Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_D19
(898 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.28
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.28
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.28
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.5
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.0
AF039713-13|AAB96719.2| 690|Caenorhabditis elegans Hypothetical... 30 2.6
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 2.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 3.4
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 3.4
AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical ... 29 3.4
AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical ... 29 3.4
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 3.4
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 3.4
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 29 3.4
U38378-1|AAA79751.1| 418|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 28 7.9
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.28
Identities = 27/102 (26%), Positives = 27/102 (26%)
Frame = +2
Query: 530 PPXXPPXXXXXPXPXXXXXXXXXRPGGPGXPPXXXGXIXPPHXXKNXPSXAXLXAPPPXX 709
PP PP P G P PP G PP P A PPP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSP--PPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 294
Query: 710 KXXXXXNXXXXXGXXXXXPPRLXXXPPLNPPXHTXPXPPPXR 835
PP P PP T PPP R
Sbjct: 295 GSPPPPPPPRGSPPTGSLPPPQAGGSP--PPAGTGSPPPPPR 334
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = +3
Query: 534 PXXPXXXXXPPXPXXXXXXXXPAPGAXGXPPXGGXXSGPPTXXKTXLXXXPSXPPPPXXK 713
P P PP P P P A G PP S PP S PPP
Sbjct: 264 PPPPRTGSPPPPPTGSP----PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 319
Query: 714 XP 719
P
Sbjct: 320 SP 321
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.1 bits (72), Expect = 0.28
Identities = 27/102 (26%), Positives = 27/102 (26%)
Frame = +2
Query: 530 PPXXPPXXXXXPXPXXXXXXXXXRPGGPGXPPXXXGXIXPPHXXKNXPSXAXLXAPPPXX 709
PP PP P G P PP G PP P A PPP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSP--PPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 315
Query: 710 KXXXXXNXXXXXGXXXXXPPRLXXXPPLNPPXHTXPXPPPXR 835
PP P PP T PPP R
Sbjct: 316 GSPPPPPPPRGSPPTGSLPPPQAGGSP--PPAGTGSPPPPPR 355
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = +3
Query: 534 PXXPXXXXXPPXPXXXXXXXXPAPGAXGXPPXGGXXSGPPTXXKTXLXXXPSXPPPPXXK 713
P P PP P P P A G PP S PP S PPP
Sbjct: 285 PPPPRTGSPPPPPTGSP----PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 340
Query: 714 XP 719
P
Sbjct: 341 SP 342
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.28
Identities = 27/102 (26%), Positives = 27/102 (26%)
Frame = +2
Query: 530 PPXXPPXXXXXPXPXXXXXXXXXRPGGPGXPPXXXGXIXPPHXXKNXPSXAXLXAPPPXX 709
PP PP P G P PP G PP P A PPP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSP--PPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 300
Query: 710 KXXXXXNXXXXXGXXXXXPPRLXXXPPLNPPXHTXPXPPPXR 835
PP P PP T PPP R
Sbjct: 301 GSPPPPPPPRGSPPTGSLPPPQAGGSP--PPAGTGSPPPPPR 340
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = +3
Query: 534 PXXPXXXXXPPXPXXXXXXXXPAPGAXGXPPXGGXXSGPPTXXKTXLXXXPSXPPPPXXK 713
P P PP P P P A G PP S PP S PPP
Sbjct: 270 PPPPRTGSPPPPPTGSP----PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 325
Query: 714 XP 719
P
Sbjct: 326 SP 327
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Frame = +3
Query: 561 PPXPXXXXXXXXPAPGAXGXPPX-GGXXSGPPTXXKTXLXXXPSXPPPPXXKXP 719
PP P P G PP GG PP + P PPPP P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 29.9 bits (64), Expect = 2.6
Identities = 25/87 (28%), Positives = 25/87 (28%), Gaps = 2/87 (2%)
Frame = +2
Query: 602 PGGPGXPPXXXGXIXPPHXXKNXPSXAXLXAPPPXXKXXXXXNXXXXXGXXXXXPPR--L 775
P PG PP G PP P PPP G PP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISG-----GPPPPPPPPGGC 768
Query: 776 XXXPPLNPPXHTXPXPPPXRXPLFFXP 856
PP PP PPP P F P
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/79 (26%), Positives = 21/79 (26%)
Frame = +2
Query: 605 GGPGXPPXXXGXIXPPHXXKNXPSXAXLXAPPPXXKXXXXXNXXXXXGXXXXXPPRLXXX 784
G PP G PP P PPP PP
Sbjct: 702 GSSALPPITGGPPPPPGLP---PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGP 758
Query: 785 PPLNPPXHTXPXPPPXRXP 841
PP PP P PPP P
Sbjct: 759 PPPPPPPGGCPPPPPPPPP 777
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/59 (27%), Positives = 16/59 (27%)
Frame = +3
Query: 543 PXXXXXPPXPXXXXXXXXPAPGAXGXPPXGGXXSGPPTXXKTXLXXXPSXPPPPXXKXP 719
P PP P PP GG PP P PPPP P
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/59 (30%), Positives = 18/59 (30%), Gaps = 2/59 (3%)
Frame = +3
Query: 534 PXXPXXXXXPPXPXXXXXXXXPAPGAXGXPPXGGXX--SGPPTXXKTXLXXXPSXPPPP 704
P P PP P G PP GG SG P P PPPP
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Frame = +3
Query: 561 PPXPXXXXXXXXPAPGAXGXPPX-GGXXSGPPTXXKTXLXXXPSXPPPPXXKXP 719
PP P P G PP GG PP + P PPPP P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 29.9 bits (64), Expect = 2.6
Identities = 25/87 (28%), Positives = 25/87 (28%), Gaps = 2/87 (2%)
Frame = +2
Query: 602 PGGPGXPPXXXGXIXPPHXXKNXPSXAXLXAPPPXXKXXXXXNXXXXXGXXXXXPPR--L 775
P PG PP G PP P PPP G PP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISG-----GPPPPPPPPGGC 768
Query: 776 XXXPPLNPPXHTXPXPPPXRXPLFFXP 856
PP PP PPP P F P
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/79 (26%), Positives = 21/79 (26%)
Frame = +2
Query: 605 GGPGXPPXXXGXIXPPHXXKNXPSXAXLXAPPPXXKXXXXXNXXXXXGXXXXXPPRLXXX 784
G PP G PP P PPP PP
Sbjct: 702 GSSALPPITGGPPPPPGLP---PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGP 758
Query: 785 PPLNPPXHTXPXPPPXRXP 841
PP PP P PPP P
Sbjct: 759 PPPPPPPGGCPPPPPPPPP 777
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/59 (27%), Positives = 16/59 (27%)
Frame = +3
Query: 543 PXXXXXPPXPXXXXXXXXPAPGAXGXPPXGGXXSGPPTXXKTXLXXXPSXPPPPXXKXP 719
P PP P PP GG PP P PPPP P
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/59 (30%), Positives = 18/59 (30%), Gaps = 2/59 (3%)
Frame = +3
Query: 534 PXXPXXXXXPPXPXXXXXXXXPAPGAXGXPPXGGXX--SGPPTXXKTXLXXXPSXPPPP 704
P P PP P G PP GG SG P P PPPP
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Frame = +3
Query: 561 PPXPXXXXXXXXPAPGAXGXPPX-GGXXSGPPTXXKTXLXXXPSXPPPPXXKXP 719
PP P P G PP GG PP + P PPPP P
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 352
Score = 29.9 bits (64), Expect = 2.6
Identities = 25/87 (28%), Positives = 25/87 (28%), Gaps = 2/87 (2%)
Frame = +2
Query: 602 PGGPGXPPXXXGXIXPPHXXKNXPSXAXLXAPPPXXKXXXXXNXXXXXGXXXXXPPR--L 775
P PG PP G PP P PPP G PP
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISG-----GPPPPPPPPGGC 351
Query: 776 XXXPPLNPPXHTXPXPPPXRXPLFFXP 856
PP PP PPP P F P
Sbjct: 352 PPPPPPPPPGGFKGGPPPPPPPGMFAP 378
