Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_D18
         (908 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical ...    31   0.86 
AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical ...    31   0.86 
AF040643-1|AAB94960.1|  998|Caenorhabditis elegans Hypothetical ...    31   1.5  

>AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical
           protein C36B7.5b protein.
          Length = 1148

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
 Frame = -2

Query: 349 WVFWRP-----RTCLRGQLERNRLASAERNSDTPFYLWRECSLV*PW-IWSEY 209
           W  W P      TC  G+++RNR+    RN D P      C  + P   WS +
Sbjct: 351 WTLWSPWSLCTATCGVGEIQRNRVCQTGRNCDGPSVEVEACKALLPCPTWSSW 403


>AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical
           protein C36B7.5a protein.
          Length = 1121

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
 Frame = -2

Query: 349 WVFWRP-----RTCLRGQLERNRLASAERNSDTPFYLWRECSLV*PW-IWSEY 209
           W  W P      TC  G+++RNR+    RN D P      C  + P   WS +
Sbjct: 351 WTLWSPWSLCTATCGVGEIQRNRVCQTGRNCDGPSVEVEACKALLPCPTWSSW 403


>AF040643-1|AAB94960.1|  998|Caenorhabditis elegans Hypothetical
            protein F14D2.6 protein.
          Length = 998

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
 Frame = +1

Query: 421  VIVIHKDLPINNLDQLKGLKSCHTGVNRNVGY-KIPLTMLMKRAVFPKMNDHSISPKENE 597
            ++V+     + NLD L+ L+   +  N      ++    L++   FPK+     SPK N 
Sbjct: 843  LLVVKSTAKLENLDFLENLEQIVSLENSTSPIIQLSSNKLLQNVNFPKIKTPLFSPKNNH 902

Query: 598  LKALVDVLHEILASXVN 648
               +VD   EI+ S ++
Sbjct: 903  YIEIVDNKQEIIYSQMS 919


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,740,782
Number of Sequences: 27780
Number of extensions: 424809
Number of successful extensions: 944
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)