Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_D10
(966 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 37 0.004
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 34 0.026
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.046
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.080
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.080
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 29 0.98
SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|... 28 1.7
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 28 1.7
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 1.7
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 3.0
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 4.0
SPBC1289.16c ||SPBC8E4.06|copper amine oxidase |Schizosaccharomy... 27 5.2
SPAC977.17 |||MIP water channel|Schizosaccharomyces pombe|chr 1|... 26 6.9
SPAC2E1P3.05c |||fungal cellulose binding domain protein|Schizos... 26 6.9
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 26 6.9
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 26 6.9
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 6.9
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 26 9.1
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 37.1 bits (82), Expect = 0.004
Identities = 31/124 (25%), Positives = 38/124 (30%), Gaps = 9/124 (7%)
Frame = +3
Query: 426 PPVPXSXXLXAGHHPSIXXGXXTTASXPXRPRPFXXPPAXPPXXPXGTSXHPPXPXXXVP 605
PP P AG P G P R P PP +PP P +P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQP-PPLSSSRAVSNPPAPPPAIP 396
Query: 606 XRSXXXXXX---------PPXXXXPTSSPLXXXXPSPXSPPPXXLAXPQSTPTPXLXXHS 758
RS PP P+ P P +PP + P + P P +
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIA 456
Query: 759 TPLP 770
PLP
Sbjct: 457 PPLP 460
Score = 35.1 bits (77), Expect = 0.015
Identities = 22/81 (27%), Positives = 26/81 (32%), Gaps = 1/81 (1%)
Frame = +3
Query: 483 GXXTTASXPXRPRPFXXPPAXPPXXPXGTSXHPPXPXXXVPXRSXXXXXXPP-XXXXPTS 659
G + S P P P PP+ PP P P P PP P +
Sbjct: 407 GNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAA 466
Query: 660 SPLXXXXPSPXSPPPXXLAXP 722
PL P+P P A P
Sbjct: 467 PPLPPAAPAPPPAPAPAPAAP 487
Score = 32.7 bits (71), Expect = 0.080
Identities = 21/86 (24%), Positives = 26/86 (30%), Gaps = 3/86 (3%)
Frame = +1
Query: 427 PLCRXPVXXLPATTRPXLXGXAXXXXXXXGQGXSXXXPPXPXX---PPPGPXXTPPPXFX 597
PL P P + G + G PP P PP P PP
Sbjct: 378 PLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPP 437
Query: 598 XFPXVXRXXPPTPXPSXXPPPPPSXL 675
P PP P + PP P+ +
Sbjct: 438 SLPMGAPAAPPLPPSAPIAPPLPAGM 463
Score = 32.3 bits (70), Expect = 0.11
Identities = 32/118 (27%), Positives = 36/118 (30%), Gaps = 5/118 (4%)
Frame = +3
Query: 426 PPVPXSXXLXAGHHPSIXXGXXTTASXPXRPRPFXXPPAXPPXXPXGTSXHPPXPXXXVP 605
PP P G P I G ++ P P P P P G S PP P P
Sbjct: 312 PPPPPPSRRNRGK-PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 606 --XRSXXXXXXPPXXXXPTSSPLXXXXPSPXSPPPXXLAXPQST---PTPXLXXHSTP 764
R P + P S + PP A ST PTP S P
Sbjct: 371 STGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAP 428
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 34.3 bits (75), Expect = 0.026
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +1
Query: 538 PPXPXXPPPGPXXTPPPXFXXFPXVXRXXPPTPXPSXXPPPPPS 669
PP P PPP P + PP P + PP P+ PPS
Sbjct: 144 PPRPSIPPPSP-ASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPS 186
Score = 33.5 bits (73), Expect = 0.046
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = +1
Query: 538 PPXPXXPPPGPXXTPPPXFXXFPXVXRXXPPTPXPSXXPPPPP 666
