Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_E08
(864 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 28 0.13
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 27 0.22
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.8
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.8
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.8
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.8
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.8
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.8
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.8
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.8
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 4.8
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 8.4
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 27.9 bits (59), Expect = 0.13
Identities = 12/55 (21%), Positives = 21/55 (38%)
Frame = -3
Query: 313 DHCRHYLFPEFRFTLFDCGHNHVPRTGRRQSVQATFDTLDSDHIQILCPCVVGAV 149
D C Y + +T DCG P +R Q + + + + P V+ +
Sbjct: 471 DQCEEYEYVHDEYTCMDCGPGKWPHEDKRGCYQLAINHIRWNSAFAIAPAVISCL 525
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 27.1 bits (57), Expect = 0.22
Identities = 12/55 (21%), Positives = 21/55 (38%)
Frame = -3
Query: 313 DHCRHYLFPEFRFTLFDCGHNHVPRTGRRQSVQATFDTLDSDHIQILCPCVVGAV 149
D C Y + +T DCG P +R Q + + + + P V+ +
Sbjct: 561 DQCEEYEYVYDEYTCMDCGPGKWPHEDKRGCYQLAINHIRWNSAFAIAPAVISCL 615
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.8
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = -3
Query: 331 WFPLPDDHC 305
WFP D HC
Sbjct: 117 WFPFDDQHC 125
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.8
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = -3
Query: 331 WFPLPDDHC 305
WFP D HC
Sbjct: 117 WFPFDDQHC 125
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.8
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = -3
Query: 331 WFPLPDDHC 305
WFP D HC
Sbjct: 117 WFPFDDQHC 125
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.8
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = -3
Query: 331 WFPLPDDHC 305
WFP D HC
Sbjct: 117 WFPFDDQHC 125
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.8
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = -3
Query: 331 WFPLPDDHC 305
WFP D HC
Sbjct: 117 WFPFDDQHC 125
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.8
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = -3
Query: 331 WFPLPDDHC 305
WFP D HC
Sbjct: 117 WFPFDDQHC 125
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.8
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = -3
Query: 331 WFPLPDDHC 305
WFP D HC
Sbjct: 185 WFPFDDQHC 193
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.8
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = -3
Query: 331 WFPLPDDHC 305
WFP D HC
Sbjct: 185 WFPFDDQHC 193
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 22.6 bits (46), Expect = 4.8
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -1
Query: 441 LWLQAPVMAEPFISPLLLTMTPALSSKYINTPSRLL 334
+W+ V+ F SP M+P + ++N RLL
Sbjct: 327 IWITVCVLNVHFRSPSTHNMSPWVRQVFLNWMPRLL 362
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.8 bits (44), Expect = 8.4
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -3
Query: 337 SEWFPLPDDHCRHYLFPEFRFTLFD 263
S + PL +DH HY P FD
Sbjct: 195 SAYTPLKEDHDDHYGVPTLEELGFD 219
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,942
Number of Sequences: 438
Number of extensions: 5076
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -