Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_D16
         (905 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-619|AAF54013.2|  365|Drosophila melanogaster CG1287-PA ...    36   0.076
BT009945-1|AAQ22414.1|  341|Drosophila melanogaster RH72958p pro...    35   0.13 
AY075204-1|AAL68072.1|  365|Drosophila melanogaster AT14090p pro...    35   0.13 
AE014298-1546|AAF47994.1|  341|Drosophila melanogaster CG2076-PA...    35   0.13 

>AE014297-619|AAF54013.2|  365|Drosophila melanogaster CG1287-PA
           protein.
          Length = 365

 Score = 35.9 bits (79), Expect = 0.076
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
 Frame = +1

Query: 349 KSPVPQNFVPRNYVVRNYAREPRTR----VATRSQ-PTLRERLMAPAGPNAFXXXXXXXX 513
           KS +P+  + +   +R Y+RE R R    + +R++ P+L+ER+M P   NA+        
Sbjct: 48  KSVIPKRNM-QELGMRKYSRESRDRDRSQLESRTRGPSLKERMMGPPSENAYSMGKGAAA 106

Query: 514 XXXXXXXXXXCYYGSGV 564
                     CYYG G+
Sbjct: 107 GAALMGLVGLCYYGLGL 123



 Score = 33.5 bits (73), Expect = 0.41
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +3

Query: 600 PPYVKERIKTTYGYIAGSFGC*LLGNAVAVFTTPALLNLVXKK-WMGCPXIVXLG 761
           P YV++RI  TY Y   S G     +AVA F + A++ L+ +  W+    +V LG
Sbjct: 137 PQYVRDRIHATYAYFGASCGV-TAASAVAFFQSDAMMALMTRSGWVA--SLVTLG 188


>BT009945-1|AAQ22414.1|  341|Drosophila melanogaster RH72958p
           protein.
          Length = 341

 Score = 35.1 bits (77), Expect = 0.13
 Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
 Frame = +1

Query: 391 VRNYAREP-RTR--VATRSQPTLRERLMAPAGPNAFXXXXXXXXXXXXXXXXXXCYYGSG 561
           VR YAR   RTR  V     P+L+E+LM P   NA+                  CYYG G
Sbjct: 40  VRTYARRVVRTREPVEEMRAPSLKEKLMGPPSANAYSMGKGAAAGAAAVGLGALCYYGVG 99

Query: 562 V 564
           +
Sbjct: 100 L 100


>AY075204-1|AAL68072.1|  365|Drosophila melanogaster AT14090p
           protein.
          Length = 365

 Score = 35.1 bits (77), Expect = 0.13
 Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
 Frame = +1

Query: 349 KSPVPQNFVPRNYVVRNYAREPR----TRVATRSQ-PTLRERLMAPAGPNAFXXXXXXXX 513
           KS +P+  + +   +R Y+RE R    +++ +R++ P+L+ER+M P   NA+        
Sbjct: 48  KSVIPKRNM-QELGMRKYSRESRDHDRSQLESRTRGPSLKERMMGPPSENAYSMGKGAAA 106

Query: 514 XXXXXXXXXXCYYGSGV 564
                     CYYG G+
Sbjct: 107 GAALMGLVGLCYYGLGL 123



 Score = 33.5 bits (73), Expect = 0.41
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +3

Query: 600 PPYVKERIKTTYGYIAGSFGC*LLGNAVAVFTTPALLNLVXKK-WMGCPXIVXLG 761
           P YV++RI  TY Y   S G     +AVA F + A++ L+ +  W+    +V LG
Sbjct: 137 PQYVRDRIHATYAYFGASCGV-TAASAVAFFQSDAMMALMTRSGWVA--SLVTLG 188


>AE014298-1546|AAF47994.1|  341|Drosophila melanogaster CG2076-PA
           protein.
          Length = 341

 Score = 35.1 bits (77), Expect = 0.13
 Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
 Frame = +1

Query: 391 VRNYAREP-RTR--VATRSQPTLRERLMAPAGPNAFXXXXXXXXXXXXXXXXXXCYYGSG 561
           VR YAR   RTR  V     P+L+E+LM P   NA+                  CYYG G
Sbjct: 40  VRTYARRVVRTREPVEEMRAPSLKEKLMGPPSANAYSMGKGAAAGAAAVGLGALCYYGVG 99

Query: 562 V 564
           +
Sbjct: 100 L 100


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,442,487
Number of Sequences: 53049
Number of extensions: 800262
Number of successful extensions: 1717
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1714
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4423507848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)