Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_E05
         (886 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051963-1|AAK93387.1|  448|Drosophila melanogaster LD43003p pro...    30   4.9  
AE014298-1624|AAS65315.1|  448|Drosophila melanogaster CG1745-PA...    30   4.9  
AE014298-1623|AAF48046.1|  837|Drosophila melanogaster CG1745-PB...    30   4.9  
X75339-1|CAA53089.1|  177|Drosophila melanogaster ribosomal prot...    29   8.5  
AY118524-1|AAM49893.1| 2486|Drosophila melanogaster LD22609p pro...    29   8.5  
AY071222-1|AAL48844.1|  177|Drosophila melanogaster RE26382p pro...    29   8.5  
AE014298-2269|AAF48533.3| 2486|Drosophila melanogaster CG9056-PA...    29   8.5  
AE013599-2503|AAF57838.1|  177|Drosophila melanogaster CG6510-PA...    29   8.5  

>AY051963-1|AAK93387.1|  448|Drosophila melanogaster LD43003p
           protein.
          Length = 448

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = -1

Query: 448 PPDSVDNRITALE*ADTRSPQPNDRAQRVSERGSGRAPKYANRLSPR-VGRFIKCRK 281
           PP S+     +   A  RSP+P  +A+R+S RG    P    R      G  +K R+
Sbjct: 242 PPPSLAKSSESTHSALKRSPKPKIKAKRLSSRGRNTDPDLVKRYGAHFFGCVVKVRR 298


>AE014298-1624|AAS65315.1|  448|Drosophila melanogaster CG1745-PA,
           isoform A protein.
          Length = 448

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = -1

Query: 448 PPDSVDNRITALE*ADTRSPQPNDRAQRVSERGSGRAPKYANRLSPR-VGRFIKCRK 281
           PP S+     +   A  RSP+P  +A+R+S RG    P    R      G  +K R+
Sbjct: 242 PPPSLAKSSESTHSALKRSPKPKIKAKRLSSRGRNTDPDLVKRYGAHFFGCVVKVRR 298


>AE014298-1623|AAF48046.1|  837|Drosophila melanogaster CG1745-PB,
           isoform B protein.
          Length = 837

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = -1

Query: 448 PPDSVDNRITALE*ADTRSPQPNDRAQRVSERGSGRAPKYANRLSPR-VGRFIKCRK 281
           PP S+     +   A  RSP+P  +A+R+S RG    P    R      G  +K R+
Sbjct: 242 PPPSLAKSSESTHSALKRSPKPKIKAKRLSSRGRNTDPDLVKRYGAHFFGCVVKVRR 298


>X75339-1|CAA53089.1|  177|Drosophila melanogaster ribosomal protein
           L18a protein.
          Length = 177

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 357 SLTRCARSFGCGXRVSAHSKAVIRLSTESGG*RRKEHVXQ 476
           ++T+C R  G   R  AHS  +I++ +      R+ HV Q
Sbjct: 105 AVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHVKQ 144


>AY118524-1|AAM49893.1| 2486|Drosophila melanogaster LD22609p
           protein.
          Length = 2486

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 23/74 (31%), Positives = 31/74 (41%)
 Frame = +3

Query: 588 GETRQDYKIPXVSPWXLLVRSPVPTLPLTDTVRLSPFGNVRFSXLTLXVSQFGVGRSLQA 767
           G+T     IP  SP    V    PT P   TV ++P      S   L +       S  A
Sbjct: 149 GKTMAVAAIPPASP----VSISEPTCPSVSTVSMAPSACDFDSDTELSIVAAAAAVSASA 204

Query: 768 GLCAQTPPFNPTAA 809
           G+ +++P   PTAA
Sbjct: 205 GIDSRSPTSPPTAA 218


>AY071222-1|AAL48844.1|  177|Drosophila melanogaster RE26382p
           protein.
          Length = 177

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 357 SLTRCARSFGCGXRVSAHSKAVIRLSTESGG*RRKEHVXQ 476
           ++T+C R  G   R  AHS  +I++ +      R+ HV Q
Sbjct: 105 AVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHVKQ 144


>AE014298-2269|AAF48533.3| 2486|Drosophila melanogaster CG9056-PA
           protein.
          Length = 2486

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 23/74 (31%), Positives = 31/74 (41%)
 Frame = +3

Query: 588 GETRQDYKIPXVSPWXLLVRSPVPTLPLTDTVRLSPFGNVRFSXLTLXVSQFGVGRSLQA 767
           G+T     IP  SP    V    PT P   TV ++P      S   L +       S  A
Sbjct: 149 GKTMAVAAIPPASP----VSISEPTCPSVSTVSMAPSACDFDSDTELSIVAAAAAVSASA 204

Query: 768 GLCAQTPPFNPTAA 809
           G+ +++P   PTAA
Sbjct: 205 GIDSRSPTSPPTAA 218


>AE013599-2503|AAF57838.1|  177|Drosophila melanogaster CG6510-PA
           protein.
          Length = 177

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 357 SLTRCARSFGCGXRVSAHSKAVIRLSTESGG*RRKEHVXQ 476
           ++T+C R  G   R  AHS  +I++ +      R+ HV Q
Sbjct: 105 AVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHVKQ 144


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,585,620
Number of Sequences: 53049
Number of extensions: 813462
Number of successful extensions: 1912
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1912
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)