Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_D17
(927 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0604 + 30536172-30537143 31 0.98
04_04_0009 + 22134160-22134696 31 1.3
05_04_0188 - 18883979-18884250,18885046-18885666,18885762-188858... 30 2.3
08_01_0395 - 3502750-3503033,3504844-3505663 29 4.0
06_01_0893 - 6834350-6834464,6835042-6835218,6835301-6835350,683... 29 4.0
02_01_0381 - 2764331-2764342,2768966-2769907 29 4.0
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 29 4.0
01_03_0005 + 11568545-11569119,11569179-11569191 29 4.0
11_01_0252 + 1934505-1935032,1936001-1936957 29 5.2
10_08_0506 + 18390892-18391373,18392699-18392798,18393152-183934... 29 5.2
06_02_0257 - 13533689-13533714,13533799-13533925,13534013-135341... 29 5.2
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 26 5.8
11_06_0369 - 22760383-22760440,22761410-22761497,22761582-227616... 29 6.9
09_02_0468 - 9608922-9610061 29 6.9
08_01_0600 - 5262573-5262773,5262850-5262952,5263050-5263180,526... 29 6.9
06_03_1178 + 28203466-28204590,28204745-28205652,28206189-28206258 29 6.9
06_03_0082 + 16363742-16364632 29 6.9
02_04_0382 - 22501041-22501279,22501717-22501810 29 6.9
12_01_0252 + 1868670-1869200,1870167-1871120 28 9.2
09_04_0254 + 16131779-16132475,16132609-16132768,16132944-161329... 28 9.2
06_01_1176 + 10112257-10113126 28 9.2
>01_06_0604 + 30536172-30537143
Length = 323
Score = 31.5 bits (68), Expect = 0.98
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Frame = +3
Query: 474 KKXXGGGXXXXXPPPPP---PXKKXXGGGGXKKXXXXKKKKKNXXXXPRP 614
K+ G PPPPP P GG G KK K +++ PRP
Sbjct: 32 KRRGEEGAAAPPPPPPPLAFPSYSRLGGAGGKKAAAGKHERRLSLSVPRP 81
>04_04_0009 + 22134160-22134696
Length = 178
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +1
Query: 478 KXXGGGXXXXXPPPPPXKKKXXGGGG 555
K GGG PPPP K GGGG
Sbjct: 55 KACGGGSTAPPPPPPSSSGKSGGGGG 80
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 477 KXXGGGXXXXXPPPPPPXKKXXGGGG 554
K GGG PPPP K GGGG
Sbjct: 55 KACGGGSTAPPPPPPSSSGKSGGGGG 80
>05_04_0188 -
18883979-18884250,18885046-18885666,18885762-18885887,
18886007-18886265
Length = 425
Score = 30.3 bits (65), Expect = 2.3
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 510 PPPPPPXKKXXGGGG 554
PPP PP KK GGGG
Sbjct: 30 PPPSPPHKKLWGGGG 44
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 512 PPPPPXKKXXGGGGG 556
PP PP KK GGGGG
Sbjct: 31 PPSPPHKKLWGGGGG 45
>08_01_0395 - 3502750-3503033,3504844-3505663
Length = 367
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +3
Query: 486 GGGXXXXXPPPPPPXKKXXGGGGXKKXXXXKKKK 587
GGG PPP KK GGGG + K +
Sbjct: 48 GGGSSRAGSEQPPPGKKSRGGGGGEGGGNTSKSR 81
>06_01_0893 -
6834350-6834464,6835042-6835218,6835301-6835350,
6836348-6836416,6836495-6836593,6836681-6836759,
6837604-6837704,6838645-6838713,6839548-6839588,
6839793-6841159,6841472-6841575,6841914-6842351,
6843040-6843567
Length = 1078
Score = 29.5 bits (63), Expect = 4.0
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 512 PPPPPXKKXXGGGGG 556
PPPP KK GGGGG
Sbjct: 23 PPPPVSKKGGGGGGG 37
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 29.5 bits (63), Expect = 4.0
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3
Query: 510 PPPPPPXKKXXGGGG 554
PPPPPP + GGGG
Sbjct: 65 PPPPPPNQPSAGGGG 79
Score = 29.1 bits (62), Expect = 5.2
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2
Query: 512 PPPPPXKKXXGGGGG 556
PPPPP + GGGGG
Sbjct: 66 PPPPPNQPSAGGGGG 80
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -3
Query: 553 PPPPXXFFXGGGGGGXXXXXPPP 485
PPPP GGGGGG PPP
Sbjct: 18 PPPPQA---GGGGGGEFYRGPPP 37
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 29.5 bits (63), Expect = 4.0
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +2
Query: 512 PPPPPXKKXXGGGGGKKXXXXXXXXXXXXGGAPPXXKKKXXXXXPXPXGGG 664
PPPP GGGGG GG P P GGG
Sbjct: 70 PPPPSYPSGGGGGGGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPPTGGG 120
>11_01_0252 + 1934505-1935032,1936001-1936957
Length = 494
Score = 29.1 bits (62), Expect = 5.2
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 465 FFXKKXXGGGXXXXXPPPPPPXKKXXGGGG 554
FF K G PPPPPP GGG
Sbjct: 49 FFRKLFCGLDPNHQPPPPPPPLNWPMAGGG 78
Score = 28.3 bits (60), Expect = 9.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 512 PPPPPXKKXXGGGGGKKXXXXXXXXXXXXGGAP 610
PPPPP GGGG GGAP
Sbjct: 65 PPPPPLNWPMAGGGGGGSGGGGRGGAGGGGGAP 97
>10_08_0506 +
18390892-18391373,18392699-18392798,18393152-18393485,
