Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_E06
         (876 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   2.1  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   2.8  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    23   4.9  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    23   4.9  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    23   4.9  
M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee homeobox-...    22   8.5  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   8.5  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 718 SCGNGASTVSTPSRDSEDL 662
           SCG G + ++TP  DS+ +
Sbjct: 369 SCGGGPTILTTPGLDSDGI 387


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +2

Query: 707 IATTRHHGQEHSYXEALSGLIIRHESLRQQIFHNW**FI 823
           +A +  H  +H Y E+   +     ++R  IF+ W  F+
Sbjct: 370 VAISYIHDPDHRYLESFGVMGDSATAMRDPIFYRWHAFV 408


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
 Frame = +3

Query: 252 IDTEFSSIRERFDAEMRKMEEEMSKFRSELMNRESNNFFKXXXXXXXXXQHSDSRQLAEP 431
           +D  + +++    A M+K+ E+M+   S +  +   N+ K          ++ S      
Sbjct: 81  LDGWYQTLQSAISAHMKKVREQMAGILSRIPEQGVVNWNK-----IPEGANTTSTTKIID 135

Query: 432 SHWDSLNSPLIQDEGDGKTLKLRFDVSQYTPE-EIVVKTVDNK 557
            H  ++N     D  D  +  +R  V    P+ E ++ TV ++
Sbjct: 136 GHVVTINETTYTDGSDDYSTLIRVRVIDVRPQNETILTTVSSE 178


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
 Frame = +3

Query: 252 IDTEFSSIRERFDAEMRKMEEEMSKFRSELMNRESNNFFKXXXXXXXXXQHSDSRQLAEP 431
           +D  + +++    A M+K+ E+M+   S +  +   N+ K          ++ S      
Sbjct: 81  LDGWYQTLQSAISAHMKKVREQMAGILSRIPEQGVVNWNK-----IPEGANTTSTTKIID 135

Query: 432 SHWDSLNSPLIQDEGDGKTLKLRFDVSQYTPE-EIVVKTVDNK 557
            H  ++N     D  D  +  +R  V    P+ E ++ TV ++
Sbjct: 136 GHVVTINETTYTDGSDDYSTLIRVRVIDVRPQNETILTTVSSE 178


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
 Frame = +3

Query: 252 IDTEFSSIRERFDAEMRKMEEEMSKFRSELMNRESNNFFKXXXXXXXXXQHSDSRQLAEP 431
           +D  + +++    A M+K+ E+M+   S +  +   N+ K          ++ S      
Sbjct: 81  LDGWYQTLQSAISAHMKKVREQMAGILSRIPEQGVVNWNK-----IPEGANTTSTTKIID 135

Query: 432 SHWDSLNSPLIQDEGDGKTLKLRFDVSQYTPE-EIVVKTVDNK 557
            H  ++N     D  D  +  +R  V    P+ E ++ TV ++
Sbjct: 136 GHVVAINETTYTDGSDDYSTLIRVRVIDVRPQNETILTTVSSE 178


>M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H15. ).
          Length = 74

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/38 (21%), Positives = 19/38 (50%)
 Frame = -2

Query: 701 FHGKHTVPGQRRLNXLRICSLGQQKLPVVFSVHRFRIR 588
           FH  H +  +RR+       L ++++ + F   R +++
Sbjct: 27  FHYNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLK 64


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 557 FVVDSLNNDLF 525
           F+VD L NDLF
Sbjct: 96  FIVDRLRNDLF 106


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,172
Number of Sequences: 438
Number of extensions: 4109
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)