BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_D16
(905 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC010354-1|AAH10354.1| 345|Homo sapiens growth hormone inducibl... 43 0.001
AY358824-1|AAQ89183.1| 345|Homo sapiens PTD010 protein. 43 0.001
AL603756-2|CAH72661.1| 325|Homo sapiens growth hormone inducibl... 43 0.001
AL603756-1|CAH72660.1| 345|Homo sapiens growth hormone inducibl... 43 0.001
AF131820-1|AAD20052.1| 345|Homo sapiens Unknown protein. 43 0.001
AF060923-1|AAG43135.1| 345|Homo sapiens My021 protein protein. 43 0.001
AB009685-1|BAA93049.1| 345|Homo sapiens DERP2 protein. 43 0.001
CR533519-1|CAG38550.1| 345|Homo sapiens GHITM protein. 43 0.002
>BC010354-1|AAH10354.1| 345|Homo sapiens growth hormone inducible
transmembrane protein protein.
Length = 345
Score = 43.2 bits (97), Expect = 0.001
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +3
Query: 600 PPYVKERIKTTYGYIAGSFGC*LLGNAVAVFTTPALLNLVXK-KWM 734
P YVK+RI +TY Y+AGS G L +A+A+ TP L+N + + W+
Sbjct: 117 PQYVKDRIHSTYMYLAGSIGLTAL-SAIAISRTPVLMNFMMRGSWV 161
>AY358824-1|AAQ89183.1| 345|Homo sapiens PTD010 protein.
Length = 345
Score = 43.2 bits (97), Expect = 0.001
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +3
Query: 600 PPYVKERIKTTYGYIAGSFGC*LLGNAVAVFTTPALLNLVXK-KWM 734
P YVK+RI +TY Y+AGS G L +A+A+ TP L+N + + W+
Sbjct: 117 PQYVKDRIHSTYMYLAGSIGLTAL-SAIAISRTPVLMNFMMRGSWV 161
>AL603756-2|CAH72661.1| 325|Homo sapiens growth hormone inducible
transmembrane protein protein.
Length = 325
Score = 43.2 bits (97), Expect = 0.001
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +3
Query: 600 PPYVKERIKTTYGYIAGSFGC*LLGNAVAVFTTPALLNLVXK-KWM 734
P YVK+RI +TY Y+AGS G L +A+A+ TP L+N + + W+
Sbjct: 97 PQYVKDRIHSTYMYLAGSIGLTAL-SAIAISRTPVLMNFMMRGSWV 141
>AL603756-1|CAH72660.1| 345|Homo sapiens growth hormone inducible
transmembrane protein protein.
Length = 345
Score = 43.2 bits (97), Expect = 0.001
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +3
Query: 600 PPYVKERIKTTYGYIAGSFGC*LLGNAVAVFTTPALLNLVXK-KWM 734
P YVK+RI +TY Y+AGS G L +A+A+ TP L+N + + W+
Sbjct: 117 PQYVKDRIHSTYMYLAGSIGLTAL-SAIAISRTPVLMNFMMRGSWV 161
>AF131820-1|AAD20052.1| 345|Homo sapiens Unknown protein.
Length = 345
Score = 43.2 bits (97), Expect = 0.001
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +3
Query: 600 PPYVKERIKTTYGYIAGSFGC*LLGNAVAVFTTPALLNLVXK-KWM 734
P YVK+RI +TY Y+AGS G L +A+A+ TP L+N + + W+
Sbjct: 117 PQYVKDRIHSTYMYLAGSIGLTAL-SAIAISRTPVLMNFMMRGSWV 161
>AF060923-1|AAG43135.1| 345|Homo sapiens My021 protein protein.
Length = 345
Score = 43.2 bits (97), Expect = 0.001
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +3
Query: 600 PPYVKERIKTTYGYIAGSFGC*LLGNAVAVFTTPALLNLVXK-KWM 734
P YVK+RI +TY Y+AGS G L +A+A+ TP L+N + + W+
Sbjct: 117 PQYVKDRIHSTYMYLAGSIGLTAL-SAIAISRTPVLMNFMMRGSWV 161
>AB009685-1|BAA93049.1| 345|Homo sapiens DERP2 protein.
Length = 345
Score = 43.2 bits (97), Expect = 0.001
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +3
Query: 600 PPYVKERIKTTYGYIAGSFGC*LLGNAVAVFTTPALLNLVXK-KWM 734
P YVK+RI +TY Y+AGS G L +A+A+ TP L+N + + W+
Sbjct: 117 PQYVKDRIHSTYMYLAGSIGLTAL-SAIAISRTPVLMNFMMRGSWV 161
>CR533519-1|CAG38550.1| 345|Homo sapiens GHITM protein.
Length = 345
Score = 42.7 bits (96), Expect = 0.002
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +3
Query: 600 PPYVKERIKTTYGYIAGSFGC*LLGNAVAVFTTPALLNLVXK-KWM 734
P YVK+RI +TY Y+AGS G L +A+A+ TP L+N + + W+
Sbjct: 117 PRYVKDRIHSTYMYLAGSIGLTAL-SAIAISRTPVLMNFMMRGSWV 161
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,658,398
Number of Sequences: 237096
Number of extensions: 2740896
Number of successful extensions: 4682
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4682
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -