Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_E12
         (914 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0784 - 11154395-11154888,11155284-11155360,11155447-111554...    29   3.9  
10_08_0213 - 15912048-15912716                                         29   5.2  
10_08_0214 - 15915156-15915713                                         29   6.8  
11_04_0009 - 12132781-12133272                                         28   9.0  

>03_02_0784 -
           11154395-11154888,11155284-11155360,11155447-11155497,
           11155599-11155672,11156127-11156215,11156533-11156618,
           11157570-11157669,11158540-11158622,11158776-11159194
          Length = 490

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = +1

Query: 712 PXXVPXL*PXPXPHPPXPPXALPXXXS 792
           P   P   P P P PP PP ALP   S
Sbjct: 421 PCGPPYAPPPPPPPPPPPPQALPLPGS 447


>10_08_0213 - 15912048-15912716
          Length = 222

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 14/35 (40%), Positives = 15/35 (42%)
 Frame = -1

Query: 800 GXGXXXXGRAXGGXGGWGXGXGYXWGTXXGQDAXA 696
           G G    G   G  GG+G G GY  G   GQ   A
Sbjct: 148 GGGGHGGGGGGGQGGGYGSGSGYGSGRGYGQGGGA 182


>10_08_0214 - 15915156-15915713
          Length = 185

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = -1

Query: 800 GXGXXXXGRAXGGXGGWGXGXGYXWGTXXG 711
           G G    G   GG GG+G G GY  G   G
Sbjct: 112 GSGGGGGGGQGGGAGGYGQGSGYGSGYGSG 141


>11_04_0009 - 12132781-12133272
          Length = 163

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 223 RSSTWAREQRWSCSKPAPERRRRIGSLR 140
           R   W RE+R S  +  P +RRR+G  R
Sbjct: 108 RGEAWRRERRDSKIESRPSQRRRVGGRR 135


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,520,717
Number of Sequences: 37544
Number of extensions: 244897
Number of successful extensions: 1241
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)