Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_E14
(1458 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 36 0.072
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 34 0.29
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 34 0.29
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 32 0.89
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.89
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.89
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 32 1.2
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 31 2.0
U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-li... 31 2.0
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 31 2.0
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 2.0
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 2.7
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 30 3.6
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 30 3.6
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 30 3.6
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 30 3.6
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 30 4.7
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 30 4.7
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 30 4.7
AF098992-4|AAK73869.2| 250|Caenorhabditis elegans Hypothetical ... 30 4.7
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 6.3
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 6.3
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 29 8.3
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 8.3
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 8.3
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 8.3
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 8.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 8.3
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 8.3
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 8.3
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 35.9 bits (79), Expect = 0.072
Identities = 19/43 (44%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +3
Query: 687 GGRXAXGRAXG-RXXGXXXAXXGXXAGGGRXGXXGXAGGGGXG 812
GGR G G R G G GGGR G G GGGG G
Sbjct: 92 GGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGGRG 134
Score = 33.9 bits (74), Expect = 0.29
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +3
Query: 687 GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGG 806
GG GR G G G GGG G G GGGG
Sbjct: 87 GGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGG 126
Score = 33.1 bits (72), Expect = 0.51
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +3
Query: 687 GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGGXG 812
GG G G G G GGGR G G GGGG G
Sbjct: 76 GGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGG 117
Score = 31.1 bits (67), Expect = 2.0
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +3
Query: 687 GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGGXG 812
GG G G G G GGG G G GGG G
Sbjct: 82 GGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGG 123
Score = 30.3 bits (65), Expect = 3.6
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = +3
Query: 687 GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGGXGXXXTPAXTXGGNXR 854
GGR G G GGGR G G GG G G GG R
Sbjct: 66 GGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGR 121
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 33.9 bits (74), Expect = 0.29
Identities = 27/96 (28%), Positives = 29/96 (30%), Gaps = 3/96 (3%)
Frame = +3
Query: 609 PXXPPXPXGCXXPXXAXXP---PXXXXX*GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXG 779
P PP P C P A P P GG G G G GGG G
Sbjct: 59 PVCPP-PQPCPAPPAAYCPQVQPVYVQSGGGGCGGGGCGGGGGGCGGGGGCGGGGGGGCG 117
Query: 780 XXGXAGGGGXGXXXTPAXTXGGNXRXXRTXLXXRAP 887
G G GG G GG+ + AP
Sbjct: 118 GGGGGGCGGGGGGGGGGYASGGSGGFASAPVSLPAP 153
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 33.9 bits (74), Expect = 0.29
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = +3
Query: 687 GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGGXG 812
GGR GR G G GGGR G G GGGG G
Sbjct: 139 GGRGGDGR--GPPGSNGGGDWGGNGGGGRGGGGGRGGGGGGG 178
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 32.3 bits (70), Expect = 0.89
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = +3
Query: 654 AXXPPXXXXX*GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGGXGXXXTPAX 833
A PP G G G G G GGG G G GGGG G
Sbjct: 110 APPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGG 169
Query: 834 TXGG 845
GG
Sbjct: 170 CGGG 173
Score = 30.7 bits (66), Expect = 2.7
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = +3
Query: 663 PPXXXXX*GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGGXG 812
PP GG G G G G GGG G G GGG G
Sbjct: 55 PPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGG 104
Score = 30.7 bits (66), Expect = 2.7
Identities = 23/82 (28%), Positives = 23/82 (28%), Gaps = 1/82 (1%)
Frame = +3
Query: 603 GGPXXPPXPXGCXXPXXAXXPPXXXXX*GGRXAX-GRAXGRXXGXXXAXXGXXAGGGRXG 779
GG PP P C GG G G G G GG G
Sbjct: 107 GGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGG 166
Query: 780 XXGXAGGGGXGXXXTPAXTXGG 845
G GGGG G GG
Sbjct: 167 GGGCGGGGGGGCGGGGGGGCGG 188
Score = 29.9 bits (64), Expect = 4.7
Identities = 23/80 (28%), Positives = 23/80 (28%)
Frame = +3
Query: 603 GGPXXPPXPXGCXXPXXAXXPPXXXXX*GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGX 782
GG PP P C GG G G G G GGG G
Sbjct: 50 GGCAPPPPPPACGGGCGGGG--------GGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGG 101
Query: 783 XGXAGGGGXGXXXTPAXTXG 842
G GGG PA G
Sbjct: 102 GGGCGGGCAPPPPPPACGGG 121
Score = 29.9 bits (64), Expect = 4.7
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +3
Query: 687 GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGGXGXXXTPAXTXGG 845
GG G G G G GGG G G G GG P GG
Sbjct: 68 GGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGG 120
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.89
Identities = 20/53 (37%), Positives = 20/53 (37%)
Frame = +3
Query: 687 GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGGXGXXXTPAXTXGG 845
GG G G G A GGG G G GGGG G PA GG
Sbjct: 31 GGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGG-GCAPPPAPCGGG 82
Score = 30.7 bits (66), Expect = 2.7
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = +3
Query: 633 GCXXPXXAXXPPXXXXX*GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGGXG 812
GC PP GG G G G G GGG G G GGG G
Sbjct: 65 GCGGGGGCAPPPAPCG--GGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGG 122
Query: 813 XXXTPAXTXGG 845
GG
Sbjct: 123 GCGGGGGGCGG 133
Score = 29.9 bits (64), Expect = 4.7
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = +3
Query: 687 GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGGXGXXXTPAXTXGG 845
GG G G G G +GG G G GGGG G + GG
Sbjct: 128 GGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGG 180
Score = 29.5 bits (63), Expect = 6.3
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 750 GXXAGGGRXGXXGXAGGGGXGXXXTPAXTXGG 845
G GGG G G GGG G PA GG
Sbjct: 27 GGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGG 58
Score = 29.5 bits (63), Expect = 6.3
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +3
Query: 687 GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGGXGXXXTPAXTXGG 845
GG G G G G GGG G G GG G G GG
Sbjct: 86 GGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGG 138
Score = 29.1 bits (62), Expect = 8.3
Identities = 18/60 (30%), Positives = 18/60 (30%)
Frame = +3
Query: 633 GCXXPXXAXXPPXXXXX*GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGGXG 812
GC PP G G G A G GGG G G GG G G
Sbjct: 41 GCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGG 100
Score = 29.1 bits (62), Expect = 8.3
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +3
Query: 687 GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGGXG 812
GG G G G G +GG G G GGGG G
Sbjct: 120 GGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGG 161
Score = 29.1 bits (62), Expect = 8.3
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +3
Query: 687 GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGX-AGGGGXG 812
GG + G A G G + G GG G G AGGGG G
Sbjct: 237 GGGGSGGYATGGSSGGGYSSGGSSGGGYSTGGGGGYAGGGGGG 279
Score = 29.1 bits (62), Expect = 8.3
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = +2
Query: 209 APXGGGGXAXXGXXXXXXPRXGPXXRAXXXXRXPXPPXPPAAXXXXXGGAXXEEGXXSXR 388
A GGGG G G A P PP PPA GG E+
Sbjct: 273 AGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGGG 332
Query: 389 G 391
G
Sbjct: 333 G 333
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.89
Identities = 20/53 (37%), Positives = 20/53 (37%)
Frame = +3
Query: 687 GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGGXGXXXTPAXTXGG 845
GG G G G A GGG G G GGGG G PA GG
Sbjct: 31 GGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGG-GCAPPPAPCGGG 82
Score = 30.7 bits (66), Expect = 2.7
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = +3
Query: 633 GCXXPXXAXXPPXXXXX*GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGGXG 812
GC PP GG G G G G GGG G G GGG G
Sbjct: 65 GCGGGGGCAPPPAPCG--GGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGG 122
Query: 813 XXXTPAXTXGG 845
GG
Sbjct: 123 GCGGGGGGCGG 133
Score = 29.9 bits (64), Expect = 4.7
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = +3
Query: 687 GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGGXGXXXTPAXTXGG 845
GG G G G G +GG G G GGGG G + GG
Sbjct: 128 GGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGG 180
Score = 29.5 bits (63), Expect = 6.3
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 750 GXXAGGGRXGXXGXAGGGGXGXXXTPAXTXGG 845
G GGG G G GGG G PA GG
Sbjct: 27 GGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGG 58
Score = 29.5 bits (63), Expect = 6.3
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +3
Query: 687 GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGGXGXXXTPAXTXGG 845
GG G G G G GGG G G GG G G GG
Sbjct: 86 GGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGG 138
Score = 29.1 bits (62), Expect = 8.3
Identities = 18/60 (30%), Positives = 18/60 (30%)
Frame = +3
Query: 633 GCXXPXXAXXPPXXXXX*GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGGXG 812
GC PP G G G A G GGG G G GG G G
Sbjct: 41 GCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGG 100
Score = 29.1 bits (62), Expect = 8.3
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +3
Query: 687 GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGGXG 812
GG G G G G +GG G G GGGG G