18393756-18393868,18394437-18394565,18394746-18394839,
18394942-18395025,18395265-18395896,18396662-18396951,
18397098-18397242,18397876-18397973,18398075-18398156,
18398607-18398612,18398845-18398928
Length = 890
Score = 29.1 bits (62), Expect = 5.2
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 511 PPPPPXKKKXXGGGG 555
PPPPP +++ GGGG
Sbjct: 73 PPPPPRRRRGRGGGG 87
>06_02_0257 -
13533689-13533714,13533799-13533925,13534013-13534121,
13534193-13534272,13534758-13534979,13536070-13536318,
13537032-13537484,13539834-13540556
Length = 662
Score = 29.1 bits (62), Expect = 5.2
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 510 PPPPPPXKKXXGGGG 554
PPPPPP GGGG
Sbjct: 66 PPPPPPSSAAAGGGG 80
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 25.8 bits (54), Expect(2) = 5.8
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 513 PPPPPXKKXXGGGG 554
PPPPP GGGG
Sbjct: 370 PPPPPGAAGRGGGG 383
Score = 21.4 bits (43), Expect(2) = 5.8
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3
Query: 492 GXXXXXPPPPPP 527
G PPPPPP
Sbjct: 344 GAGSGPPPPPPP 355
>11_06_0369 -
22760383-22760440,22761410-22761497,22761582-22761649,
22761742-22761858,22761964-22762084,22762172-22762247,
22762336-22762435,22762524-22762615,22763514-22763664,
22764698-22764792,22764900-22765193
Length = 419
Score = 28.7 bits (61), Expect = 6.9
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 510 PPPPPPXKKXXGGGG 554
PPPPPP GGGG
Sbjct: 52 PPPPPPLMAALGGGG 66
Score = 28.7 bits (61), Expect = 6.9
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 512 PPPPPXKKXXGGGGGK 559
PPPPP GGGGG+
Sbjct: 53 PPPPPLMAALGGGGGE 68
>09_02_0468 - 9608922-9610061
Length = 379
Score = 28.7 bits (61), Expect = 6.9
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 510 PPPPPPXKKXXGGGG 554
PPPPPP GGGG
Sbjct: 347 PPPPPPATTSNGGGG 361
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 512 PPPPPXKKXXGGGGG 556
PPPPP GGGGG
Sbjct: 348 PPPPPATTSNGGGGG 362
>08_01_0600 -
5262573-5262773,5262850-5262952,5263050-5263180,
5263263-5263312,5265266-5265725,5266349-5266708
Length = 434
Score = 28.7 bits (61), Expect = 6.9
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = -3
Query: 553 PPPPXXFFXGGGGGGXXXXXPPPXXFFXKKKKXPXPP 443
PPPP GGGG PP +++ P PP
Sbjct: 5 PPPPQAGVAGGGGAPPQWGAIPPPVPHQQQQYAPPPP 41
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 510 PPPPPPXKKXXGGGG 554
PPPPPP GGGG
Sbjct: 3 PPPPPPQAGVAGGGG 17
>06_03_1178 + 28203466-28204590,28204745-28205652,28206189-28206258
Length = 700
Score = 28.7 bits (61), Expect = 6.9
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 474 KKXXGGGXXXXXPPPPPPXKKXXGG 548
KK GG PPPPPP GG
Sbjct: 230 KKGGVGGPEFLPPPPPPPPTPAAGG 254
>06_03_0082 + 16363742-16364632
Length = 296
Score = 28.7 bits (61), Expect = 6.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 486 GGGXXXXXPPPPPPXKKXXGGG 551
GGG PPPPPP GG
Sbjct: 163 GGGEERPPPPPPPPFPDDSDGG 184
>02_04_0382 - 22501041-22501279,22501717-22501810
Length = 110
Score = 28.7 bits (61), Expect = 6.9
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -3
Query: 559 FXPPPPXXFFXGGGGGGXXXXXPP 488
+ PPP ++ GGGG G PP
Sbjct: 80 YYDPPPSPYYGGGGGYGKPPPPPP 103
>12_01_0252 + 1868670-1869200,1870167-1871120
Length = 494
Score = 28.3 bits (60), Expect = 9.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 512 PPPPPXKKXXGGGGGKKXXXXXXXXXXXXGGAP 610
PPPPP GGGG GGAP
Sbjct: 66 PPPPPLNWPTAGGGGGGSGGGGRGGAGGGGGAP 98
>09_04_0254 +
16131779-16132475,16132609-16132768,16132944-16132992,
16133158-16133271,16133434-16133958,16135538-16135969,
16138882-16138956,16139530-16139625,16140610-16140725,
16140822-16140992,16141080-16141239,16141328-16141513,
16141624-16141752,16141837-16141915,16142034-16142143
Length = 1032
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 486 GGGXXXXXPPPPPPXKKXXGGGGXK 560
GGG P PPP + GGGG +
Sbjct: 99 GGGGGQMPQPLPPPLRTPEGGGGAR 123
>06_01_1176 + 10112257-10113126
Length = 289
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 488 GGXXXXXXPPPPPXKKXXGGGGG 556
GG P PPP GGGGG
Sbjct: 77 GGCRKPKRPAPPPSSSFTGGGGG 99
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,046,547
Number of Sequences: 37544
Number of extensions: 797528
Number of successful extensions: 5398
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4027
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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