SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_E02
         (894 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96; Eukary...   128   2e-28
UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S riboso...   115   1e-24
UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa...   105   2e-21
UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein...   104   3e-21
UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=...    84   4e-15
UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;...    77   6e-13
UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92; Euka...    75   2e-12
UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, wh...    69   2e-10
UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2; T...    68   4e-10
UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2; ...    63   8e-09
UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga ...    54   4e-06
UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1; Sulfol...    50   6e-05
UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera...    47   6e-04
UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17; Archa...    47   6e-04
UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum...    44   0.004
UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lambl...    44   0.005
UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1; Os...    43   0.009
UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14; Archa...    42   0.021
UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1; Encepha...    41   0.049
UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome sh...    36   1.1  
UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole gen...    36   1.1  
UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus Nit...    36   1.4  
UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillar...    35   3.2  
UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9; Euryar...    34   4.3  

>UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96;
           Eukaryota|Rep: 60S ribosomal protein L26 - Homo sapiens
           (Human)
          Length = 145

 Score =  128 bits (308), Expect = 2e-28
 Identities = 57/80 (71%), Positives = 71/80 (88%)
 Frame = +2

Query: 44  LRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKA 223
           +RGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK 
Sbjct: 58  VRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKK 117

Query: 224 ILDRRAKGRLAALGKDKGKY 283
           IL+R+AK R   +GK+KGKY
Sbjct: 118 ILERKAKSR--QVGKEKGKY 135


>UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S ribosomal
           protein L26 (Silica-induced gene 20 protein) (SIG-20);
           n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: similar to
           60S ribosomal protein L26 (Silica-induced gene 20
           protein) (SIG-20) - Homo sapiens
          Length = 127

 Score =  115 bits (277), Expect = 1e-24
 Identities = 52/80 (65%), Positives = 67/80 (83%)
 Frame = +2

Query: 44  LRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKA 223
           +RGHYKGQQ+G V+QVYRKK+V+YIE +Q+EKANG T +VGIHPSK VI +LK++KDRK 
Sbjct: 40  VRGHYKGQQIGTVVQVYRKKYVIYIEWVQQEKANGTTVHVGIHPSKAVITRLKLDKDRKK 99

Query: 224 ILDRRAKGRLAALGKDKGKY 283
           I +++AK   A  GK+KGKY
Sbjct: 100 IPEQKAKSHQA--GKEKGKY 117


>UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa
           (japonica cultivar-group)|Rep: Os11g0151300 protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 163

 Score =  105 bits (252), Expect = 2e-21
 Identities = 50/80 (62%), Positives = 66/80 (82%)
 Frame = +2

Query: 44  LRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKA 223
           +RG YKG++ GKV+QVYR+++V+++ERI REK NG+T  VGIHPSK V+ KLK++KDRKA
Sbjct: 68  VRGSYKGRE-GKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKA 126

Query: 224 ILDRRAKGRLAALGKDKGKY 283
           ILDR+A GR  A  K KGK+
Sbjct: 127 ILDRKASGR--AADKAKGKF 144


>UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein
           L26 (Silica-induced gene 20 protein) (SIG-20)
           (LOC668913), mRNA; n=2; Eutheria|Rep: similar to 60S
           ribosomal protein L26 (Silica-induced gene 20 protein)
           (SIG-20) (LOC668913), mRNA - Mus musculus
          Length = 139

 Score =  104 bits (250), Expect = 3e-21
 Identities = 49/80 (61%), Positives = 66/80 (82%)
 Frame = +2

Query: 44  LRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKA 223
           +RGHY+GQQ+GKV+QVYRKK+V+YI++++REKANG T  VGIHPSK VI +LK+ +DRK 
Sbjct: 58  VRGHYEGQQIGKVVQVYRKKYVIYIKQVEREKANGTTVRVGIHPSKVVITRLKL-EDRKK 116

Query: 224 ILDRRAKGRLAALGKDKGKY 283
           IL+R+       +GK+KGKY
Sbjct: 117 ILERK-------VGKEKGKY 129


>UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=9;
           Eukaryota|Rep: 60S ribosomal protein L26, putative -
           Plasmodium vivax
          Length = 156

 Score = 84.2 bits (199), Expect = 4e-15
 Identities = 35/65 (53%), Positives = 53/65 (81%)
 Frame = +2

Query: 47  RGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAI 226
           RGH  G++ GKV+++ RK+F +Y+ER+ REKANG + ++GIHPS  ++ KLK++K+RK I
Sbjct: 88  RGHNHGRE-GKVVKINRKRFKIYVERVTREKANGESTFIGIHPSNVILTKLKIDKNRKKI 146

Query: 227 LDRRA 241
           LDR+A
Sbjct: 147 LDRKA 151


>UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;
           Trichocomaceae|Rep: Contig An11c0300, complete genome -
           Aspergillus niger
          Length = 134

 Score = 77.0 bits (181), Expect = 6e-13
 Identities = 37/75 (49%), Positives = 53/75 (70%)
 Frame = +2

Query: 44  LRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKA 223
           +RG  KG++ GKV  VYR K+ +++ERI R+K+NG +  + +HPS  VI KL ++KDR+A
Sbjct: 59  VRGSNKGRE-GKVTSVYRLKWAIHVERISRDKSNGQSVPIPLHPSNVVIKKLHLDKDREA 117

Query: 224 ILDRRAKGRLAALGK 268
           IL+R  KGR A   K
Sbjct: 118 ILERVGKGREAVKAK 132


>UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92;
           Eukaryota|Rep: 60S ribosomal protein L26-A -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 127

 Score = 74.9 bits (176), Expect = 2e-12
 Identities = 34/70 (48%), Positives = 51/70 (72%)
 Frame = +2

Query: 44  LRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKA 223
           +RG  KGQ+ GK+  VYR KF V ++++ +EK NGA+  + +HPSK VI KL ++KDRKA
Sbjct: 59  VRGSKKGQE-GKISSVYRLKFAVQVDKVTKEKVNGASVPINLHPSKLVITKLHLDKDRKA 117

Query: 224 ILDRRAKGRL 253
           ++ R+  G+L
Sbjct: 118 LIQRKG-GKL 126


>UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, whole
           genome shotgun sequence; n=4; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_11,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 144

 Score = 68.9 bits (161), Expect = 2e-10
 Identities = 32/75 (42%), Positives = 50/75 (66%)
 Frame = +2

Query: 44  LRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKA 223
           +RG +KG + GKV  VYRK++ + IE++ R KANG    + I  S+C+I K  +N+DRK 
Sbjct: 58  VRGTHKGTK-GKVSSVYRKRWTIQIEKLTRTKANGMPYQIPIRASQCIITKPYLNEDRKQ 116

Query: 224 ILDRRAKGRLAALGK 268
           +L R+A  +++  GK
Sbjct: 117 LLARKASAKVSTKGK 131


>UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2;
           Trichomonas vaginalis G3|Rep: Ribosomal protein L24,
           putative - Trichomonas vaginalis G3
          Length = 138

 Score = 67.7 bits (158), Expect = 4e-10
 Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
 Frame = +2

Query: 50  GHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAIL 229
           G + G++ GKV+ V   +  + ++   REK NG T +V +HPS C+I KLKM+K RK ++
Sbjct: 61  GKFAGRE-GKVIAVKLSENRIVVDSFTREKLNGQTVHVSVHPSNCLITKLKMDKQRKELI 119

Query: 230 DRRAKGR---LAALGKDK 274
           +RR  GR   LA LG +K
Sbjct: 120 ERRRAGREKILAKLGHNK 137


>UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2;
           Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
           protein L26 - Entamoeba histolytica HM-1:IMSS
          Length = 213

 Score = 63.3 bits (147), Expect = 8e-09
 Identities = 31/69 (44%), Positives = 45/69 (65%)
 Frame = +2

Query: 44  LRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKA 223
           ++GH K    GKV  V R K+V+ I+++ + KANG T  V I PS  +I KL +NKDR+A
Sbjct: 58  IKGHQK--VAGKVTAVRRSKYVINIDKLTKTKANGQTVPVAIRPSNVIITKLFLNKDREA 115

Query: 224 ILDRRAKGR 250
            L ++A+ R
Sbjct: 116 YLAKKAESR 124


>UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga
           maquilingensis IC-167|Rep: Ribosomal protein L24 -
           Caldivirga maquilingensis IC-167
          Length = 143

 Score = 54.4 bits (125), Expect = 4e-06
 Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
 Frame = +2

Query: 44  LRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKL-KMNKDRK 220
           LRG +KG + GKV +V  K+  +Y++    +K +G   Y  IHPSK VIV+L + +K R 
Sbjct: 57  LRGDFKGTR-GKVTRVDYKRVRIYVDSASFKKPSGEAVYYPIHPSKVVIVELDQSDKARV 115

Query: 221 AILDRRAKGRLAALG 265
           A +D+  K R A  G
Sbjct: 116 AAIDKTRKAREAKAG 130


>UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1;
           Sulfolobus acidocaldarius|Rep: 50S ribosomal protein
           L24P - Sulfolobus acidocaldarius
          Length = 134

 Score = 50.4 bits (115), Expect = 6e-05
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
 Frame = +2

Query: 44  LRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKM-NKDRK 220
           +RG   G + GKV++V RK+  V IE + ++KA+G   YV +H SK +I KL   +K+R 
Sbjct: 53  MRGSQVGYE-GKVVEVDRKRGRVAIEGLTKKKADGTPVYVWVHASKVIITKLDTGDKERM 111

Query: 221 AILDRRAKGRLAALGKDKGK 280
             ++R+ K R     K   K
Sbjct: 112 DAIERKRKMREEYFSKKSPK 131


>UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera
           sedula DSM 5348|Rep: KOW domain protein - Metallosphaera
           sedula DSM 5348
          Length = 111

 Score = 47.2 bits (107), Expect = 6e-04
 Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
 Frame = +2

Query: 44  LRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKD-RK 220
           +RG   G + GKV QV+ +   + IE + R+KA+G   Y+ IH SK  I KL  N   RK
Sbjct: 34  MRGDNYGFE-GKVTQVFPESGRIAIEGLTRKKADGTPVYIKIHASKVEITKLNTNDPRRK 92

Query: 221 AILDRRA 241
            I++R+A
Sbjct: 93  DIINRKA 99


>UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17;
           Archaea|Rep: 50S ribosomal protein L24P - Methanopyrus
           kandleri
          Length = 149

 Score = 47.2 bits (107), Expect = 6e-04
 Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
 Frame = +2

Query: 44  LRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKD-RK 220
           +RG +KG + G+V++V  K+  +Y+E    E+ANG   Y  IHPS  +I++  ++   R+
Sbjct: 56  MRGDFKGHE-GEVVEVDLKRLRIYVEGATIERANGEKVYYPIHPSNVMIIEPNLDDPMRR 114

Query: 221 AILDR 235
            I++R
Sbjct: 115 KIIER 119


>UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum
           pendens Hrk 5|Rep: Ribosomal protein L24 - Thermofilum
           pendens (strain Hrk 5)
          Length = 131

 Score = 44.4 bits (100), Expect = 0.004
 Identities = 25/67 (37%), Positives = 37/67 (55%)
 Frame = +2

Query: 44  LRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKA 223
           +RG +KG + GKV  V  KK  +++E     KA+G      IHPSK V+ +L ++  R+ 
Sbjct: 57  VRGSFKGHE-GKVTSVDVKKGRIHVEGATLRKADGTEVPFPIHPSKVVVTELDLSDPRRK 115

Query: 224 ILDRRAK 244
            L  R K
Sbjct: 116 ELVERKK 122


>UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_111_22147_22554 - Giardia lamblia
           ATCC 50803
          Length = 135

 Score = 44.0 bits (99), Expect = 0.005
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
 Frame = +2

Query: 50  GHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVG--IHPSKCVIVKLKMNKDRKA 223
           G +KG   GKV++V R+ + + +E I ++  N     V   IHPS C+I +L MN  R  
Sbjct: 60  GGHKG--TGKVVEVRRRDYKICVEGINQKARNPEAKPVPYPIHPSNCIIKELYMNGSRYR 117

Query: 224 ILDRRAK---GRLAALGK 268
            + RR +    RLA +GK
Sbjct: 118 AIKRRQERNAERLARIGK 135


>UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1;
           Ostreococcus tauri|Rep: Putative L24 ribosomal protein -
           Ostreococcus tauri
          Length = 154

 Score = 43.2 bits (97), Expect = 0.009
 Identities = 19/34 (55%), Positives = 27/34 (79%)
 Frame = +2

