Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_E18
(877 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X86019-1|CAA60014.1| 494|Homo sapiens SH3-domain interacting pr... 33 1.0
BC110383-1|AAI10384.1| 594|Homo sapiens FIP1 like 1 (S. cerevis... 33 1.4
BC052959-1|AAH52959.1| 559|Homo sapiens FIP1L1 protein protein. 33 1.4
BC024016-1|AAH24016.1| 559|Homo sapiens FIP1L1 protein protein. 33 1.4
BC011543-1|AAH11543.1| 328|Homo sapiens FIP1L1 protein protein. 33 1.4
AY366510-1|AAQ88277.1| 594|Homo sapiens pre-mRNA 3'end processi... 33 1.4
U77782-1|AAB71624.1| 1236|Homo sapiens N-methyl-D-aspartate rece... 31 4.1
L76224-1|AAA88096.1| 1233|Homo sapiens NMDA receptor protein. 31 4.1
AF110377-1|AAD04629.1| 3859|Homo sapiens PCAF-associated factor ... 31 5.5
AF076974-1|AAD09420.1| 3830|Homo sapiens TRRAP protein protein. 31 5.5
AC004991-1|AAC27675.2| 2089|Homo sapiens unknown protein. 31 5.5
AB209489-1|BAD92726.1| 3587|Homo sapiens Transformation/transcri... 31 5.5
Y11354-1|CAA72189.1| 1083|Homo sapiens subunit of RNA polymerase... 31 7.2
U41344-1|AAC18782.1| 382|Homo sapiens prolargin protein. 31 7.2
U29089-1|AAC50230.1| 382|Homo sapiens proline- arginine-rich en... 31 7.2
CR542270-1|CAG47066.1| 382|Homo sapiens PRELP protein. 31 7.2
CR541787-1|CAG46586.1| 382|Homo sapiens PRELP protein. 31 7.2
BC054003-1|AAH54003.1| 1192|Homo sapiens RNASEN protein protein. 31 7.2
BC032498-1|AAH32498.1| 382|Homo sapiens proline/arginine-rich e... 31 7.2
AY623115-1|AAT38111.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 31 7.2
AL391817-1|CAI17033.1| 382|Homo sapiens proline/arginine-rich e... 31 7.2
AL137077-2|CAI11045.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 31 7.2
AL109911-2|CAI19182.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 31 7.2
AF189011-1|AAF80558.1| 1374|Homo sapiens ribonuclease III protein. 31 7.2
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 30 9.6
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 30 9.6
CR456846-1|CAG33127.1| 202|Homo sapiens PRRG2 protein. 30 9.6
BC026032-1|AAH26032.1| 179|Homo sapiens PRRG2 protein protein. 30 9.6
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 30 9.6
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 30 9.6
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 30 9.6
AF009243-1|AAB67071.1| 202|Homo sapiens proline-rich Gla protei... 30 9.6
>X86019-1|CAA60014.1| 494|Homo sapiens SH3-domain interacting
protein protein.
Length = 494
Score = 33.5 bits (73), Expect = 1.0
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +2
Query: 749 PPGNXPRCXXPVPXPCPXTRNTPSPLXPFGKPWPLPKAPP 868
PP P P+P P P R P P G+ PLP PP
Sbjct: 346 PPLPSPGRSGPLPPPVPSERPPPPVRDPPGRSGPLPPPPP 385
>BC110383-1|AAI10384.1| 594|Homo sapiens FIP1 like 1 (S.
cerevisiae) protein.
Length = 594
Score = 33.1 bits (72), Expect = 1.4
Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 737 PGVFPPGNXPRCXXPVP-XPCPXTRNTPSPLXPFGKPWPLPKAPP 868
P FPPG P P P P P T +T PL P P P APP
Sbjct: 357 PPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGFPPPPGAPP 401
>BC052959-1|AAH52959.1| 559|Homo sapiens FIP1L1 protein protein.
Length = 559
Score = 33.1 bits (72), Expect = 1.4
Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 737 PGVFPPGNXPRCXXPVP-XPCPXTRNTPSPLXPFGKPWPLPKAPP 868
P FPPG P P P P P T +T PL P P P APP
Sbjct: 322 PPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGFPPPPGAPP 366
>BC024016-1|AAH24016.1| 559|Homo sapiens FIP1L1 protein protein.
