Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_E15
(868 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.15
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.15
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.15
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 29 5.7
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 7.5
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 28 9.9
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +2
Query: 344 PQXPXXEXXXXNFXGGPXXKXXNFPPGXLXPPPXPPXQKXFXXSPPP 484
P P GGP PPG PPP PP F PPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPP--PPGGCPPPPPPPPPGGFKGGPPP 786
Score = 31.9 bits (69), Expect = 0.61
Identities = 19/62 (30%), Positives = 19/62 (30%), Gaps = 2/62 (3%)
Frame = +2
Query: 344 PQXPXXEXXXXNFXGGPXXKXX--NFPPGXLXPPPXPPXQKXFXXSPPPXXXGXFXXXPX 517
P P GGP PP PPP PP PPP G F P
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Query: 518 XP 523
P
Sbjct: 786 PP 787
Score = 28.7 bits (61), Expect = 5.7
Identities = 25/100 (25%), Positives = 28/100 (28%), Gaps = 7/100 (7%)
Frame = +2
Query: 263 EXKXPIXPPGXKNFFXXTXXXXGGXXTPQX---PXXEXXXXNFXGGPXXKXX--NFPP-- 421
+ K P+ PP N + G P P GGP PP
Sbjct: 680 DPKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPIT 739
Query: 422 GXLXPPPXPPXQKXFXXSPPPXXXGXFXXXPXXPKNXXGG 541
G PPP P PPP P P GG
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +2
Query: 344 PQXPXXEXXXXNFXGGPXXKXXNFPPGXLXPPPXPPXQKXFXXSPPP 484
P P GGP PPG PPP PP F PPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPP--PPGGCPPPPPPPPPGGFKGGPPP 786
Score = 31.9 bits (69), Expect = 0.61
Identities = 19/62 (30%), Positives = 19/62 (30%), Gaps = 2/62 (3%)
Frame = +2
Query: 344 PQXPXXEXXXXNFXGGPXXKXX--NFPPGXLXPPPXPPXQKXFXXSPPPXXXGXFXXXPX 517
P P GGP PP PPP PP PPP G F P
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Query: 518 XP 523
P
Sbjct: 786 PP 787
Score = 28.7 bits (61), Expect = 5.7
Identities = 25/100 (25%), Positives = 28/100 (28%), Gaps = 7/100 (7%)
Frame = +2
Query: 263 EXKXPIXPPGXKNFFXXTXXXXGGXXTPQX---PXXEXXXXNFXGGPXXKXX--NFPP-- 421
+ K P+ PP N + G P P GGP PP
Sbjct: 680 DPKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPIT 739
Query: 422 GXLXPPPXPPXQKXFXXSPPPXXXGXFXXXPXXPKNXXGG 541
G PPP P PPP P P GG
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +2
Query: 344 PQXPXXEXXXXNFXGGPXXKXXNFPPGXLXPPPXPPXQKXFXXSPPP 484
P P GGP PPG PPP PP F PPP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPP--PPGGCPPPPPPPPPGGFKGGPPP 369
Score = 31.9 bits (69), Expect = 0.61
Identities = 19/62 (30%), Positives = 19/62 (30%), Gaps = 2/62 (3%)
Frame = +2
Query: 344 PQXPXXEXXXXNFXGGPXXKXX--NFPPGXLXPPPXPPXQKXFXXSPPPXXXGXFXXXPX 517
P P GGP PP PPP PP PPP G F P
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Query: 518 XP 523
P
Sbjct: 369 PP 370
Score = 28.7 bits (61), Expect = 5.7
Identities = 25/100 (25%), Positives = 28/100 (28%), Gaps = 7/100 (7%)
Frame = +2
Query: 263 EXKXPIXPPGXKNFFXXTXXXXGGXXTPQX---PXXEXXXXNFXGGPXXKXX--NFPP-- 421
+ K P+ PP N + G P P GGP PP
Sbjct: 263 DPKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPIT 322
Query: 422 GXLXPPPXPPXQKXFXXSPPPXXXGXFXXXPXXPKNXXGG 541
G PPP P PPP P P GG
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 416 PPGXLXPPPXPPXQKXFXXSPPP 484
PP PP PP +K SPPP
Sbjct: 23 PPSPRRAPPPPPHRKPASLSPPP 45
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 416 PPGXLXPPPXPPXQKXFXXSPPP 484
PP + PPP PP PPP
Sbjct: 57 PPPPMCPPPPPPPPPPMCPPPPP 79
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 416 PPGXLXPPPXPPXQKXFXXSPPPXXXGXF 502
PP L PPP PP + PPP G +
Sbjct: 89 PPHGLGPPPPPP--HYYTQPPPPPQSGYY 115
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,077,150
Number of Sequences: 27780
Number of extensions: 159888
Number of successful extensions: 1076
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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