Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_E17
         (887 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0087 - 704715-705347,705423-706349                               30   2.8  
08_02_0818 - 21524539-21524664,21524911-21524961,21525800-215261...    29   6.5  

>03_01_0087 - 704715-705347,705423-706349
          Length = 519

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 17  SHYREFLKILRNYLCIRNFNRKNAEKWR 100
           SHY  F + +R    +R F+R+ A+ WR
Sbjct: 128 SHYGHFWRQVRKLSAVRLFSRRRAQSWR 155


>08_02_0818 -
           21524539-21524664,21524911-21524961,21525800-21526170,
           21526497-21526852,21527926-21527996
          Length = 324

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +1

Query: 343 TLRRHL*NRS-GIKSRMPSTRLSKSPMPTLHPXKKKSMQPRPT 468
           T R H  +R+ G ++R+P  R ++ P P   P ++ S   +P+
Sbjct: 56  TARGHSVHRAQGFEARLPPLRSARLPSPEAEPSRRSSAAEKPS 98


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,645,008
Number of Sequences: 37544
Number of extensions: 412924
Number of successful extensions: 925
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)