Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_D17
(927 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 33 0.29
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 33 0.38
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 33 0.38
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 0.88
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 31 1.2
AL132904-4|CAC35836.2| 582|Caenorhabditis elegans Hypothetical ... 30 2.7
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 29 3.6
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 24 4.4
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 24 5.3
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 24 5.3
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 29 6.2
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 29 6.2
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 28 8.2
AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like ... 28 8.2
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 28 8.2
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 28 8.2
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 33.1 bits (72), Expect = 0.29
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +3
Query: 486 GGGXXXXXPPPPPPXKKXXGGGG 554
GGG PPPPPP GGGG
Sbjct: 23 GGGGCGCAPPPPPPSPCGCGGGG 45
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 465 FFXKKXXGGGXXXXXPPPPPPXKKXXGGGG 554
F GGG PPPPP GGGG
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPSPCGCGGGGG 46
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 487 GGGXXXXXPPPPPXKKKXXGGGG 555
GGG PPPPP GGGG
Sbjct: 23 GGGGCGCAPPPPPPSPCGCGGGG 45
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 488 GGXXXXXXPPPPPXKKXXGGGGG 556
GG PPPPP GGGGG
Sbjct: 24 GGGCGCAPPPPPPSPCGCGGGGG 46
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 32.7 bits (71), Expect = 0.38
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +3
Query: 486 GGGXXXXXPPPPPPXKKXXGGGGXKK 563
GGG PPPPPP G GG KK
Sbjct: 37 GGGGGCCAPPPPPPVCGGCGCGGRKK 62
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 32.7 bits (71), Expect = 0.38
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +3
Query: 486 GGGXXXXXPPPPPPXKKXXGGGG 554
GGG PPPPPP GGGG
Sbjct: 23 GGGGCGCAPPPPPPACGCGGGGG 45
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 465 FFXKKXXGGGXXXXXPPPPPPXKKXXGGGG 554
F GGG PPPPP GGGG
Sbjct: 17 FLFPSGGGGGCGCAPPPPPPACGCGGGGGG 46
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 488 GGXXXXXXPPPPPXKKXXGGGGG 556
GG PPPPP GGGGG
Sbjct: 23 GGGGCGCAPPPPPPACGCGGGGG 45
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 488 GGXXXXXXPPPPPXKKXXGGGGG 556
GG PPPPP GGGGG
Sbjct: 24 GGGCGCAPPPPPPACGCGGGGGG 46
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -3
Query: 553 PPPPXXFFXGGGGGGXXXXXPPP 485
PPPP GGGGGG PPP
Sbjct: 32 PPPPPACGCGGGGGGY--AAPPP 52
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.5 bits (68), Expect = 0.88
Identities = 19/50 (38%), Positives = 19/50 (38%)
Frame = +1
Query: 406 GGVGGXXXKKKXGGGXGXFFFXKKKXXGGGXXXXXPPPPPXKKKXXGGGG 555
GG GG GGG G G G PPPPP GGGG
Sbjct: 77 GGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGG 126
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/50 (38%), Positives = 19/50 (38%)
Frame = +1
Query: 406 GGVGGXXXKKKXGGGXGXFFFXKKKXXGGGXXXXXPPPPPXKKKXXGGGG 555
GG GG GGG G G G PPPPP GGGG
Sbjct: 25 GGGGGGGCGGGCGGGGGC-----GGGGGCGGGCAPPPPPPACGGGCGGGG 69
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 465 FFXKKXXGGGXXXXXPPPPPPXKKXXGGG 551
F GGG PPPPPP GGG
Sbjct: 16 FLFNLLGGGGGGCCAPPPPPPCGGGCGGG 44
>AL132904-4|CAC35836.2| 582|Caenorhabditis elegans Hypothetical
protein Y111B2A.8 protein.
Length = 582
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3
Query: 510 PPPPPPXKKXXGGGG 554
PPPPPP + GGGG
Sbjct: 511 PPPPPPQSQQAGGGG 525
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/82 (24%), Positives = 23/82 (28%), Gaps = 7/82 (8%)
Frame = +3
Query: 486 GGGXXXXXP-PPPPPX------KKXXGGGGXKKXXXXKKKKKNXXXXPRPXXKKKXXXXX 644
GGG P P P P KK GGG +N PR
Sbjct: 458 GGGNGPVPPIPEPKPLCKGLKFKKTANGGGGNNNNNNNNNNRNNGPPPRNNGNNNGNGRP 517
Query: 645 PXPXGGGXXXKKKKKXXPPPXP 710
P ++ PPP P
Sbjct: 518 MKPPSSSGSGSNRRSGPPPPPP 539
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/35 (28%), Positives = 14/35 (40%)
Frame = +3
Query: 489 GGXXXXXPPPPPPXKKXXGGGGXKKXXXXKKKKKN 593
G PPPPPP + G G + ++ N
Sbjct: 527 GSNRRSGPPPPPPPPRSSGANGNRNGGGGNRRNNN 561
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 23.8 bits (49), Expect(2) = 4.4
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3
Query: 550 PPPXXFFXGGGGGG 509
PP F GGGGGG
Sbjct: 181 PPSNDFGPGGGGGG 194
Score = 23.8 bits (49), Expect(2) = 4.4
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -3
Query: 526 GGGGGGXXXXXPPPXXFFXKKKKXP 452
GG GGG PPP + ++ P
Sbjct: 202 GGSGGGSGRFPPPPPPYGGGGRRRP 226
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 23.8 bits (49), Expect(2) = 5.3
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 510 PPPPPPXKKXXGGGG 554
PPPPPP GG
Sbjct: 307 PPPPPPAPAPVSSGG 321
Score = 23.4 bits (48), Expect(2) = 5.3
Identities = 12/30 (40%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Frame = +3
Query: 444 GGXGXFFFFXKKXXGGGXXXXX--PPPPPP 527
GG G + GGG PPPPPP
Sbjct: 278 GGGGSSGGYAGSSGGGGYSAPAAAPPPPPP 307
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 23.8 bits (49), Expect(2) = 5.3
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 510 PPPPPPXKKXXGGGG 554
PPPPPP GG
Sbjct: 307 PPPPPPAPAPVSSGG 321
Score = 23.4 bits (48), Expect(2) = 5.3
Identities = 12/30 (40%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Frame = +3
Query: 444 GGXGXFFFFXKKXXGGGXXXXX--PPPPPP 527
GG G + GGG PPPPPP
Sbjct: 278 GGGGSSGGYAGSSGGGGYSAPAAAPPPPPP 307
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +2
Query: 512 PPPPPXKKXXGGGGGKKXXXXXXXXXXXXGGAPPXXKKKXXXXXPXPXGGG 664
PPPP GGGGG GG + P GGG
Sbjct: 281 PPPPSGSAMGGGGGGGATSAYFGVGSGAMGGGGAGAQSAYFGVGGGPVGGG 331
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +2
Query: 512 PPPPPXKKXXGGGGGKKXXXXXXXXXXXXGGAPPXXKKKXXXXXPXPXGGG 664
PPPP GGGGG GG + P GGG
Sbjct: 175 PPPPSGSAMGGGGGGGATSAYFGVGSGAMGGGGAGAQSAYFGVGGGPVGGG 225
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +3
Query: 486 GGGXXXXXPPPPPPXKKXXGGGGXKKXXXXKK 581
GGG PPPPPP + G G KK +K
Sbjct: 58 GGGYGCGIPPPPPPPPQC--GCGRKKRSLPEK 87
>AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like
(grd related) protein20 protein.
Length = 163
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 510 PPPPPPXKKXXGGGGXKKXXXXKKKK 587
PPPPPP G GG KK + K
Sbjct: 64 PPPPPPCGGGCGCGGRKKRAASEDSK 89
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.3 bits (60), Expect = 8.2
Identities = 22/67 (32%), Positives = 22/67 (32%)
Frame = -2
Query: 599 PXIFFFFFXXXXFFXPPPPXXFFXXGGGGGXXXXXPPPXXFFXXXXXXXXXXPLFFXFXX 420
P F FF PPPP F G G PPP F P F
Sbjct: 290 PPPFGFFPPPPRGHFPPPPPHFM---GRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRG 346
Query: 419 PPTPPFF 399
P PPFF
Sbjct: 347 GPYPPFF 353
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.3 bits (60), Expect = 8.2
Identities = 22/67 (32%), Positives = 22/67 (32%)
Frame = -2
Query: 599 PXIFFFFFXXXXFFXPPPPXXFFXXGGGGGXXXXXPPPXXFFXXXXXXXXXXPLFFXFXX 420
P F FF PPPP F G G PPP F P F
Sbjct: 290 PPPFGFFPPPPRGHFPPPPPHFM---GRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRG 346
Query: 419 PPTPPFF 399
P PPFF
Sbjct: 347 GPYPPFF 353
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,384,247
Number of Sequences: 27780
Number of extensions: 408132
Number of successful extensions: 2122
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1488
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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