Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_E17
(887 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X99667-1|CAA67981.1| 178|Drosophila melanogaster mitochondrial ... 75 2e-13
DQ138650-1|ABA86256.1| 165|Drosophila melanogaster CG6030 protein. 73 7e-13
AY071751-1|AAL49373.2| 190|Drosophila melanogaster RH59211p pro... 73 7e-13
AE014297-2623|AAN13796.1| 178|Drosophila melanogaster CG6030-PB... 73 7e-13
AE014297-2622|AAF55633.1| 178|Drosophila melanogaster CG6030-PA... 73 7e-13
AY118822-1|AAM50682.1| 734|Drosophila melanogaster GH25986p pro... 35 0.13
AE013599-2290|AAF57991.1| 734|Drosophila melanogaster CG7813-PA... 35 0.13
>X99667-1|CAA67981.1| 178|Drosophila melanogaster mitochondrial ATP
synthase protein.
Length = 178
Score = 74.5 bits (175), Expect = 2e-13
Identities = 39/108 (36%), Positives = 59/108 (54%)
Frame = +3
Query: 240 PRLTGLCTNRLYLFLGMVDTFQKQYEALKIPYPADTQTALVESQWNQVKNAIDAFIQESN 419
P++ +L G+VD+FQKQYEALK+PYP D ++ V+++ +N IDA+ + S
Sbjct: 50 PQIDWANYKKLVPVAGLVDSFQKQYEALKVPYPQDKVSSQVDAEIKASQNEIDAYKKASE 109
Query: 420 ANIASXQKEINATKAYXRMXR*XWEDFYDAHPXLALDXIRSQXLXTHS 563
I + QKEI K+ + ED+ DA P ALD + H+
Sbjct: 110 QRIQNYQKEIAHLKSLLPYDQMTMEDYRDAFPDSALDPLNKPTFWPHT 157
Score = 60.1 bits (139), Expect = 4e-09
Identities = 26/45 (57%), Positives = 33/45 (73%)
Frame = +2
Query: 152 PPNKKRTLAAFKIKSDNYLRRVLANPPEPPKINWAVYKQAVPIPG 286
P N+K + AFK KSD Y+R VLANP PP+I+WA YK+ VP+ G
Sbjct: 21 PANQKSSFGAFKTKSDIYVRAVLANPECPPQIDWANYKKLVPVAG 65
Score = 49.2 bits (112), Expect = 8e-06
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = +1
Query: 97 AKRISQSAVNWAALAERVPAEQKAHLGCFQNK 192
A+RI+QS++NW+ALAERVPA QK+ G F+ K
Sbjct: 3 ARRIAQSSINWSALAERVPANQKSSFGAFKTK 34
>DQ138650-1|ABA86256.1| 165|Drosophila melanogaster CG6030 protein.
Length = 165
Score = 72.5 bits (170), Expect = 7e-13
Identities = 38/108 (35%), Positives = 59/108 (54%)
Frame = +3
Query: 240 PRLTGLCTNRLYLFLGMVDTFQKQYEALKIPYPADTQTALVESQWNQVKNAIDAFIQESN 419
P++ +L G+VD+FQKQYEALK+PYP D ++ V+++ ++ IDA+ + S
Sbjct: 43 PQIDWANYKKLVPVAGLVDSFQKQYEALKVPYPQDKVSSQVDAEIKASQSEIDAYKKASE 102
Query: 420 ANIASXQKEINATKAYXRMXR*XWEDFYDAHPXLALDXIRSQXLXTHS 563
I + QKEI K+ + ED+ DA P ALD + H+
Sbjct: 103 QRIQNYQKEIAHLKSLLPYDQMTMEDYRDAFPDSALDPLNKPTFWPHT 150
Score = 60.1 bits (139), Expect = 4e-09
Identities = 26/45 (57%), Positives = 33/45 (73%)
Frame = +2
Query: 152 PPNKKRTLAAFKIKSDNYLRRVLANPPEPPKINWAVYKQAVPIPG 286
P N+K + AFK KSD Y+R VLANP PP+I+WA YK+ VP+ G
Sbjct: 14 PANQKSSFGAFKTKSDIYVRAVLANPECPPQIDWANYKKLVPVAG 58
Score = 42.7 bits (96), Expect = 7e-04
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +1
Query: 112 QSAVNWAALAERVPAEQKAHLGCFQNK 192
QS++NW+ALAERVPA QK+ G F+ K
Sbjct: 1 QSSINWSALAERVPANQKSSFGAFKTK 27
>AY071751-1|AAL49373.2| 190|Drosophila melanogaster RH59211p
protein.
Length = 190
Score = 72.5 bits (170), Expect = 7e-13
Identities = 38/108 (35%), Positives = 59/108 (54%)
Frame = +3
Query: 240 PRLTGLCTNRLYLFLGMVDTFQKQYEALKIPYPADTQTALVESQWNQVKNAIDAFIQESN 419
P++ +L G+VD+FQKQYEALK+PYP D ++ V+++ ++ IDA+ + S
Sbjct: 62 PQIDWANYKKLVPVAGLVDSFQKQYEALKVPYPQDKVSSQVDAEIKASQSEIDAYKKASE 121
Query: 420 ANIASXQKEINATKAYXRMXR*XWEDFYDAHPXLALDXIRSQXLXTHS 563
I + QKEI K+ + ED+ DA P ALD + H+
Sbjct: 122 QRIQNYQKEIAHLKSLLPYDQMTMEDYRDAFPDSALDPLNKPTFWPHT 169
Score = 60.1 bits (139), Expect = 4e-09
Identities = 26/45 (57%), Positives = 33/45 (73%)
Frame = +2
Query: 152 PPNKKRTLAAFKIKSDNYLRRVLANPPEPPKINWAVYKQAVPIPG 286
P N+K + AFK KSD Y+R VLANP PP+I+WA YK+ VP+ G
Sbjct: 33 PANQKSSFGAFKTKSDIYVRAVLANPECPPQIDWANYKKLVPVAG 77
Score = 50.4 bits (115), Expect = 3e-06
Identities = 21/35 (60%), Positives = 28/35 (80%)
Frame = +1
Query: 88 RKMAKRISQSAVNWAALAERVPAEQKAHLGCFQNK 192
R A+RI+QS++NW+ALAERVPA QK+ G F+ K
Sbjct: 12 RMAARRIAQSSINWSALAERVPANQKSSFGAFKTK 46
>AE014297-2623|AAN13796.1| 178|Drosophila melanogaster CG6030-PB,
isoform B protein.
