNQGGGYGGGYDNYGGGNYGSGNYN 289
Query: 718 DF 713
DF
Sbjct: 290 DF 291
>D28877-1|BAA06031.1| 353|Homo sapiens hnRNP B1 protein protein.
Length = 353
Score = 32.7 bits (71), Expect = 1.9
Identities = 20/62 (32%), Positives = 24/62 (38%)
Frame = -1
Query: 898 GYPXGFGGXPGXPPFXGEXXXGLXAXRXGRGGXGXFSXGEEKXEGGXQXGKXPFSRGGWG 719
GY G+GG PG F G G G GG G + G G G + G +
Sbjct: 243 GY-NGYGGGPGGGNFGGSPGYGGGRGGYGGGGPGYGNQGGGYGGGYDNYGGGNYGSGNYN 301
Query: 718 DF 713
DF
Sbjct: 302 DF 303
>AF007192-1|AAC02270.1| 338|Homo sapiens intestinal mucin protein.
Length = 338
Score = 31.9 bits (69), Expect = 3.3
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 108 WPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 275
WPT T ++L T +S +P T TN++ + T+P +T S P S
Sbjct: 179 WPTATNTLSSLTTNILSSTPVPSTERTTSHTTNINPVSTLVTTLP-TTITRSTPTS 233
>AF043724-1|AAC39862.1| 359|Homo sapiens hepatitis A virus cellular
receptor 1 protein.
Length = 359
Score = 31.5 bits (68), Expect = 4.3
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +3
Query: 126 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP---KADLTSSLP 269
T +TT RTS +P TTT+ T + ++ T TVP T+S+P
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPTTTVPTTMSIPTTTTVPTTMTVSTTTSVP 186
Score = 31.1 bits (67), Expect = 5.7
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +3
Query: 114 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLVLA 287
T+ T T TT T++ +P TTT+ T T +STT + T T+S+P++ ++
Sbjct: 149 TVPTTTTVPTTTVPTTMSIPTTTTVPTTMT-VSTTTSVP-TTTSIPTTTSVPVTTTVS 204
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 31.1 bits (67), Expect = 5.7
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +3
Query: 105 LWPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLT 257
L +L T T+ L+T++ P+T T M TN +T+ T PK + T
Sbjct: 417 LTTSLAPTLTSELSTSQAETSTPRTETTMSPLTNTTTSQGTTRCQPKCEWT 467
>Y07848-1|CAA69177.1| 656|Homo sapiens RNA binding protein protein.
Length = 656
Score = 30.3 bits (65), Expect = 10.0
Identities = 22/65 (33%), Positives = 25/65 (38%), Gaps = 7/65 (10%)
Frame = -1
Query: 892 PXGFGGXPGXPPFXGEXXXGLXAXRXGRGG-------XGXFSXGEEKXEGGXQXGKXPFS 734
P GF P PP G R GRGG G F G GG + G+
Sbjct: 548 PEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRG-MD 606
Query: 733 RGGWG 719
RGG+G
Sbjct: 607 RGGFG 611
>X72990-1|CAA51489.1| 656|Homo sapiens EWS protein.
Length = 656
Score = 30.3 bits (65), Expect = 10.0
Identities = 22/65 (33%), Positives = 25/65 (38%), Gaps = 7/65 (10%)
Frame = -1
Query: 892 PXGFGGXPGXPPFXGEXXXGLXAXRXGRGG-------XGXFSXGEEKXEGGXQXGKXPFS 734
P GF P PP G R GRGG G F G GG + G+
Sbjct: 548 PEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRG-MD 606
Query: 733 RGGWG 719
RGG+G
Sbjct: 607 RGGFG 611
>X66899-1|CAA47350.1| 656|Homo sapiens RNA binding protein protein.
Length = 656
Score = 30.3 bits (65), Expect = 10.0
Identities = 22/65 (33%), Positives = 25/65 (38%), Gaps = 7/65 (10%)
Frame = -1
Query: 892 PXGFGGXPGXPPFXGEXXXGLXAXRXGRGG-------XGXFSXGEEKXEGGXQXGKXPFS 734
P GF P PP G R GRGG G F G GG + G+
Sbjct: 548 PEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRG-MD 606
Query: 733 RGGWG 719
RGG+G
Sbjct: 607 RGGFG 611
>CR456490-1|CAG30376.1| 655|Homo sapiens EWSR1 protein.
Length = 655
Score = 30.3 bits (65), Expect = 10.0
Identities = 22/65 (33%), Positives = 25/65 (38%), Gaps = 7/65 (10%)
Frame = -1
Query: 892 PXGFGGXPGXPPFXGEXXXGLXAXRXGRGG-------XGXFSXGEEKXEGGXQXGKXPFS 734
P GF P PP G R GRGG G F G GG + G+
Sbjct: 547 PEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRG-MD 605
Query: 733 RGGWG 719
RGG+G
Sbjct: 606 RGGFG 610
>BC072442-1|AAH72442.1| 655|Homo sapiens Ewing sarcoma breakpoint
region 1 protein.