Query: 47  RGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 148
           RG +K ++ GKV+QVYRKK+V++I  I R+K NG
Sbjct: 78  RGSFKNRE-GKVVQVYRKKWVIHIANITRDKVNG 110


>UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14;
           Archaea|Rep: 50S ribosomal protein L24P - Methanococcus
           jannaschii
          Length = 120

 Score = 41.9 bits (94), Expect = 0.021
 Identities = 21/59 (35%), Positives = 37/59 (62%)
 Frame = +2

Query: 44  LRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRK 220
           +RG +KG + G+V++V  K++ +Y+E    ++ +G      IHPS  +I+KL  +KD K
Sbjct: 56  MRGDFKGLE-GEVIKVDLKRYRIYVEGANNKRQDGREVPYPIHPSNVMIIKL-YDKDEK 112


>UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1;
           Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L26
           - Encephalitozoon cuniculi
          Length = 143

 Score = 40.7 bits (91), Expect = 0.049
 Identities = 22/67 (32%), Positives = 36/67 (53%)
 Frame = +2

Query: 50  GHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAIL 229
           G + G++ G + ++  + + VYIE     K +G  A V I+PSK  I K  +   RK  L
Sbjct: 61  GKFDGKE-GVISKINYRDYKVYIEGCFVTKNDGTNALVPIYPSKLTITKFFLENGRKEQL 119

Query: 230 DRRAKGR 250
           +R+ + R
Sbjct: 120 ERKKRAR 126


>UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome shotgun
            sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 2
            SCAF14705, whole genome shotgun sequence - Tetraodon
            nigroviridis (Green puffer)
          Length = 2759

 Score = 36.3 bits (80), Expect = 1.1
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = -2

Query: 326  YLFKRPPWLWQFPRCIYPCLCQVQPVCPLLCDRGLLCG 213
            YL   P W W FP    P L ++Q +CP   DR L CG
Sbjct: 2559 YLMNNPSWSWVFP----PDLLRLQRMCPEKMDRFLCCG 2592


>UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole genome
           shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
           chr1 scaffold_136, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 119

 Score = 36.3 bits (80), Expect = 1.1
 Identities = 16/32 (50%), Positives = 26/32 (81%)
 Frame = +2

Query: 44  LRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 139
           +RG +KG++ GKV+QVY +K V++++RI  EK
Sbjct: 76  VRGTFKGRE-GKVVQVYCQKRVIHVKRISHEK 106


>UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus
           Nitrosopumilus maritimus SCM1|Rep: KOW domain protein -
           Candidatus Nitrosopumilus maritimus SCM1
          Length = 168

 Score = 35.9 bits (79), Expect = 1.4
 Identities = 21/52 (40%), Positives = 28/52 (53%)
 Frame = +2

Query: 44  LRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKL 199
           LRG +KG   GKV +V   K  V IE +++EK  G    V IH S  ++  L
Sbjct: 51  LRGEFKGVD-GKVAEVSTAKSSVAIEGVKKEKTKGDKFDVFIHTSNLLVTSL 101


>UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillardia
           theta|Rep: 60S ribosomal protein L26 - Guillardia theta
           (Cryptomonas phi)
          Length = 108

 Score = 34.7 bits (76), Expect = 3.2
 Identities = 16/51 (31%), Positives = 30/51 (58%)
 Frame = +2

Query: 47  RGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKL 199
           RG +KG+  GKV+Q+  ++  ++++ I R K      +V + PS   I+K+
Sbjct: 59  RGDFKGK-TGKVIQIKPEQQKIFVDNIFRNKFEKTNIFVPLKPSNIQIIKI 108


>UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9;
           Euryarchaeota|Rep: 50S ribosomal protein L24P -
           Methanosarcina mazei (Methanosarcina frisia)
          Length = 122

 Score = 34.3 bits (75), Expect = 4.3
 Identities = 19/60 (31%), Positives = 31/60 (51%)
 Frame = +2

Query: 44  LRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKA 223
           +RG +KG + GKV  V      + ++ +   K +G      I+PS  +I KL+M   R+A
Sbjct: 59  MRGDFKGTE-GKVQSVSLMDGTIAVDGVISTKVDGTEVPRPINPSNVMITKLEMKDGRRA 117


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,819,448
Number of Sequences: 1657284
Number of extensions: 12351399
Number of successful extensions: 26620
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26405
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80751996367
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -