BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_E15
(868 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D29833-1|BAA06213.1| 79|Homo sapiens proline rich peptide P-B ... 34 0.58
BC015327-1|AAH15327.1| 79|Homo sapiens submaxillary gland andr... 34 0.58
AB031740-1|BAA88517.1| 79|Homo sapiens salivary proline-rich p... 34 0.58
AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing ... 32 3.1
AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein. 31 7.2
>D29833-1|BAA06213.1| 79|Homo sapiens proline rich peptide P-B
protein.
Length = 79
Score = 34.3 bits (75), Expect = 0.58
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = +2
Query: 389 GPXXKXXNFPPGXLXPPPXPPXQKXFXXSPPPXXXGXFXXXPXXPK 526
GP F PG + PPP PP PPP G P P+
Sbjct: 33 GPLAPPQPFGPGFVPPPPPPPYGPGRIPPPPPAPYGPGIFPPPPPQ 78
>BC015327-1|AAH15327.1| 79|Homo sapiens submaxillary gland
androgen regulated protein 3 homolog B (mouse) protein.
Length = 79
Score = 34.3 bits (75), Expect = 0.58
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = +2
Query: 389 GPXXKXXNFPPGXLXPPPXPPXQKXFXXSPPPXXXGXFXXXPXXPK 526
GP F PG + PPP PP PPP G P P+
Sbjct: 33 GPLAPPQPFGPGFVPPPPPPPYGPGRIPPPPPAPYGPGIFPPPPPQ 78
>AB031740-1|BAA88517.1| 79|Homo sapiens salivary proline-rich
protein P-B protein.
Length = 79
Score = 34.3 bits (75), Expect = 0.58
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = +2
Query: 389 GPXXKXXNFPPGXLXPPPXPPXQKXFXXSPPPXXXGXFXXXPXXPK 526
GP F PG + PPP PP PPP G P P+
Sbjct: 33 GPLAPPQPFGPGFVPPPPPPPYGPGRIPPPPPAPYGPGIFPPPPPQ 78
>AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing 4
protein.
Length = 1362
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2
Query: 392 PXXKXXNFPPGXLXPPPXPPXQKXFXXSPPP 484
P K + PP L PPP P Q+ PPP
Sbjct: 946 PSVKVQSQPPPPLPPPPHPSVQQQLQQQPPP 976
>AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein.
Length = 1248
Score = 30.7 bits (66), Expect = 7.2
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +2
Query: 416 PPGXLXPPPXPPXQKXFXXSPPPXXXGXFXXXPXXP 523
PP PPP PP SPPP G P P
Sbjct: 600 PPPPPPPPPPPPLPGGTAISPPPPLSGDATIPPPPP 635
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,754,827
Number of Sequences: 237096
Number of extensions: 1314345
Number of successful extensions: 9121
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6262
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -