Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_E04
         (994 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    28   0.50 
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    26   1.5  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   3.5  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 27.9 bits (59), Expect = 0.50
 Identities = 13/29 (44%), Positives = 13/29 (44%)
 Frame = -3

Query: 890 GPGLPRXGGKAGPRYSG*GRXGFGEXXXG 804
           G G    GG  GP Y G GR G G    G
Sbjct: 533 GAGGMAGGGSDGPEYEGAGRGGVGSGIGG 561


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 20/51 (39%), Positives = 20/51 (39%)
 Frame = -3

Query: 992 GGGGXGXXXPPGXXXGXVRGEMEVXXXGGG*XXXGPGLPRXGGKAGPRYSG 840
           GGGG G     G   G  RG       GGG    G G  R G    P YSG
Sbjct: 65  GGGGRGGRGGRGGGRGRGRGRGG-RDGGGGFGGGGYG-DRNGDGGRPAYSG 113


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.0 bits (52), Expect = 3.5
 Identities = 15/54 (27%), Positives = 18/54 (33%)
 Frame = +1

Query: 826 PXRPYPEYLGPAFPPXRGSPGPXLX*PPPXXXTSISPRTXPXXXPGGXXXPXPP 987
           P +P P   G  +P   G P P     PP     + P   P   P       PP
Sbjct: 206 PTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQP-RPPSAQGMQRPP 258


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 583,524
Number of Sequences: 2352
Number of extensions: 7625
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 108941235
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)