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/79 (26%), Positives = 21/79 (26%)
Frame = +2
Query: 605 GGPGXPPXXXGXIXPPHXXKNXPSXAXLXAPPPXXKXXXXXNXXXXXGXXXXXPPRLXXX 784
G PP G PP P PPP PP
Sbjct: 285 GSSALPPITGGPPPPPGLP---PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGP 341
Query: 785 PPLNPPXHTXPXPPPXRXP 841
PP PP P PPP P
Sbjct: 342 PPPPPPPGGCPPPPPPPPP 360
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/59 (27%), Positives = 16/59 (27%)
Frame = +3
Query: 543 PXXXXXPPXPXXXXXXXXPAPGAXGXPPXGGXXSGPPTXXKTXLXXXPSXPPPPXXKXP 719
P PP P PP GG PP P PPPP P
Sbjct: 320 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 378
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/59 (30%), Positives = 18/59 (30%), Gaps = 2/59 (3%)
Frame = +3
Query: 534 PXXPXXXXXPPXPXXXXXXXXPAPGAXGXPPXGGXX--SGPPTXXKTXLXXXPSXPPPP 704
P P PP P G PP GG SG P P PPPP
Sbjct: 300 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/81 (25%), Positives = 24/81 (29%), Gaps = 1/81 (1%)
Frame = +2
Query: 602 PGGPGXPPXXXGXIXP-PHXXKNXPSXAXLXAPPPXXKXXXXXNXXXXXGXXXXXPPRLX 778
P P PP I P P APPP + + PP
Sbjct: 442 PPPPSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNP-SPSPQPAEVSKSPPPPP 500
Query: 779 XXPPLNPPXHTXPXPPPXRXP 841
PP+ P P PPP P
Sbjct: 501 PLPPIATPSSVPPPPPPPPPP 521
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/64 (31%), Positives = 22/64 (34%)
Frame = +2
Query: 635 GXIXPPHXXKNXPSXAXLXAPPPXXKXXXXXNXXXXXGXXXXXPPRLXXXPPLNPPXHTX 814
G + PPH N PPP G PPRL PP PP +
Sbjct: 1557 GGLPPPHGGMN----GWRGGPPPPRGGSHCQGPPPLMGGP---PPRLGMPPPGPPPPNGG 1609
Query: 815 PXPP 826
P PP
Sbjct: 1610 PPPP 1613
>AF039713-13|AAB96719.2| 690|Caenorhabditis elegans Hypothetical
protein F57B10.1 protein.
Length = 690
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 342 GVCLKDHFPIALAEPKDLDRRAR 274
G+CL D FP+ AE +DL R R
Sbjct: 268 GICLPDFFPLTKAEERDLKRIRR 290
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 764 PPRLXXXPPLNPPXHTXPXPPPXRXPLFFXP 856
PP + PP PP P PP P+ F P
Sbjct: 709 PPGIPGYPPAPPPPGVGPPPPQGIPPMGFDP 739
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 3.4
Identities = 27/113 (23%), Positives = 30/113 (26%), Gaps = 9/113 (7%)
Frame = +2
Query: 530 PPXXPPXXXXXPXPXXXXXXXXXRPGGPGXPPXXXGXIXPPHXXKNXPSXAXLXAPPPXX 709
PP PP P P P P P PP P + PP
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPP-P 319
Query: 710 KXXXXXNXXXXXGXXXXXPPRL---XXXPPLNPPXH------TXPXPPPXRXP 841
G PP + PP PP + P PPP R P
Sbjct: 320 PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 372
Score = 29.5 bits (63), Expect = 3.4
Identities = 25/100 (25%), Positives = 26/100 (26%)
Frame = +2
Query: 530 PPXXPPXXXXXPXPXXXXXXXXXRPGGPGXPPXXXGXIXPPHXXKNXPSXAXLXAPPPXX 709
PP PP P P P PP G PP P + PPP
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYP--GGMPPPPP-- 352
Query: 710 KXXXXXNXXXXXGXXXXXPPRLXXXPPLNPPXHTXPXPPP 829
PP PP P H PPP
Sbjct: 353 -------PRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 385
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = +3
Query: 534 PXXPXXXXXPPXPXXXXXXXXPAPGAXGXPPXGGXXSGPPTXXKTXLXXXPSXPPPP 704
P P P P P P G P GG PP + P PPPP
Sbjct: 299 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPP--PPPP 353
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 3.4
Identities = 27/113 (23%), Positives = 30/113 (26%), Gaps = 9/113 (7%)
Frame = +2
Query: 530 PPXXPPXXXXXPXPXXXXXXXXXRPGGPGXPPXXXGXIXPPHXXKNXPSXAXLXAPPPXX 709
