Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_D19
         (898 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   5.0  
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    22   6.6  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -1

Query: 646 PDXXPPXGGXPXAP 605
           P   PP GG P AP
Sbjct: 42  PSQGPPPGGPPGAP 55



 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = +3

Query: 603 PGAXGXPPXGGXXSGPPTXXKTXLXXXPS 689
           P     PP GG    PP+   + +   P+
Sbjct: 40  PNPSQGPPPGGPPGAPPSQNPSQMMISPA 68


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/19 (42%), Positives = 8/19 (42%)
 Frame = -2

Query: 654 WGGXXXPXXKGGXPGPPGR 598
           W         GG P PPGR
Sbjct: 119 WNAAHPEEDDGGQPRPPGR 137


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,265
Number of Sequences: 438
Number of extensions: 5281
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)