Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_D24
(881 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 36 0.008
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 35 0.013
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 33 0.054
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.094
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.12
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 0.15
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.50
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.50
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 29 1.2
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 2.7
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 23 2.8
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 27 3.5
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 3.5
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 27 4.7
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 4.7
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 27 4.7
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 35.9 bits (79), Expect = 0.008
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = +3
Query: 771 PPXXPXPPPXPPPPXXXALXPXSPLXPXXPXHPPPPP 881
PP P P PPPP P +P P P PPPP
Sbjct: 1699 PPQMSAPTP-PPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +3
Query: 771 PPXXPXPPPXPPPPXXXALXPXSP 842
PP PP PPPP + P P
Sbjct: 1721 PPMPAGPPSAPPPPLPASSAPSVP 1744
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.1 bits (77), Expect = 0.013
Identities = 19/70 (27%), Positives = 21/70 (30%)
Frame = +3
Query: 672 PPPPPPXXPGXXXXXXXXXXXXXXXXXXXXXXXPPXXPXPPPXPPPPXXXALXPXSPLXP 851
PP PPP PG P P PP PP +L +P P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 852 XXPXHPPPPP 881
P P P
Sbjct: 448 PLPPSAPIAP 457
Score = 33.1 bits (72), Expect = 0.054
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +3
Query: 792 PPXPPPPXXXALXPXSPLXPXXPXHPPPPP 881
PP PPPP A PL P PPPPP
Sbjct: 337 PPPPPPPRSNAAGSI-PLPPQGRSAPPPPP 365
Score = 30.7 bits (66), Expect = 0.29
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +3
Query: 771 PPXXPXPPPXPPPPXXXALXPXSPLXPXXPXHPPPPP 881
P P PP P P A P +P P PPP P
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 30.7 bits (66), Expect = 0.29
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = +3
Query: 771 PPXXPXPPPXPP-PPXXXALXPXSPLXPXXPXHPPPPP 881
PP P P PP P A P P P P P P P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 29.9 bits (64), Expect = 0.50
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = +1
Query: 637 PPAPPSXRXXXXPPPPPPXXPAXTXXXXXXXXXXXXXXXXXXXXXXPPXPXPPPXPPPXP 816
PP S R PP PPP P + PP P PP PP P
Sbjct: 376 PPPLSSSRAVSNPPAPPPAIPGRS-------APALPPLGNASRTSTPPVPTPPSLPPSAP 428
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 789 PPPXPPPPXXXALXPXSPLXPXXPXHPPPPP 881
PPP PP P P P PPPPP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAP--PPPPP 366
Score = 27.5 bits (58), Expect = 2.7
Identities = 16/61 (26%), Positives = 17/61 (27%), Gaps = 1/61 (1%)
Frame = +1
Query: 637 PPAPPSXRXXXXPPPPPPXXP-AXTXXXXXXXXXXXXXXXXXXXXXXPPXPXPPPXPPPX 813
PP+ P PP PP P PP P P PPP
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPA 479
Query: 814 P 816
P
Sbjct: 480 P 480
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = +3
Query: 783 PXPPPXPPPP-XXXALXPXSPLXPXXPXHPPP 875
P PPP PPP + P SP P P P
Sbjct: 251 PAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNP 282
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +3
Query: 771 PPXXPXPPPXPPPPXXXALXPXSPL 845
P P PP P PP A P +P+
Sbjct: 464 PAAPPLPPAAPAPPPAPAPAPAAPV 488
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 33.1 bits (72), Expect = 0.054
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -2
Query: 880 GGGGGWXGXXGXRGEXGXSAXXXGGGGXGGGXGXXGG 770
G GG G G RG G GGG GG G GG
Sbjct: 13 GSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGG 49
Score = 31.9 bits (69), Expect = 0.12
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -2
Query: 880 GGGGGWXGXXGXRGEXGXSAXXXGGGGXGGGXGXXGG 770
GG GG+ G G G G GG GG G GG
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = -2
Query: 874 GGGWXGXXGXRGEXGXSAXXXGGGGXGGGXGXXGG 770
GGG G G RG G A GG GG G GG
Sbjct: 37 GGGRGGARGGRGGRG-GARGGRGGSSGGRGGAKGG 70
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 880 GGGGGWXGXXGXRGEXGXSAXXXGGGGXGGGXGXXGG 770
G GG G G G G GG GG G GG
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGG 46
Score = 26.2 bits (55), Expect = 6.2
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -2
Query: 880 GGGGGWXGXXGXRGEXGXSAXXXGGGGXGGGXGXXGG 770
G GGG G G G G G GG GG G G
Sbjct: 27 GFGGGRGGARGG-GRGGARGGRGGRGGARGGRGGSSG 62
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 32.3 bits (70), Expect = 0.094
Identities = 18/39 (46%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = -2
Query: 880 GGGGGWXGXXGXRGEXGXSAXXXGG--GGXGGGXGXXGG 770
G GGG G G G G GG GG GGG G GG
Sbjct: 225 GFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGG 263
Score = 28.3 bits (60), Expect = 1.5
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = -2
Query: 880 GGGGGWXGXXGXRGEXGXSAXXXGGGGXGGGXGXXGG 770
G GGG G G G G G GG GGG G GG
Sbjct: 239 GFGGGPGGFGGGLGGFG-----GGPGGFGGGPGGHGG 270
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.9 bits (69), Expect = 0.12
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 637 PPAPPSXRXXXXPPPPPPXXPA 702
PP PP PPPPPP PA
Sbjct: 763 PPPPPPGVAGAGPPPPPPPPPA 784
Score = 31.5 bits (68), Expect = 0.16
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Frame = +3
Query: 771 PPXXPX---PPPXPPPPXXXALXPXSPLXPXXPXHPPPPP 881
PP P PPP PPPP P P PPPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPP--------PPPPP 783
Score = 31.1 bits (67), Expect = 0.22
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 771 PPXXPXPPPXPPPPXXXALXPXSPLXPXXPXHPPPPP 881
P P P P PPP P P P PPPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 29.5 bits (63), Expect = 0.66
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Frame = +3
Query: 789 PPPXPP----PPXXXALXPXSPLXPXXPXHPPPPP 881
PPP PP P A P P P PPPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +3
Query: 771 PPXXPXPPPXPPPPXXXALXPXSPLXPXXPXHPPPP 878
PP P P P + P +P+ P PPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 771 PPXXPXPPPXPPPPXXXALXPXSPLXPXXPXHPPPPP 881
P P P P PP P P P PPPPP
Sbjct: 744 PAPAPIPVP-PPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 27.1 bits (57), Expect = 3.5
Identities = 19/72 (26%), Positives = 20/72 (27%), Gaps = 4/72 (5%)
Frame = +3
Query: 672 PPPPPPXX--PGXXXXXXXXXXXXXXXXXXXXXXXPPXXPX--PPPXPPPPXXXALXPXS 839
PPPPPP P PP PPP PPPP +
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSR 791
Query: 840 PLXPXXPXHPPP 875
P P P
Sbjct: 792 YYAPAPQAEPEP 803
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 637 PPAPPSXRXXXXPPPPPPXXP 699
PP PP PPPPP P
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPP 782
Score = 26.2 bits (55), Expect = 6.2
Identities = 20/74 (27%), Positives = 20/74 (27%), Gaps = 6/74 (8%)
Frame = +3
Query: 675 PPPPPXXPGXXXXXXXXXXXXXXXXXXXXXXXPPXXPXP------PPXPPPPXXXALXPX 836
PPPPP P PP P P PP PPPP
Sbjct: 732 PPPPP--PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Query: 837 SPLXPXXPXHPPPP 878
S P P P
Sbjct: 790 SRYYAPAPQAEPEP 803
Score = 26.2 bits (55), Expect = 6.2
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1
Query: 640 PAPPSXRXXXXPPPPPP 690
P PP PPPPPP
Sbjct: 750 PVPPPAPIMGGPPPPPP 766
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 789 PPPXPPPPXXXALXPXSPLXPXXPXHPPPPP 881
PPP PP A P P PPPPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 27.5 bits (58), Expect = 2.7
Identities = 17/59 (28%), Positives = 17/59 (28%), Gaps = 3/59 (5%)
Frame = +3
Query: 672 PPPPPPXXPGXXXXXXXXXXXXXXXXXXXXXXXPPXXPX---PPPXPPPPXXXALXPXS 839
PPPPPP P P P P PPPP L P S
Sbjct: 192 PPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPPTLPPQS 250
Score = 25.4 bits (53), Expect(2) = 0.15
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 778 PXPXPPPXPPP 810
P P PPP PPP
Sbjct: 234 PLPAPPPPPPP 244
Score = 24.6 bits (51), Expect(2) = 0.15
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 673 PPPPPPXXPA 702
PPPPPP PA
Sbjct: 189 PPPPPPPPPA 198
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.9 bits (64), Expect = 0.50
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 637 PPAPPSXRXXXXPPPPPP 690
PP PP PPPPPP
Sbjct: 12 PPPPPGFEPPSQPPPPPP 29
Score = 27.1 bits (57), Expect = 3.5
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 771 PPXXPXPPPXPPPPXXXALXPXSPLXPXXPXHPPPP 878
PP P PPP PP P P P PPPP
Sbjct: 5 PPGNPPPPPPPP-----GFEP-----PSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 789 PPPXPPPPXXXALXPXSPLXPXXPXHPPPPP 881
PP PPPP P P PPPPP
Sbjct: 5 PPGNPPPPP-----PPPGFEPPSQPPPPPPP 30
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.9 bits (64), Expect = 0.50
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +3
Query: 771 PPXXPXPPPXPPPPXXXALXPXSPLXPXXPXHPPPP 878
PP P P PPP + P P P PPP
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 783 PXPPPXPPPPXXXALXPXSPL 845
P PPP PP P A P PL
Sbjct: 3 PAPPPPPPAPAPAAAAPAPPL 23
Score = 25.8 bits (54), Expect = 8.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 783 PXPPPXPPPPXXXALXPXSPLXPXXPXHPPPPP 881
P P PP P P S P P PPP P
Sbjct: 124 PPSAPAPPTPQSELRPPTSA--PPRPSIPPPSP 154
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 783 PXPPPXPPPPXXXALXPXSPLXPXXPXHPPPPP 881
P P PPP A P P P PP P
Sbjct: 166 PIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/47 (31%), Positives = 15/47 (31%), Gaps = 2/47 (4%)
Frame = +1
Query: 676 PPPPPXXPAXTXXXXXXXXXXXXXXXXXXXXXX--PPXPXPPPXPPP 810
PPPPP P T P P PPP PPP
Sbjct: 907 PPPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPPPPPPPP 953
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +1
Query: 673 PPPPPPXXPAXTXXXXXXXXXXXXXXXXXXXXXXPPXPXPPPXPPPXP 816
PPPPPP P T PPP PPP P
Sbjct: 907 PPPPPP-LPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPPPPPPPP 953
Score = 25.8 bits (54), Expect = 8.2
Identities = 13/46 (28%), Positives = 13/46 (28%)
Frame = +3
Query: 672 PPPPPPXXPGXXXXXXXXXXXXXXXXXXXXXXXPPXXPXPPPXPPP 809
PPPPP P P PPP PPP
Sbjct: 908 PPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPPPPPPPP 953
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = +3
Query: 774 PXXPXPPPXPPPPXXXALXPXSPLXPXXPXHPPPPP 881
P P P PP P + P P PPP P
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVP 1067
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +3
Query: 783 PXPPPXPPPPXXXALXPXSPLXPXXPXHPPPPP 881
P PP PPP + SP HPP P
Sbjct: 963 PAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAP 995
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 23.4 bits (48), Expect(2) = 2.8
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1
Query: 673 PPPPPPXXPA 702
PPPPPP P+
Sbjct: 306 PPPPPPPPPS 315
Score = 22.2 bits (45), Expect(2) = 2.8
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1
Query: 637 PPAPPSXRXXXXPPPPPP 690
P + S PPPPPP
Sbjct: 295 PSSGDSANGGLPPPPPPP 312
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -2
Query: 877 GGGGWXGXXGXRGEXGXSAXXXGGGGXGGGXG 782
GGG G G G G GGG G G G
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGGRGRGRG 477
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 880 GGGGGWXGXXGXRGEXGXSAXXXGGGGXGGGXGXXGG 770
GG G G G G S GGG GG G G
Sbjct: 148 GGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRG 184
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 26.6 bits (56), Expect = 4.7
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 771 PPXXPXPPPXPPPP 812
PP P PPP PP P
Sbjct: 806 PPPAPLPPPAPPLP 819
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.6 bits (56), Expect = 4.7
Identities = 18/70 (25%), Positives = 19/70 (27%)
Frame = +3
Query: 672 PPPPPPXXPGXXXXXXXXXXXXXXXXXXXXXXXPPXXPXPPPXPPPPXXXALXPXSPLXP 851
PPPP PG P PPP P P P+
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP-PMHHEPGEHMPPPPMHH 266
Query: 852 XXPXHPPPPP 881
H PPPP
Sbjct: 267 EPGEHMPPPP 276
Score = 26.6 bits (56), Expect = 4.7
Identities = 18/70 (25%), Positives = 19/70 (27%)
Frame = +3
Query: 672 PPPPPPXXPGXXXXXXXXXXXXXXXXXXXXXXXPPXXPXPPPXPPPPXXXALXPXSPLXP 851
PPPP PG P PPP P P P+
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP-PMHHEPGEHMPPPPMHH 279
Query: 852 XXPXHPPPPP 881
H PPPP
Sbjct: 280 EPGEHMPPPP 289
Score = 26.6 bits (56), Expect = 4.7
Identities = 18/70 (25%), Positives = 19/70 (27%)
Frame = +3
Query: 672 PPPPPPXXPGXXXXXXXXXXXXXXXXXXXXXXXPPXXPXPPPXPPPPXXXALXPXSPLXP 851
PPPP PG P PPP P P P+
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP-PMHHEPGEHMPPPPMHH 292
Query: 852 XXPXHPPPPP 881
H PPPP
Sbjct: 293 EPGEHMPPPP 302
Score = 26.6 bits (56), Expect = 4.7
Identities = 18/70 (25%), Positives = 19/70 (27%)
Frame = +3
Query: 672 PPPPPPXXPGXXXXXXXXXXXXXXXXXXXXXXXPPXXPXPPPXPPPPXXXALXPXSPLXP 851
PPPP PG P PPP P P P+
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP-PMHHEPGEHMPPPPMHH 305
Query: 852 XXPXHPPPPP 881
H PPPP
Sbjct: 306 EPGEHMPPPP 315
Score = 26.6 bits (56), Expect = 4.7
Identities = 18/70 (25%), Positives = 19/70 (27%)
Frame = +3
Query: 672 PPPPPPXXPGXXXXXXXXXXXXXXXXXXXXXXXPPXXPXPPPXPPPPXXXALXPXSPLXP 851
PPPP PG P PPP P P P+
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP-PMHHEPGEHMPPPPMHH 318
Query: 852 XXPXHPPPPP 881
H PPPP
Sbjct: 319 EPGEHMPPPP 328
Score = 26.6 bits (56), Expect = 4.7
Identities = 18/70 (25%), Positives = 19/70 (27%)
Frame = +3
Query: 672 PPPPPPXXPGXXXXXXXXXXXXXXXXXXXXXXXPPXXPXPPPXPPPPXXXALXPXSPLXP 851
PPPP PG P PPP P P P+
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP-PMHHEPGEHMPPPPMHH 331
Query: 852 XXPXHPPPPP 881
H PPPP
Sbjct: 332 EPGEHMPPPP 341
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 811 GGGGXGGGXGXXGG 770
GGGG GGG G GG
Sbjct: 135 GGGGMGGGMGGMGG 148
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,788,279
Number of Sequences: 5004
Number of extensions: 29052
Number of successful extensions: 431
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 442483990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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