PP PP P P P P P PP P + PP
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPP-P 329
Query: 710 KXXXXXNXXXXXGXXXXXPPRL---XXXPPLNPPXH------TXPXPPPXRXP 841
G PP + PP PP + P PPP R P
Sbjct: 330 PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 382
Score = 29.5 bits (63), Expect = 3.4
Identities = 25/100 (25%), Positives = 26/100 (26%)
Frame = +2
Query: 530 PPXXPPXXXXXPXPXXXXXXXXXRPGGPGXPPXXXGXIXPPHXXKNXPSXAXLXAPPPXX 709
PP PP P P P PP G PP P + PPP
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYP--GGMPPPPP-- 362
Query: 710 KXXXXXNXXXXXGXXXXXPPRLXXXPPLNPPXHTXPXPPP 829
PP PP P H PPP
Sbjct: 363 -------PRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 395
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = +3
Query: 534 PXXPXXXXXPPXPXXXXXXXXPAPGAXGXPPXGGXXSGPPTXXKTXLXXXPSXPPPP 704
P P P P P P G P GG PP + P PPPP
Sbjct: 309 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPP--PPPP 363
>AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical
protein E02D9.1b protein.
Length = 315
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -2
Query: 849 KKRGXRXGGGXGXVWXGGFXGGXXXRRGG 763
KK G GG G GGF GG RGG
Sbjct: 255 KKEGGEGGGRGGRGGRGGFRGGFRGGRGG 283
>AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical
protein E02D9.1c protein.
Length = 317
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -2
Query: 849 KKRGXRXGGGXGXVWXGGFXGGXXXRRGG 763
KK G GG G GGF GG RGG
Sbjct: 255 KKEGGEGGGRGGRGGRGGFRGGFRGGRGG 283
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +3
Query: 543 PXXXXXPPXPXXXXXXXXPAPGAXGXPPXGGXXSGPPTXXKTXLXXXPSXPPPP 704
P PP P P P PP G PP P PPPP
Sbjct: 272 PHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPP 325
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +3
Query: 543 PXXXXXPPXPXXXXXXXXPAPGAXGXPPXGGXXSGPPTXXKTXLXXXPSXPPPP 704
P PP P P P PP G PP P PPPP
Sbjct: 272 PHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPP 325
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 535 PPXPXXXXXPPPPXXXXXXXXPPRGPXAXPLXXGXXXAPP 654
PP P PPPP P GP PL PP
Sbjct: 49 PPAPIFVAPPPPPCFGPACPPPCFGPACVPLAPIIVNGPP 88
>U38378-1|AAA79751.1| 418|Caenorhabditis elegans Hypothetical
protein R11F4.3 protein.
Length = 418
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 6/41 (14%)
Frame = +2
Query: 764 PPRLXXXPPL-----NPPXHTX-PXPPPXRXPLFFXPRXXR 868
PPR PP+ NPP T P PPP R P P R
Sbjct: 159 PPRFAEVPPIPDAPTNPPTTTTPPPPPPTRAPRPIIPTEVR 199
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/65 (26%), Positives = 21/65 (32%)
Frame = +2
Query: 647 PPHXXKNXPSXAXLXAPPPXXKXXXXXNXXXXXGXXXXXPPRLXXXPPLNPPXHTXPXPP 826
P + P+ L PPP K PP + P PP P PP
Sbjct: 310 PTEAEADAPTTFILPPPPPPMKLDPSPQPAATPVEITEIPPIISPPAP-PPPPPPPPPPP 368
Query: 827 PXRXP 841
P + P
Sbjct: 369 PPQTP 373
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/58 (29%), Positives = 19/58 (32%)
Frame = +2
Query: 695 PPPXXKXXXXXNXXXXXGXXXXXPPRLXXXPPLNPPXHTXPXPPPXRXPLFFXPRXXR 868
PPP G PP + PP PP P PPP L P+ R
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPP-PPPMFGAPPPPPPPSGLGVAPQPPR 131
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,296,895
Number of Sequences: 27780
Number of extensions: 336026
Number of successful extensions: 1971
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1648
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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