Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_E05
         (886 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29382-1|AAG00006.1|  382|Caenorhabditis elegans Hypothetical pr...    31   1.4  
L10986-8|AAA28013.2|  286|Caenorhabditis elegans Hypothetical pr...    28   7.7  
AC024801-9|AAF59653.3|  791|Caenorhabditis elegans Hypothetical ...    28   7.7  

>U29382-1|AAG00006.1|  382|Caenorhabditis elegans Hypothetical
           protein R03H10.2 protein.
          Length = 382

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = -2

Query: 495 LAFWLPFGSHVLSCVIPLILWITVLPPWSELIP 397
           + FWL   + +L  V+P+ ++  VL P+S ++P
Sbjct: 150 VVFWLVLATGILYAVVPIHVFTFVLMPYSNMLP 182


>L10986-8|AAA28013.2|  286|Caenorhabditis elegans Hypothetical
           protein F10E9.2 protein.
          Length = 286

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -3

Query: 692 RKADSIRKRQGRNRRAHEEXPGGNXWYLIVLSGFATXDLSVD 567
           RK    + + GR RR H++ P    WY + LS      L  D
Sbjct: 130 RKGSVNKSKSGRTRR-HKKVPDQRLWYFLYLSKPVVVSLPTD 170


>AC024801-9|AAF59653.3|  791|Caenorhabditis elegans Hypothetical
           protein Y50D7A.1 protein.
          Length = 791

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/54 (25%), Positives = 22/54 (40%)
 Frame = +2

Query: 137 ECSEKNALFVKFVMXXXXXXXXXAAINKLTTTIAFILCFRFRGEVWEVFSAFNE 298
           ECS  N  F +             ++ +L + +  I  F   GE+W +F  F E
Sbjct: 392 ECSMPNIEFHQIADVRNEKMIRLVSLGRLRSEVWSIFFFEKVGEIWSIFEHFRE 445


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,745,208
Number of Sequences: 27780
Number of extensions: 381927
Number of successful extensions: 843
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)