Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_D16
(905 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88168-4|AAC24402.1| 342|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z81118-9|CAM84694.1| 208|Caenorhabditis elegans Hypothetical pr... 33 0.28
AL033514-37|CAA22087.2| 441|Caenorhabditis elegans Hypothetical... 29 3.5
U21323-2|AAM22051.1| 155|Caenorhabditis elegans Hypothetical pr... 29 4.6
U21323-1|AAM22050.1| 542|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 28 8.0
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 28 8.0
AF016445-6|AAC69053.1| 250|Caenorhabditis elegans Hypothetical ... 28 8.0
AC025727-1|AAG23391.3| 429|Caenorhabditis elegans Hypothetical ... 28 8.0
>U88168-4|AAC24402.1| 342|Caenorhabditis elegans Hypothetical
protein K11H12.8a protein.
Length = 342
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +3
Query: 600 PPYVKERIKTTYGYIAGSFGC*LLGNAVAVFTTPALLNL 716
P YV+ERI TTY Y+AGS + + VA + A++ L
Sbjct: 106 PSYVRERISTTYAYLAGSLALTAV-SGVAASRSAAIMRL 143
>Z81118-9|CAM84694.1| 208|Caenorhabditis elegans Hypothetical
protein T10G3.8 protein.
Length = 208
Score = 33.1 bits (72), Expect = 0.28
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 367 NFVPRNYVVRNYAREPRTRVATRSQPTLRERLMAP 471
+ VP+N V +N + +PR RV TR P+ +L P
Sbjct: 119 SLVPKNEVKKNASPQPRVRVITRKSPSPLRKLSTP 153
>AL033514-37|CAA22087.2| 441|Caenorhabditis elegans Hypothetical
protein Y75B8A.27 protein.
Length = 441
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 232 CVFTNIWYQCKSSILTYV 179
C TN+W QC +S+L YV
Sbjct: 379 CTITNLWTQCWNSLLPYV 396
>U21323-2|AAM22051.1| 155|Caenorhabditis elegans Hypothetical
protein C45G9.6b protein.
Length = 155
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 309 VYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRTSNKG 425
V R G CN+ + S +CT + G K+C TSN G
Sbjct: 58 VQRDEGGYCNSNTDCRSGL-YCTASVNGVKICLSTSNGG 95
>U21323-1|AAM22050.1| 542|Caenorhabditis elegans Hypothetical
protein C45G9.6a protein.
Length = 542
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 309 VYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRTSNKG 425
V R G CN+ + S +CT + G K+C TSN G
Sbjct: 58 VQRDEGGYCNSNTDCRSGL-YCTASVNGVKICLSTSNGG 95
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical protein
F40E10.4 protein.
Length = 1410
Score = 28.3 bits (60), Expect = 8.0
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +3
Query: 273 IDVFRINYVITNVYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRT--SNKG-RYTLTT 443
I IN V N+ ++L N E ++T FC CG CT S KG +
Sbjct: 1260 ISSITINEVPINLQQALE-NVNTEQSCSATVNFCAGIDCGNGKCTNNALSPKGYMCQCDS 1318
Query: 444 HTSGE 458
H SGE
Sbjct: 1319 HFSGE 1323
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 28.3 bits (60), Expect = 8.0
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +3
Query: 273 IDVFRINYVITNVYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRT--SNKG-RYTLTT 443
I IN V N+ ++L N E ++T FC CG CT S KG +
Sbjct: 1260 ISSITINEVPINLQQALE-NVNTEQSCSATVNFCAGIDCGNGKCTNNALSPKGYMCQCDS 1318
Query: 444 HTSGE 458
H SGE
Sbjct: 1319 HFSGE 1323
>AF016445-6|AAC69053.1| 250|Caenorhabditis elegans Hypothetical
protein T05B4.10 protein.
Length = 250
Score = 28.3 bits (60), Expect = 8.0
Identities = 19/73 (26%), Positives = 30/73 (41%)
Frame = +3
Query: 300 ITNVYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRTSNKGRYTLTTHTSGETHGTCWT 479
+TN L + CN +C ++ CG+ C T+ G T+T+ GTC +
Sbjct: 163 VTNCGNDLSI-CNTVGMQTFVNTYC-QRTCGR--CPSTTASGSVTVTS-------GTCTS 211
Query: 480 KCIQLGQGCISWS 518
C +WS
Sbjct: 212 YIADSSSNCAAWS 224
>AC025727-1|AAG23391.3| 429|Caenorhabditis elegans Hypothetical
protein Y73E7A.3 protein.
Length = 429
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 609 VKERIKTTYGYIAGSFGC*LLGNAVAVFTTPALLNLV 719
VK+ +T Y + G FGC + G AVF AL +V
Sbjct: 241 VKQHSRTEYLGMLGLFGCIVSGVQTAVFEQEALSKIV 277
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,986,332
Number of Sequences: 27780
Number of extensions: 405346
Number of successful extensions: 957
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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