Length = 655
Score = 30.3 bits (65), Expect = 10.0
Identities = 22/65 (33%), Positives = 25/65 (38%), Gaps = 7/65 (10%)
Frame = -1
Query: 892 PXGFGGXPGXPPFXGEXXXGLXAXRXGRGG-------XGXFSXGEEKXEGGXQXGKXPFS 734
P GF P PP G R GRGG G F G GG + G+
Sbjct: 547 PEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRG-MD 605
Query: 733 RGGWG 719
RGG+G
Sbjct: 606 RGGFG 610
>BC011048-1|AAH11048.1| 655|Homo sapiens Ewing sarcoma breakpoint
region 1 protein.
Length = 655
Score = 30.3 bits (65), Expect = 10.0
Identities = 22/65 (33%), Positives = 25/65 (38%), Gaps = 7/65 (10%)
Frame = -1
Query: 892 PXGFGGXPGXPPFXGEXXXGLXAXRXGRGG-------XGXFSXGEEKXEGGXQXGKXPFS 734
P GF P PP G R GRGG G F G GG + G+
Sbjct: 547 PEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRG-MD 605
Query: 733 RGGWG 719
RGG+G
Sbjct: 606 RGGFG 610
>BC004817-1|AAH04817.1| 656|Homo sapiens Ewing sarcoma breakpoint
region 1 protein.
Length = 656
Score = 30.3 bits (65), Expect = 10.0
Identities = 22/65 (33%), Positives = 25/65 (38%), Gaps = 7/65 (10%)
Frame = -1
Query: 892 PXGFGGXPGXPPFXGEXXXGLXAXRXGRGG-------XGXFSXGEEKXEGGXQXGKXPFS 734
P GF P PP G R GRGG G F G GG + G+
Sbjct: 548 PEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRG-MD 606
Query: 733 RGGWG 719
RGG+G
Sbjct: 607 RGGFG 611
>AL031186-2|CAI18001.1| 656|Homo sapiens Ewing sarcoma breakpoint
region 1 protein.
Length = 656
Score = 30.3 bits (65), Expect = 10.0
Identities = 22/65 (33%), Positives = 25/65 (38%), Gaps = 7/65 (10%)
Frame = -1
Query: 892 PXGFGGXPGXPPFXGEXXXGLXAXRXGRGG-------XGXFSXGEEKXEGGXQXGKXPFS 734
P GF P PP G R GRGG G F G GG + G+
Sbjct: 548 PEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRG-MD 606
Query: 733 RGGWG 719
RGG+G
Sbjct: 607 RGGFG 611
>AK056681-1|BAB71252.1| 600|Homo sapiens protein ( Homo sapiens
cDNA FLJ32119 fis, clone PEBLM1000034, highly similar to
RNA-BINDING PROTEIN EWS. ).
Length = 600
Score = 30.3 bits (65), Expect = 10.0
Identities = 22/65 (33%), Positives = 25/65 (38%), Gaps = 7/65 (10%)
Frame = -1
Query: 892 PXGFGGXPGXPPFXGEXXXGLXAXRXGRGG-------XGXFSXGEEKXEGGXQXGKXPFS 734
P GF P PP G R GRGG G F G GG + G+
Sbjct: 492 PEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRG-MD 550
Query: 733 RGGWG 719
RGG+G
Sbjct: 551 RGGFG 555
>AK056309-1|BAB71145.1| 661|Homo sapiens protein ( Homo sapiens
cDNA FLJ31747 fis, clone NT2RI2007377, highly similar to
RNA-BINDING PROTEIN EWS. ).
Length = 661
Score = 30.3 bits (65), Expect = 10.0
Identities = 22/65 (33%), Positives = 25/65 (38%), Gaps = 7/65 (10%)
Frame = -1
Query: 892 PXGFGGXPGXPPFXGEXXXGLXAXRXGRGG-------XGXFSXGEEKXEGGXQXGKXPFS 734
P GF P PP G R GRGG G F G GG + G+
Sbjct: 553 PEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRG-MD 611
Query: 733 RGGWG 719
RGG+G
Sbjct: 612 RGGFG 616
>AF007191-1|AAC02269.1| 589|Homo sapiens intestinal mucin protein.
Length = 589
Score = 30.3 bits (65), Expect = 10.0
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +3
Query: 111 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 275
PT T ++L ++ +S ++P T + TNL+ + + T+P +T S P S
Sbjct: 400 PTANSTLSSLTSSILSSTLVPSTDMITSHTTNLTRSSPLLATLP-TTITRSTPTS 453
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,924,327
Number of Sequences: 237096
Number of extensions: 2602079
Number of successful extensions: 15720
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 15096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15686
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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