Length = 178
Score = 72.5 bits (170), Expect = 7e-13
Identities = 38/108 (35%), Positives = 59/108 (54%)
Frame = +3
Query: 240 PRLTGLCTNRLYLFLGMVDTFQKQYEALKIPYPADTQTALVESQWNQVKNAIDAFIQESN 419
P++ +L G+VD+FQKQYEALK+PYP D ++ V+++ ++ IDA+ + S
Sbjct: 50 PQIDWANYKKLVPVAGLVDSFQKQYEALKVPYPQDKVSSQVDAEIKASQSEIDAYKKASE 109
Query: 420 ANIASXQKEINATKAYXRMXR*XWEDFYDAHPXLALDXIRSQXLXTHS 563
I + QKEI K+ + ED+ DA P ALD + H+
Sbjct: 110 QRIQNYQKEIAHLKSLLPYDQMTMEDYRDAFPDSALDPLNKPTFWPHT 157
Score = 60.1 bits (139), Expect = 4e-09
Identities = 26/45 (57%), Positives = 33/45 (73%)
Frame = +2
Query: 152 PPNKKRTLAAFKIKSDNYLRRVLANPPEPPKINWAVYKQAVPIPG 286
P N+K + AFK KSD Y+R VLANP PP+I+WA YK+ VP+ G
Sbjct: 21 PANQKSSFGAFKTKSDIYVRAVLANPECPPQIDWANYKKLVPVAG 65
Score = 49.2 bits (112), Expect = 8e-06
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = +1
Query: 97 AKRISQSAVNWAALAERVPAEQKAHLGCFQNK 192
A+RI+QS++NW+ALAERVPA QK+ G F+ K
Sbjct: 3 ARRIAQSSINWSALAERVPANQKSSFGAFKTK 34
>AE014297-2622|AAF55633.1| 178|Drosophila melanogaster CG6030-PA,
isoform A protein.
Length = 178
Score = 72.5 bits (170), Expect = 7e-13
Identities = 38/108 (35%), Positives = 59/108 (54%)
Frame = +3
Query: 240 PRLTGLCTNRLYLFLGMVDTFQKQYEALKIPYPADTQTALVESQWNQVKNAIDAFIQESN 419
P++ +L G+VD+FQKQYEALK+PYP D ++ V+++ ++ IDA+ + S
Sbjct: 50 PQIDWANYKKLVPVAGLVDSFQKQYEALKVPYPQDKVSSQVDAEIKASQSEIDAYKKASE 109
Query: 420 ANIASXQKEINATKAYXRMXR*XWEDFYDAHPXLALDXIRSQXLXTHS 563
I + QKEI K+ + ED+ DA P ALD + H+
Sbjct: 110 QRIQNYQKEIAHLKSLLPYDQMTMEDYRDAFPDSALDPLNKPTFWPHT 157
Score = 60.1 bits (139), Expect = 4e-09
Identities = 26/45 (57%), Positives = 33/45 (73%)
Frame = +2
Query: 152 PPNKKRTLAAFKIKSDNYLRRVLANPPEPPKINWAVYKQAVPIPG 286
P N+K + AFK KSD Y+R VLANP PP+I+WA YK+ VP+ G
Sbjct: 21 PANQKSSFGAFKTKSDIYVRAVLANPECPPQIDWANYKKLVPVAG 65
Score = 49.2 bits (112), Expect = 8e-06
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = +1
Query: 97 AKRISQSAVNWAALAERVPAEQKAHLGCFQNK 192
A+RI+QS++NW+ALAERVPA QK+ G F+ K
Sbjct: 3 ARRIAQSSINWSALAERVPANQKSSFGAFKTK 34
>AY118822-1|AAM50682.1| 734|Drosophila melanogaster GH25986p
protein.
Length = 734
Score = 35.1 bits (77), Expect = 0.13
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 140 LREFPPNKKRTLAAFKIKSDNYLRRVLANPPEPPKINWAVYKQAV 274
+++ PPN+ F K + Y RV P P I+W Y+Q V
Sbjct: 32 MKQVPPNQMHKFKMFAKKHEEYKDRVRKYPESMPTIDWEYYRQNV 76
>AE013599-2290|AAF57991.1| 734|Drosophila melanogaster CG7813-PA
protein.
Length = 734
Score = 35.1 bits (77), Expect = 0.13
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 140 LREFPPNKKRTLAAFKIKSDNYLRRVLANPPEPPKINWAVYKQAV 274
+++ PPN+ F K + Y RV P P I+W Y+Q V
Sbjct: 32 MKQVPPNQMHKFKMFAKKHEEYKDRVRKYPESMPTIDWEYYRQNV 76
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,939,432
Number of Sequences: 53049
Number of extensions: 673324
Number of successful extensions: 1507
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1507
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -