Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_E11
(967 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 0.93
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.6
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.1
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 2.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.8
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 30 2.8
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 30 2.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.8
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 30 2.8
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 30 2.8
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 3.7
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 29 3.7
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 29 6.5
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 6.5
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 6.5
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 6.5
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 28 8.7
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 28 8.7
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.5 bits (68), Expect = 0.93
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = +2
Query: 773 PXXPXPPPPXPXLFLXGXSPPPXSXXAXPXLXXRXPNXXSTPIXPP 910
P P PPPP P L PPP P + P P+ PP
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPP----PPPPTMSKAPTGVPLPVPPP 1379
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +2
Query: 770 PPXXPXPPPPXPXLFLXGXSPPPXSXXAXPXLXXRXPNXXSTPIXPP 910
PP P PP P +F G PPP P P P PP
Sbjct: 76 PPPGPGGIPPPPPMFAGGIPPPPPMMGGIPP----PPPMFGAPPPPP 118
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = +2
Query: 782 PXPPPPXPXLFLXGXSPPPXSXXAXPXL-XXRXPNXXSTPIXPPA 913
P PPPP G SPPP P R P P+ PP+
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPS 166
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = +2
Query: 755 PTRXXPPXXPX-PPPPXPXL-FLXGXSPPPXSXXAXPXLXXRXPNXXSTPIXPPA 913
P+R PP PPPP P + + G PPP P S P PP+
Sbjct: 322 PSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPS 376
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = +2
Query: 755 PTRXXPPXXPX-PPPPXPXL-FLXGXSPPPXSXXAXPXLXXRXPNXXSTPIXPPA 913
P+R PP PPPP P + + G PPP P S P PP+
Sbjct: 332 PSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPS 386
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 782 PXPPPPXPXLFLXGXSPPPXSXXAXPXLXXRXP 880
P PPPP P + + +PPP P L P
Sbjct: 68 PPPPPPPPLISILQQAPPPPPPPPPPTLKAPPP 100
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/61 (27%), Positives = 21/61 (34%), Gaps = 6/61 (9%)
Frame = +2
Query: 716 RDXTXAVXRAXXXPTRXXPPXX------PXPPPPXPXLFLXGXSPPPXSXXAXPXLXXRX 877
+D + +A P PP P PPPP P L PPP P +
Sbjct: 56 KDPNDNIVKATPPPPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPPILGLKTPSKSLKT 115
Query: 878 P 880
P
Sbjct: 116 P 116
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +2
Query: 755 PTRXXPPXX--PXPPPPXPXLFLXGXSPPP 838
P PP P PPPP P F G PPP
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +2
Query: 755 PTRXXPPXX--PXPPPPXPXLFLXGXSPPP 838
P PP P PPPP P F G PPP
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 770 PPXXPXPPPPXPXLFLXGXSPPPXS 844
PP P PPPP P +PPP S
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPPPSS 26
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 770 PPXXPXPPPPXPXLFLXGXSPPPXS 844
PP P PPPP P +PPP S
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPPPSS 26
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +2
Query: 755 PTRXXPPXX--PXPPPPXPXLFLXGXSPPP 838
P PP P PPPP P F G PPP
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 770 PPXXPXPPPPXPXLFLXGXSPPP 838
P P PPPP P F +PPP
Sbjct: 1009 PGGPPPPPPPPPADFFANIAPPP 1031
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 770 PPXXPXPPPPXPXLFLXGXSPPP 838
P P PPPP P F +PPP
Sbjct: 248 PGGPPPPPPPPPADFFANIAPPP 270
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 770 PPXXPXPPPPXPXLFLXGXSPPPXSXXAXP 859
PP P PPPP P L PP A P
Sbjct: 512 PPPPPPPPPPPPALEQEISGPPTVRLTAVP 541
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 4/52 (7%)
Frame = +2
Query: 755 PTRXXPPXXPXPPPPXPXLFLXGXS----PPPXSXXAXPXLXXRXPNXXSTP 898
PTR PP P PP G S PP + P R PN +P
Sbjct: 436 PTRVAPPPPPSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSP 487
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -2
Query: 858 GXAXXXXGGGLSPXRXRXGXGGGGXGXXGGXXRVG 754
G GGG G GGGG G GG +G
Sbjct: 56 GGGGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIG 90
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -2
Query: 909 GGXXGVEXXFGXLXXRXGXAXXXXGGGLSPXRXRXGXGGGGXGXXGG 769
GG G G G GGG R G GGGG G GG
Sbjct: 213 GGSGGGGGGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYGGG 259
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = +2
Query: 773 PXXPXPPPPXPXLFLXGXSPPPXSXXAXPXLXXRXPNXXSTPIXPP 910
P P PP P L G PPP + + P P T PP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 282
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = +2
Query: 773 PXXPXPPPPXPXLFLXGXSPPPXSXXAXPXLXXRXPNXXSTPIXPP 910
P P PP P L G PPP + + P P T PP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 303
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = +2
Query: 773 PXXPXPPPPXPXLFLXGXSPPPXSXXAXPXLXXRXPNXXSTPIXPP 910
P P PP P L G PPP + + P P T PP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 288
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 4/52 (7%)
Frame = +2
Query: 755 PTRXXPPXXPXPPPPXPXLFLXGXS----PPPXSXXAXPXLXXRXPNXXSTP 898
PTR PP P PP G S PP + P R PN +P
Sbjct: 429 PTRVAPPPPPSAPPTIKFPISTGTSYSSTTPPTTPKPAPPPPSRIPNPSPSP 480
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 755 PTRXXPPXXPXPPPPXP 805
PT PP P PPPP P
Sbjct: 136 PTPAAPPPPPPPPPPAP 152
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,158,168
Number of Sequences: 27780
Number of extensions: 147892
Number of successful extensions: 1187
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 899
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2500474882
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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