Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_E23
(916 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118927-1|AAM50787.1| 374|Drosophila melanogaster LD23870p pro... 34 0.24
AJ459409-1|CAD30680.1| 374|Drosophila melanogaster RNA-binding ... 34 0.24
AE014297-964|AAF54396.2| 374|Drosophila melanogaster CG16788-PA... 34 0.24
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ... 33 0.55
AL031227-2|CAA20226.1| 958|Drosophila melanogaster EG:66A1.3 pr... 29 6.7
BT022895-1|AAY55311.1| 341|Drosophila melanogaster IP12531p pro... 29 8.9
BT022865-1|AAY55281.1| 335|Drosophila melanogaster IP12731p pro... 29 8.9
BT022782-1|AAY55198.1| 341|Drosophila melanogaster IP14435p pro... 29 8.9
BT022755-1|AAY55171.1| 341|Drosophila melanogaster IP14735p pro... 29 8.9
BT022747-1|AAY55163.1| 341|Drosophila melanogaster IP14635p pro... 29 8.9
BT022741-1|AAY55157.1| 341|Drosophila melanogaster IP14535p pro... 29 8.9
BT022222-1|AAY54638.1| 341|Drosophila melanogaster IP12431p pro... 29 8.9
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 29 8.9
AY061248-1|AAL28796.1| 341|Drosophila melanogaster LD18667p pro... 29 8.9
AE014297-4193|AAO41605.1| 341|Drosophila melanogaster CG33213-P... 29 8.9
>AY118927-1|AAM50787.1| 374|Drosophila melanogaster LD23870p
protein.
Length = 374
Score = 34.3 bits (75), Expect = 0.24
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 300 DIRYIPGQRQRSR*HS-FPHRRGRSCDARVPVPRPSSENRCRTQ*PHPRXLMSH 458
D + +R RS S P RRGR R P P+ +R RT+ P P+ + H
Sbjct: 169 DSNNVKRERSRSASRSRSPRRRGRGSVERTPPPKRRERSRSRTRSPSPKQVRIH 222
>AJ459409-1|CAD30680.1| 374|Drosophila melanogaster RNA-binding
protein S1 protein.
Length = 374
Score = 34.3 bits (75), Expect = 0.24
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 300 DIRYIPGQRQRSR*HS-FPHRRGRSCDARVPVPRPSSENRCRTQ*PHPRXLMSH 458
D + +R RS S P RRGR R P P+ +R RT+ P P+ + H
Sbjct: 169 DSNNVKRERSRSASRSRSPRRRGRGSVERTPPPKRRERSRSRTRSPSPKQVRIH 222
>AE014297-964|AAF54396.2| 374|Drosophila melanogaster CG16788-PA
protein.
Length = 374
Score = 34.3 bits (75), Expect = 0.24
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 300 DIRYIPGQRQRSR*HS-FPHRRGRSCDARVPVPRPSSENRCRTQ*PHPRXLMSH 458
D + +R RS S P RRGR R P P+ +R RT+ P P+ + H
Sbjct: 169 DSNNVKRERSRSASRSRSPRRRGRGSVERTPPPKRRERSRSRTRSPSPKQVRIH 222
>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
protein.
Length = 1037
Score = 33.1 bits (72), Expect = 0.55
Identities = 21/39 (53%), Positives = 26/39 (66%)
Frame = +1
Query: 319 GKDNVVADTLSRIEEVGAATLEYQSLAQAQKTDAELNNL 435
GK+N +AD LSRI V A+T EY AQ T+ E+NNL
Sbjct: 537 GKENALADGLSRI--VKASTEEYDKNAQ---TNIEINNL 570
>AL031227-2|CAA20226.1| 958|Drosophila melanogaster EG:66A1.3
protein.
