Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_D17
         (927 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   5.7  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    24   7.5  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect = 5.7
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +3

Query: 492 GXXXXXPPPPPPXKKXXGGG 551
           G     PPPPPP      GG
Sbjct: 779 GIGSPPPPPPPPPSSLSPGG 798



 Score = 24.2 bits (50), Expect = 5.7
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +3

Query: 510 PPPPPPXKKXXGGGGXKKXXXXKK 581
           PPPPPP       GG  +    +K
Sbjct: 784 PPPPPPPPSSLSPGGVPRPTVLQK 807


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 7.5
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = +1

Query: 103 QPSNTTPGKLVGVNLMLPXKRFGPFRPFSPXKRWXKFXQKNFPKL 237
           QP+ T P +LVG + +    +  P  PF+  + W +      P L
Sbjct: 178 QPAPTQPHELVGTDPLSSPLQAAPREPFT-DRIWIRLSAYQRPSL 221


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 720,226
Number of Sequences: 2352
Number of extensions: 14771
Number of successful extensions: 41
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100882044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)