Sbjct: 120 GGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGG 161
Score = 29.1 bits (62), Expect = 8.3
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +3
Query: 687 GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGX-AGGGGXG 812
GG + G A G G + G GG G G AGGGG G
Sbjct: 237 GGGGSGGYATGGSSGGGYSSGGSSGGGYSTGGGGGYAGGGGGG 279
Score = 29.1 bits (62), Expect = 8.3
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = +2
Query: 209 APXGGGGXAXXGXXXXXXPRXGPXXRAXXXXRXPXPPXPPAAXXXXXGGAXXEEGXXSXR 388
A GGGG G G A P PP PPA GG E+
Sbjct: 273 AGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGGG 332
Query: 389 G 391
G
Sbjct: 333 G 333
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +3
Query: 687 GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGGXGXXXTP 827
GG GR G G G GG R G G GGG G P
Sbjct: 10 GGGFRGGRGGGGGGGFRGGRGGDRGGGFRGGRGGFGGGGRGGYDQGP 56
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 31.5 bits (68), Expect = 1.5
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +3
Query: 690 GRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGGXGXXXTPAXTXGG 845
G A G GR G + G GGG G G +GG G G + + GG
Sbjct: 46 GASAGGTGGGRGGGRGGSGGGR--GGGSGGGRGGSGGAGAGGSGSGSGGWGG 95
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = +3
Query: 690 GRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGGXGXXXTPAXTXGG 845
G + G + G G G GGR G G GGGG G GG
Sbjct: 13 GGSSGGGSRGGYGGGGRGGGGGGYSGGRGGGYGGGGGGGYGGGGYGGGGRGG 64
Score = 29.1 bits (62), Expect = 8.3
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +3
Query: 687 GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGGXGXXXTPAXTXGGN 848
GG G G G G GG G G GGGG G G N
Sbjct: 17 GGGSRGGYGGGGRGGGGGGYSGGRGGGYGGGGGGGYGGGGYGGGGRGGGRGGSN 70
>U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-like
protein protein32 protein.
Length = 105
Score = 31.1 bits (67), Expect = 2.0
Identities = 19/44 (43%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Frame = +3
Query: 687 GGRXAXGRAXGRXXGXXXAXXGXXAGG-GR-XGXXGXAGGGGXG 812
GGR GR GR G G GG GR G G GGG G
Sbjct: 59 GGRGGWGRGGGRGYGGRGGGWGGRGGGWGRGGGGRGFYGGGRRG 102
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 31.1 bits (67), Expect = 2.0
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +3
Query: 687 GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGGXG 812
GG + G G G G GGG G G GGGG G
Sbjct: 225 GGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYGGGGGGGGYG 266
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.1 bits (67), Expect = 2.0
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -3
Query: 844 PPXVXAGVXXXPXPPPPAXPXXPXRPPPAXXP 749
PP + + P PPPP P PPP P
Sbjct: 565 PPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPP 596
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.7 bits (66), Expect = 2.7
Identities = 20/84 (23%), Positives = 23/84 (27%)
Frame = -3
Query: 811 PXPPPPAXPXXPXRPPPAXXPXXAXXXPXXXXXXXXXXXXXPHXXXXXGGXXAXXGXXQP 632
P PP + P PP + P P + GG A P
Sbjct: 367 PPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPP 426
Query: 631 XGXGGXXGPPXXGXXRXXXXPAXG 560
G G GPP G P G
Sbjct: 427 QGGPGGFGPPPPGGPGAYGPPPTG 450
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 30.3 bits (65), Expect = 3.6
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -3
Query: 844 PPXVXAGVXXXPXPPPPAXPXXPXRPPPAXXPXXAXXXP 728
PP + P PP PA P P P A P A P
Sbjct: 29 PPPPKSASKMGPPPPAPAPPTAPEAAPAAPTPDAAAAAP 67
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 30.3 bits (65), Expect = 3.6
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +3
Query: 690 GRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGGXGXXXTPAXTXGG 845
G A G G G GG G G GGGG G P GG
Sbjct: 192 GGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWGGPQQQQGG 243
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 30.3 bits (65), Expect = 3.6
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +3
Query: 690 GRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGGXGXXXTPAXTXGG 845
G A G G G GG G G GGGG G P GG
Sbjct: 230 GGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWGGPQQQQGG 281
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 30.3 bits (65), Expect = 3.6
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -3
Query: 844 PPXVXAGVXXXPXPPPPAXPXXPXRPPPAXXPXXAXXXP 728
PP + P PP PA P P P A P A P
Sbjct: 29 PPPPKSASKMGPPPPAPAPPTAPEATPAAPAPDAAAAAP 67
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.9 bits (64), Expect = 4.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 811 PXPPPPAXPXXPXRPPPAXXP 749
P PP PA P P PPP P
Sbjct: 111 PPPPAPAAPCCPPPPPPTPSP 131
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 29.9 bits (64), Expect = 4.7
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = +3
Query: 687 GGRXAXGRAXGRXXGXXXAXXGXXA-GGGRXGXXGXAGGGGXG 812
GGR G G G G GGGR G G GGG G
Sbjct: 113 GGRGGNGGGRGGTGGFGDNGGGRGGNGGGRGGNGGGNNGGGRG 155
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 29.9 bits (64), Expect = 4.7
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +3
Query: 687 GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGGXG 812
GG G G G G GG G G GGGG G
Sbjct: 53 GGGGGGGGGGGGGFGGGNGGFGGGGGGNYGGGGGNQGGGGGG 94
>AF098992-4|AAK73869.2| 250|Caenorhabditis elegans Hypothetical
protein F53C3.6a protein.
Length = 250
Score = 29.9 bits (64), Expect = 4.7
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +3
Query: 687 GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGG 806
GGR G GR G GGGR G G GG
Sbjct: 23 GGRGRGGGGGGRGSSGARGGVGGRGGGGRGGGGGGFRSGG 62
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 29.5 bits (63), Expect = 6.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 811 PXPPPPAXPXXPXRPPPAXXP 749
P PPPP P P PP A P
Sbjct: 2 PPPPPPPPPPPPPPPPAASAP 22
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 29.5 bits (63), Expect = 6.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 811 PXPPPPAXPXXPXRPPPAXXP 749
P PPPP P P PP A P
Sbjct: 2 PPPPPPPPPPPPPPPPAASAP 22
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 29.5 bits (63), Expect = 6.3
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = +3
Query: 687 GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGG 806
GGR G G G G GGGR G G GGGG
Sbjct: 306 GGR---GGPMGGRGGFGGDRGGYGGGGGRGGFDGGRGGGG 342
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 29.1 bits (62), Expect = 8.3
Identities = 20/74 (27%), Positives = 20/74 (27%)
Frame = +3
Query: 606 GPXXPPXPXGCXXPXXAXXPPXXXXX*GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXX 785
GP PP P G P PP G G A G G GR G
Sbjct: 144 GPAGPPGPQGNKGPLGPPGPPGPEGPNGTAGNKGPAGPPGPGGKPGPAGPPGENGRNGEP 203
Query: 786 GXAGGGGXGXXXTP 827
G G P
Sbjct: 204 QPGSPGEPGRPGQP 217
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 29.1 bits (62), Expect = 8.3
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +3
Query: 750 GXXAGGGRXGXXGXAGGGGXGXXXTPAXTXGGN 848
G GGG G G GGGG G + GG+
Sbjct: 784 GSSGGGGGGGNGGSGGGGGGGGGGSGGSGGGGS 816
Score = 29.1 bits (62), Expect = 8.3
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Frame = +3
Query: 687 GGRXAXGRAXGRXXGXXXAXXGXXAG--GGRXGXXGXAGGGGXGXXXTPAXTXGGN 848
GG G + G G + G G GG G G GGG G A GN
Sbjct: 800 GGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGDGNGGAGAGNGN 855
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 8.3
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 4/32 (12%)
Frame = -3
Query: 844 PPXVXAGVXXXPXPPP----PAXPXXPXRPPP 761
PP +G+ P PPP P P P PPP
Sbjct: 288 PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP 319
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -3
Query: 844 PPXVXAGVXXXPXPPPPAXPXXPXRPPPAXXP 749
PP PPPP P P PPP P
Sbjct: 125 PPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPP 156
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 8.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 811 PXPPPPAXPXXPXRPPP 761
P PPPP P P PPP
Sbjct: 64 PPPPPPPPPMCPPPPPP 80
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 8.3
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 4/32 (12%)
Frame = -3
Query: 844 PPXVXAGVXXXPXPPP----PAXPXXPXRPPP 761
PP +G+ P PPP P P P PPP
Sbjct: 298 PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP 329
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 29.1 bits (62), Expect = 8.3
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +3
Query: 687 GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGGXG 812
GG G G G G GGG G G GGG G
Sbjct: 85 GGAAVGGGYGGAVGGGGGGGYGGGHGGGHGGAVGGGYGGGGG 126
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.1 bits (62), Expect = 8.3
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = +3
Query: 687 GGRXAXGRAXGRXXGXXXAXXGXXAGGGRXGXXGXAGGGGXGXXXTPAXTXGG 845
GG G G G G GGG G G GGG G P+ GG
Sbjct: 181 GGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDGGYG--PSGGYGG 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.138 0.453
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,916,035
Number of Sequences: 27780
Number of extensions: 194653
Number of successful extensions: 2600
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2021
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4173077878
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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