Length = 958
Score = 29.5 bits (63), Expect = 6.7
Identities = 22/101 (21%), Positives = 38/101 (37%)
Frame = +3
Query: 375 DARVPVPRPSSENRCRTQ*PHPRXLMSHTQKC*SXRAQMSTCTAKCQHQFHXHTSLSNSE 554
D R P+ P +N+ HT+KC + + + CQ H
Sbjct: 162 DIRRPIKSPQMQNKKTQTLESVHKSHKHTKKCQCKSRRQDSKVSSCQTDIHH-------P 214
Query: 555 DRYSINLHNLSHXGXKXYNQAHHRXLRXXKHTQGLQQMGEG 677
+R ++ L K Q H + + + QG+QQ+ +G
Sbjct: 215 EREQQDIQPLMKDQRKA-KQRHEKDHQLEREQQGIQQLSKG 254
>BT022895-1|AAY55311.1| 341|Drosophila melanogaster IP12531p
protein.
Length = 341
Score = 29.1 bits (62), Expect = 8.9
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +3
Query: 414 RCRTQ*PHPRXLMSHTQKC*SXRAQMSTCTAKCQHQFHXHTSLSNSEDRYSINLHNLSHX 593
RC + H + L H+ C + + S+ KC H ++S+SE + +L N H
Sbjct: 195 RCGQRLDHQKQLKQHSLSCPALAPRKSSMLFKCPHLL--CNAMSHSEMQLLRHLRN--HS 250
Query: 594 GXKXY 608
G K Y
Sbjct: 251 GRKCY 255
>BT022865-1|AAY55281.1| 335|Drosophila melanogaster IP12731p
protein.
Length = 335
Score = 29.1 bits (62), Expect = 8.9
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +3
Query: 414 RCRTQ*PHPRXLMSHTQKC*SXRAQMSTCTAKCQHQFHXHTSLSNSEDRYSINLHNLSHX 593
RC + H + L H+ C + + S+ KC H ++S+SE + +L N H
Sbjct: 189 RCGQRLDHQKQLKQHSLSCPALAPRKSSMLFKCPHLL--CNAMSHSEMQLLRHLRN--HS 244
Query: 594 GXKXY 608
G K Y
Sbjct: 245 GRKCY 249
>BT022782-1|AAY55198.1| 341|Drosophila melanogaster IP14435p
protein.
Length = 341
Score = 29.1 bits (62), Expect = 8.9
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +3
Query: 414 RCRTQ*PHPRXLMSHTQKC*SXRAQMSTCTAKCQHQFHXHTSLSNSEDRYSINLHNLSHX 593
RC + H + L H+ C + + S+ KC H ++S+SE + +L N H
Sbjct: 195 RCGQRLDHQKQLKQHSLSCPALAPRKSSMLFKCPHLL--CNAMSHSEMQLLRHLRN--HS 250
Query: 594 GXKXY 608
G K Y
Sbjct: 251 GRKCY 255
>BT022755-1|AAY55171.1| 341|Drosophila melanogaster IP14735p
protein.
Length = 341
Score = 29.1 bits (62), Expect = 8.9
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +3
Query: 414 RCRTQ*PHPRXLMSHTQKC*SXRAQMSTCTAKCQHQFHXHTSLSNSEDRYSINLHNLSHX 593
RC + H + L H+ C + + S+ KC H ++S+SE + +L N H
Sbjct: 195 RCGQRLDHQKQLKQHSLSCPALAPRKSSMLFKCPHLL--CNAMSHSEMQLLRHLRN--HS 250
Query: 594 GXKXY 608
G K Y
Sbjct: 251 GRKCY 255
>BT022747-1|AAY55163.1| 341|Drosophila melanogaster IP14635p
protein.
Length = 341
Score = 29.1 bits (62), Expect = 8.9
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +3
Query: 414 RCRTQ*PHPRXLMSHTQKC*SXRAQMSTCTAKCQHQFHXHTSLSNSEDRYSINLHNLSHX 593
RC + H + L H+ C + + S+ KC H ++S+SE + +L N H
Sbjct: 195 RCGQRLDHQKQLKQHSLSCPALAPRKSSMLFKCPHLL--CNAMSHSEMQLLRHLRN--HS 250
Query: 594 GXKXY 608
G K Y
Sbjct: 251 GRKCY 255
>BT022741-1|AAY55157.1| 341|Drosophila melanogaster IP14535p
protein.
Length = 341
Score = 29.1 bits (62), Expect = 8.9
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +3
Query: 414 RCRTQ*PHPRXLMSHTQKC*SXRAQMSTCTAKCQHQFHXHTSLSNSEDRYSINLHNLSHX 593
RC + H + L H+ C + + S+ KC H ++S+SE + +L N H
Sbjct: 195 RCGQRLDHQKQLKQHSLSCPALAPRKSSMLFKCPHLL--CNAMSHSEMQLLRHLRN--HS 250
Query: 594 GXKXY 608
G K Y
Sbjct: 251 GRKCY 255
>BT022222-1|AAY54638.1| 341|Drosophila melanogaster IP12431p
protein.
Length = 341
Score = 29.1 bits (62), Expect = 8.9
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +3
Query: 414 RCRTQ*PHPRXLMSHTQKC*SXRAQMSTCTAKCQHQFHXHTSLSNSEDRYSINLHNLSHX 593
RC + H + L H+ C + + S+ KC H ++S+SE + +L N H
Sbjct: 195 RCGQRLDHQKQLKQHSLSCPALAPRKSSMLFKCPHLL--CNAMSHSEMQLLRHLRN--HS 250
Query: 594 GXKXY 608
G K Y
Sbjct: 251 GRKCY 255
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 29.1 bits (62), Expect = 8.9
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = +1
Query: 319 GKDNVVADTLSRIEEVGAATLEYQSLAQAQKTDAELNNLIREXSCLTLKSVRVXGHRCRR 498
GKDN +AD LSRI T+ + L ++ A+ N ++ + + ++ + +
Sbjct: 478 GKDNHIADALSRITIKDLKTINREILKVTTRSKAKQENSCKDEAIVKIQEEKEQTIEKPK 537
Query: 499 VLRNVNISST 528
V VN + T
Sbjct: 538 VYEVVNNNDT 547
Score = 29.1 bits (62), Expect = 8.9
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +1
Query: 595 GXXXTIKLITXRFVXXSIXKDCSKWAKECPKCQRCR-CINTQQHLCPS*TXYCSFRHVHM 771
G T I + + K SK+ K C KCQ+ + +T+ L T +F V +
Sbjct: 669 GISRTQSKIKRFYYWPQMTKTISKYVKTCLKCQQAKITTHTKTPLTLMPTPATAFDTVLI 728
Query: 772 DIIGP 786
D IGP
Sbjct: 729 DTIGP 733
>AY061248-1|AAL28796.1| 341|Drosophila melanogaster LD18667p
protein.
Length = 341
Score = 29.1 bits (62), Expect = 8.9
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +3
Query: 414 RCRTQ*PHPRXLMSHTQKC*SXRAQMSTCTAKCQHQFHXHTSLSNSEDRYSINLHNLSHX 593
RC + H + L H+ C + + S+ KC H ++S+SE + +L N H
Sbjct: 195 RCGQRLDHQKQLKQHSLSCPALAPRKSSMLFKCPHLL--CNAMSHSEMQLLRHLRN--HS 250
Query: 594 GXKXY 608
G K Y
Sbjct: 251 GRKCY 255
>AE014297-4193|AAO41605.1| 341|Drosophila melanogaster CG33213-PA
protein.
Length = 341
Score = 29.1 bits (62), Expect = 8.9
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +3
Query: 414 RCRTQ*PHPRXLMSHTQKC*SXRAQMSTCTAKCQHQFHXHTSLSNSEDRYSINLHNLSHX 593
RC + H + L H+ C + + S+ KC H ++S+SE + +L N H
Sbjct: 195 RCGQRLDHQKQLKQHSLSCPALAPRKSSMLFKCPHLL--CNAMSHSEMQLLRHLRN--HS 250
Query: 594 GXKXY 608
G K Y
Sbjct: 251 GRKCY 255
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,739,118
Number of Sequences: 53049
Number of extensions: 809855
Number of successful extensions: 2393
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2393
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4484945457
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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