Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_D24
         (881 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   2.4  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   5.5  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   7.3  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   9.7  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   9.7  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   9.7  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/34 (32%), Positives = 11/34 (32%)
 Frame = +3

Query: 771 PPXXPXPPPXPPPPXXXALXPXSPLXPXXPXHPP 872
           PP    P P    P        SP  P  P  PP
Sbjct: 72  PPKREIPSPKRSSPILAEKVSVSPTTPPTPSPPP 105



 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +3

Query: 783 PXPPPXPPPPXXXALXP 833
           P  PP P PP    L P
Sbjct: 95  PTTPPTPSPPPEERLTP 111


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +3

Query: 801 PPPPXXXALXPXSPLXPXXPXHPPPP 878
           PPP    A  P S      P   PPP
Sbjct: 11  PPPAPQSAATPISSSGMTSPAAAPPP 36


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +1

Query: 775 PPXPXPPPXPPP 810
           PP P P P P P
Sbjct: 392 PPEPVPTPEPQP 403


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +3

Query: 129 PKPXKXQXKWVLKSQGKXGPNXXP 200
           P P +   +W+ K+  +  PN  P
Sbjct: 117 PPPARSPYEWIKKTSYQSQPNPEP 140


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +3

Query: 129 PKPXKXQXKWVLKSQGKXGPNXXP 200
           P P +   +W+ K+  +  PN  P
Sbjct: 117 PPPARSPYEWIKKTSYQSQPNPEP 140


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 775 PPXPXPPPXPP 807
           PP P PP  PP
Sbjct: 181 PPLPLPPIFPP 191


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,185
Number of Sequences: 336
Number of extensions: 2466
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)