Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_D23
         (891 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P48821 Cluster: Antibacterial peptide enbocin precursor...    52   3e-05
UniRef50_Q8WZX1 Cluster: Related to DNA repair endonuclease rad2...    34   4.2  
UniRef50_A7QEZ5 Cluster: Chromosome chr16 scaffold_86, whole gen...    33   7.4  

>UniRef50_P48821 Cluster: Antibacterial peptide enbocin precursor;
           n=5; Ditrysia|Rep: Antibacterial peptide enbocin
           precursor - Bombyx mori (Silk moth)
          Length = 59

 Score = 51.6 bits (118), Expect = 3e-05
 Identities = 22/27 (81%), Positives = 24/27 (88%)
 Frame = +3

Query: 105 MNFTRIIFFLFVVVFATASAKPWELLQ 185
           MNFTRIIFFLFVVVFATAS KPW + +
Sbjct: 1   MNFTRIIFFLFVVVFATASGKPWNIFK 27



 Score = 36.7 bits (81), Expect = 0.79
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = +1

Query: 175 NFFKEIERAVARTRDAVI 228
           N FKEIERAVARTRDAVI
Sbjct: 24  NIFKEIERAVARTRDAVI 41


>UniRef50_Q8WZX1 Cluster: Related to DNA repair endonuclease rad2;
           n=2; Neurospora crassa|Rep: Related to DNA repair
           endonuclease rad2 - Neurospora crassa
          Length = 1037

 Score = 34.3 bits (75), Expect = 4.2
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
 Frame = -1

Query: 393 VLLILLNRGNTVPN*L--CEVQAGHVSLRAVMGTGVLGLAGRDGGSCAYRRHRRTRA--- 229
           VL+ L++ G+ +P  +  C V+    + RA  G  + G+   D  +    + R TR    
Sbjct: 194 VLVALMSGGDYLPEGVPGCGVKVACEAARAGFGKELCGIRRADEAALERWKERLTRELRT 253

Query: 228 -DDGISRPRHGALDFLEEVPKVSLMR 154
            + G  R RH ALD  E  P + ++R
Sbjct: 254 NESGFFRTRHKALDIPEGFPSLEVLR 279


>UniRef50_A7QEZ5 Cluster: Chromosome chr16 scaffold_86, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr16 scaffold_86, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 251

 Score = 33.5 bits (73), Expect = 7.4
 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = -3

Query: 544 YYMIHYTL*VYTSELFVFYIKQFVNAS*PDPTEQTHSICNLYLNTNFIQ-WSSLDFIKQG 368
           Y MIH  L VY+ + F+ Y+K  + ++ P  T Q  S  +  L    ++ W+S   + Q 
Sbjct: 23  YTMIHKWLNVYSDKNFLPYLKSLLMSNIPGMTSQVSSCLSFILPRKLLKDWAS---VSQH 79

Query: 367 KYCSEL 350
            +C EL
Sbjct: 80  LHCYEL 85


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,596,545
Number of Sequences: 1657284
Number of extensions: 10356652
Number of successful extensions: 37116
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 31280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36958
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80342087756
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)