Length = 559
Score = 33.1 bits (72), Expect = 1.4
Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 737 PGVFPPGNXPRCXXPVP-XPCPXTRNTPSPLXPFGKPWPLPKAPP 868
P FPPG P P P P P T +T PL P P P APP
Sbjct: 322 PPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGFPPPPGAPP 366
>BC011543-1|AAH11543.1| 328|Homo sapiens FIP1L1 protein protein.
Length = 328
Score = 33.1 bits (72), Expect = 1.4
Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 737 PGVFPPGNXPRCXXPVP-XPCPXTRNTPSPLXPFGKPWPLPKAPP 868
P FPPG P P P P P T +T PL P P P APP
Sbjct: 91 PPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGFPPPPGAPP 135
>AY366510-1|AAQ88277.1| 594|Homo sapiens pre-mRNA 3'end processing
factor FIP1 protein.
Length = 594
Score = 33.1 bits (72), Expect = 1.4
Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 737 PGVFPPGNXPRCXXPVP-XPCPXTRNTPSPLXPFGKPWPLPKAPP 868
P FPPG P P P P P T +T PL P P P APP
Sbjct: 357 PPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGFPPPPGAPP 401
>U77782-1|AAB71624.1| 1236|Homo sapiens N-methyl-D-aspartate receptor
2C subunit precursor protein.
Length = 1236
Score = 31.5 bits (68), Expect = 4.1
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 779 PVPXPCPXTRNTPSPLXPFGKPWPLP 856
P P PCP R+ PSP P P P P
Sbjct: 930 PPPSPCPTPRSGPSPCLPTPDPPPEP 955
>L76224-1|AAA88096.1| 1233|Homo sapiens NMDA receptor protein.
Length = 1233
Score = 31.5 bits (68), Expect = 4.1
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 779 PVPXPCPXTRNTPSPLXPFGKPWPLP 856
P P PCP R+ PSP P P P P
Sbjct: 930 PPPSPCPTPRSGPSPCLPTPDPPPEP 955
>AF110377-1|AAD04629.1| 3859|Homo sapiens PCAF-associated factor 400
protein.
Length = 3859
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 737 PGVFP-PGNXPRCXXPVPXPCPXTRNTPSPLXPFGK 841
PG P P P P P P P T TP+P+ PF K
Sbjct: 494 PGPAPSPAPVPAPPPPPPPPPPATPVTPAPVPPFEK 529
>AF076974-1|AAD09420.1| 3830|Homo sapiens TRRAP protein protein.
Length = 3830
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 737 PGVFP-PGNXPRCXXPVPXPCPXTRNTPSPLXPFGK 841
PG P P P P P P P T TP+P+ PF K
Sbjct: 494 PGPAPSPAPVPAPPPPPPPPPPATPVTPAPVPPFEK 529
>AC004991-1|AAC27675.2| 2089|Homo sapiens unknown protein.
Length = 2089
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 737 PGVFP-PGNXPRCXXPVPXPCPXTRNTPSPLXPFGK 841
PG P P P P P P P T TP+P+ PF K
Sbjct: 494 PGPAPSPAPVPAPPPPPPPPPPATPVTPAPVPPFEK 529
>AB209489-1|BAD92726.1| 3587|Homo sapiens
Transformation/transcription domain-associated protein
variant protein.
Length = 3587
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 737 PGVFP-PGNXPRCXXPVPXPCPXTRNTPSPLXPFGK 841
PG P P P P P P P T TP+P+ PF K
Sbjct: 208 PGPAPSPAPVPAPPPPPPPPPPATPVTPAPVPPFEK 243
>Y11354-1|CAA72189.1| 1083|Homo sapiens subunit of RNA polymerase II
transcription factor protein.
Length = 1083
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = +2
Query: 686 TPQFPXWAKTRXGXFXXPGVFPPGNXPRCXXPVPXPCPXTRNTPSPLXPFGKPWPLPKAP 865
TP F A P P P P P P P T P P P G P P P
Sbjct: 238 TPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARP-PGHPAGPPTAAPAVP 296
Query: 866 P 868
P
Sbjct: 297 P 297
>U41344-1|AAC18782.1| 382|Homo sapiens prolargin protein.
Length = 382
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +2
Query: 752 PGNXPRCXXPVPXPCPXTRNTPSPLXPFGKPWPLPKAPP 868
PG PR P P P P P P P PLP PP
Sbjct: 32 PGRRPR---PRPRPTPSFPQPDEPAEPTDLPPPLPPGPP 67
>U29089-1|AAC50230.1| 382|Homo sapiens proline- arginine-rich end
leucine-rich repeat protein protein.
Length = 382
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +2
Query: 752 PGNXPRCXXPVPXPCPXTRNTPSPLXPFGKPWPLPKAPP 868
PG PR P P P P P P P PLP PP
Sbjct: 32 PGRRPR---PRPRPTPSFPQPDEPAEPTDLPPPLPPGPP 67
>CR542270-1|CAG47066.1| 382|Homo sapiens PRELP protein.
Length = 382
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +2
Query: 752 PGNXPRCXXPVPXPCPXTRNTPSPLXPFGKPWPLPKAPP 868
PG PR P P P P P P P PLP PP
Sbjct: 32 PGRRPR---PRPRPTPSFPQPDEPAEPTDLPPPLPPGPP 67
>CR541787-1|CAG46586.1| 382|Homo sapiens PRELP protein.
Length = 382
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +2
Query: 752 PGNXPRCXXPVPXPCPXTRNTPSPLXPFGKPWPLPKAPP 868
PG PR P P P P P P P PLP PP
Sbjct: 32 PGRRPR---PRPRPTPSFPQPDEPAEPTDLPPPLPPGPP 67
>BC054003-1|AAH54003.1| 1192|Homo sapiens RNASEN protein protein.
Length = 1192
Score = 30.7 bits (66), Expect = 7.2
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +2
Query: 752 PGNXPRCXXPVPXPCPXTRNTPSPLXPFGK-PWPLPKAPP 868
P P C P+P P P N P P P G+ +P PP
Sbjct: 110 PFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPP 149
>BC032498-1|AAH32498.1| 382|Homo sapiens proline/arginine-rich end
leucine-rich repeat protein protein.
Length = 382
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +2
Query: 752 PGNXPRCXXPVPXPCPXTRNTPSPLXPFGKPWPLPKAPP 868
PG PR P P P P P P P PLP PP
Sbjct: 32 PGRRPR---PRPRPTPSFPQPDEPAEPTDLPPPLPPGPP 67
>AY623115-1|AAT38111.1| 1085|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = +2
Query: 686 TPQFPXWAKTRXGXFXXPGVFPPGNXPRCXXPVPXPCPXTRNTPSPLXPFGKPWPLPKAP 865
TP F A P P P P P P P T P P P G P P P
Sbjct: 240 TPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARP-PGHPAGPPTAAPAVP 298
Query: 866 P 868
P
Sbjct: 299 P 299
>AL391817-1|CAI17033.1| 382|Homo sapiens proline/arginine-rich end
leucine-rich repeat protein protein.
Length = 382
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +2
Query: 752 PGNXPRCXXPVPXPCPXTRNTPSPLXPFGKPWPLPKAPP 868
PG PR P P P P P P P PLP PP
Sbjct: 32 PGRRPR---PRPRPTPSFPQPDEPAEPTDLPPPLPPGPP 67
>AL137077-2|CAI11045.1| 1085|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = +2
Query: 686 TPQFPXWAKTRXGXFXXPGVFPPGNXPRCXXPVPXPCPXTRNTPSPLXPFGKPWPLPKAP 865
TP F A P P P P P P P T P P P G P P P
Sbjct: 240 TPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARP-PGHPAGPPTAAPAVP 298
Query: 866 P 868
P
Sbjct: 299 P 299
>AL109911-2|CAI19182.1| 1085|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = +2
Query: 686 TPQFPXWAKTRXGXFXXPGVFPPGNXPRCXXPVPXPCPXTRNTPSPLXPFGKPWPLPKAP 865
TP F A P P P P P P P T P P P G P P P
Sbjct: 240 TPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARP-PGHPAGPPTAAPAVP 298
Query: 866 P 868
P
Sbjct: 299 P 299
>AF189011-1|AAF80558.1| 1374|Homo sapiens ribonuclease III protein.
Length = 1374
Score = 30.7 bits (66), Expect = 7.2
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +2
Query: 752 PGNXPRCXXPVPXPCPXTRNTPSPLXPFGK-PWPLPKAPP 868
P P C P+P P P N P P P G+ +P PP
Sbjct: 110 PFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPP 149
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 30.3 bits (65), Expect = 9.6
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +2
Query: 740 GVFPPGNXPRCXX--PVPXPCPXTRNTPSPLXPFGKPWPLPKAPP 868
G PPG P P P P P + P P PF P P PP
Sbjct: 290 GPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPP 334
Score = 30.3 bits (65), Expect = 9.6
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = +2
Query: 749 PPGNXPRCXXPVPXPCPXTRNTPSPLXPFGKPWPLPKAPP 868
PPG P P P P P P PL P PL APP
Sbjct: 306 PPGPPPPQQGPPPPPGPFPPRPPGPLGP-----PLTLAPP 340
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 30.3 bits (65), Expect = 9.6
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +2
Query: 740 GVFPPGNXPRCXX--PVPXPCPXTRNTPSPLXPFGKPWPLPKAPP 868
G PPG P P P P P + P P PF P P PP
Sbjct: 290 GPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPP 334
Score = 30.3 bits (65), Expect = 9.6
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = +2
Query: 749 PPGNXPRCXXPVPXPCPXTRNTPSPLXPFGKPWPLPKAPP 868
PPG P P P P P P PL P PL APP
Sbjct: 306 PPGPPPPQQGPPPPPGPFPPRPPGPLGP-----PLTLAPP 340
>CR456846-1|CAG33127.1| 202|Homo sapiens PRRG2 protein.
Length = 202
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +2
Query: 791 PCPXTRN--TP-SPLXPFGKPWPLPKAPP 868
PCP +P SPL P G P PLP PP
Sbjct: 142 PCPQEAGLISPLSPLNPLGPPTPLPPPPP 170
>BC026032-1|AAH26032.1| 179|Homo sapiens PRRG2 protein protein.
Length = 179
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +2
Query: 791 PCPXTRN--TP-SPLXPFGKPWPLPKAPP 868
PCP +P SPL P G P PLP PP
Sbjct: 119 PCPQEAGLISPLSPLNPLGPPTPLPPPPP 147
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 30.3 bits (65), Expect = 9.6
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +2
Query: 740 GVFPPGNXPRCXX--PVPXPCPXTRNTPSPLXPFGKPWPLPKAPP 868
G PPG P P P P P + P P PF P P PP
Sbjct: 217 GPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPP 261
Score = 30.3 bits (65), Expect = 9.6
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = +2
Query: 749 PPGNXPRCXXPVPXPCPXTRNTPSPLXPFGKPWPLPKAPP 868
PPG P P P P P P PL P PL APP
Sbjct: 233 PPGPPPPQQGPPPPPGPFPPRPPGPLGP-----PLTLAPP 267
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 30.3 bits (65), Expect = 9.6
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +2
Query: 740 GVFPPGNXPRCXX--PVPXPCPXTRNTPSPLXPFGKPWPLPKAPP 868
G PPG P P P P P + P P PF P P PP
Sbjct: 327 GPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPP 371
Score = 30.3 bits (65), Expect = 9.6
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = +2
Query: 749 PPGNXPRCXXPVPXPCPXTRNTPSPLXPFGKPWPLPKAPP 868
PPG P P P P P P PL P PL APP
Sbjct: 343 PPGPPPPQQGPPPPPGPFPPRPPGPLGP-----PLTLAPP 377
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 30.3 bits (65), Expect = 9.6
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +2
Query: 740 GVFPPGNXPRCXX--PVPXPCPXTRNTPSPLXPFGKPWPLPKAPP 868
G PPG P P P P P + P P PF P P PP
Sbjct: 290 GPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPP 334
Score = 30.3 bits (65), Expect = 9.6
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = +2
Query: 749 PPGNXPRCXXPVPXPCPXTRNTPSPLXPFGKPWPLPKAPP 868
PPG P P P P P P PL P PL APP
Sbjct: 306 PPGPPPPQQGPPPPPGPFPPRPPGPLGP-----PLTLAPP 340
>AF009243-1|AAB67071.1| 202|Homo sapiens proline-rich Gla protein 2
protein.
Length = 202
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +2
Query: 791 PCPXTRN--TP-SPLXPFGKPWPLPKAPP 868
PCP +P SPL P G P PLP PP
Sbjct: 142 PCPQEAGLISPLSPLNPLGPPTPLPPPPP 170
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,857,429
Number of Sequences: 237096
Number of extensions: 1103070
Number of successful extensions: 4185
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 3014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4017
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -