BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_E11
(967 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 25 2.6
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 24 7.8
>AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein
protein.
Length = 596
Score = 25.4 bits (53), Expect = 2.6
Identities = 20/53 (37%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = -2
Query: 909 GGXXGVEXXFGXLXXRXGXAXXXXGGGLSPXRXRXG-XGGGGXGXXGGXXRVG 754
GG G + +G R G GGG R R G GGGG G G R G
Sbjct: 55 GGYGGGDDGYGG-GGRGGRGGR--GGGRGRGRGRGGRDGGGGFGGGGYGDRNG 104
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 23.8 bits (49), Expect = 7.8
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +2
Query: 782 PXPPPPXPXLFLXGXSPPP 838
P PPPP P G P P
Sbjct: 784 PPPPPPPPSSLSPGGVPRP 802
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,710
Number of Sequences: 2352
Number of extensions: 6126
Number of successful extensions: 17
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 105241344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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