PP P PP P PPP P P+ PS PP PP
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPS-LPSAVPPMPP 199
Score = 29.5 bits (63), Expect = 0.74
Identities = 25/103 (24%), Positives = 34/103 (33%)
Frame = +3
Query: 426 PPVPXSXXLXAGHHPSIXXGXXTTASXPXRPRPFXXPPAXPPXXPXGTSXHPPXPXXXVP 605
P +P L AG P + ++AS P PP TS PP P P
Sbjct: 96 PSMPALGGLFAGGMPKLRHIGKSSASAAPPSAP--APPTPQSELRPPTSA-PPRPSIPPP 152
Query: 606 XRSXXXXXXPPXXXXPTSSPLXXXXPSPXSPPPXXLAXPQSTP 734
+ P+S P +P PP + P + P
Sbjct: 153 SPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVP 195
Score = 27.1 bits (57), Expect = 4.0
Identities = 22/86 (25%), Positives = 26/86 (30%)
Frame = +3
Query: 516 PRPFXXPPAXPPXXPXGTSXHPPXPXXXVPXRSXXXXXXPPXXXXPTSSPLXXXXPSPXS 695
PRP PP+ P P S PP P P P S P P
Sbjct: 145 PRPSIPPPS-PASAPPIPSKAPPIPSSLPPPAQPAAPVKSP--PSAPSLPSAVPPMPPKV 201
Query: 696 PPPXXLAXPQSTPTPXLXXHSTPLPH 773
PPP P + + + P H
Sbjct: 202 PPPPLSQAPVANTSSRPSSFAPPAGH 227
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.5 bits (73), Expect = 0.046
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = +3
Query: 633 PPXXXXPTSSPLXXXXPSPXSPPPXXLAXPQSTPTPXLXXHSTP 764
PP PT P P P S PP A P S P P L S P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMP-AGPPSAPPPPLPASSAP 1741
Score = 31.9 bits (69), Expect = 0.14
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = +1
Query: 547 PXXPPPGPXXTPPPXFXXFPXVXRXXPPTPXPSXXPPPPPS 669
P PPP PPP P PP P P+ P P+
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPN 1745
Score = 29.5 bits (63), Expect = 0.74
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = +1
Query: 541 PXPXXPPPGPXXTPPPXFXXFPXVXRXXP-PTPXPSXXPPPPPS 669
P PP TPPP P P P PS PPP P+
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPA 1737
Score = 26.2 bits (55), Expect = 6.9
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +1
Query: 538 PPXPXXPPPGPXXTPPPXFXXFPXVXRXXPPTP 636
PP P P T PP F V PP P
Sbjct: 1505 PPSSVAPATAPSSTLPPSQSSFAHVPSPAPPAP 1537
Score = 26.2 bits (55), Expect = 6.9
Identities = 18/66 (27%), Positives = 21/66 (31%), Gaps = 2/66 (3%)
Frame = +3
Query: 549 PXXPXGTSXHPPXPXXXVPXRSXXXXXXPPXXXXPT--SSPLXXXXPSPXSPPPXXLAXP 722
P P T P P P + PP P S+P P PPP +
Sbjct: 1683 PAHPVSTP--PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSA 1740
Query: 723 QSTPTP 740
S P P
Sbjct: 1741 PSVPNP 1746
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.7 bits (71), Expect = 0.080
Identities = 32/119 (26%), Positives = 36/119 (30%), Gaps = 1/119 (0%)
Frame = +3
Query: 420 AXPPVPXSXXLXAGHHPSIXXGXXTTASXPXRPRPFXXPPAX-PPXXPXGTSXHPPXPXX 596
A PPVP PS+ S P P P A PP P + P P
Sbjct: 1148 AAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP--KPAAGVPPVPPPSEAPPVPKPSV 1205
Query: 597 XVPXRSXXXXXXPPXXXXPTSSPLXXXXPSPXSPPPXXLAXPQSTPTPXLXXHSTPLPH 773
VP P PT S P P + P A P+ S P PH
Sbjct: 1206 GVPPVPPPSTAPP----VPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPH 1260
Score = 32.3 bits (70), Expect = 0.11
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = +1
Query: 526 SXXXPPXPXXPPPGPXXTPPPXFXXFPXVXRXXPPTPXPSXXPP-PPPS 669
S PP P P PP P PP P PS PP P PS
Sbjct: 1175 SSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPS 1223
Score = 31.1 bits (67), Expect = 0.24
Identities = 31/118 (26%), Positives = 39/118 (33%), Gaps = 3/118 (2%)
Frame = +3
Query: 426 PPVPXSXXLXAG-HHPSIXXGXXTTASXPXRPRPFXXPPAXPPXXPXGTSXHPPXPXXXV 602
PP+P S L + P S P P P A P P +S PP P
Sbjct: 971 PPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSP-AAPLARVPPVPKLSSKAPPVPLPSA 1029
Query: 603 PXRSXXXXXXPPXXXXPTSSPLXXXXPS--PXSPPPXXLAXPQSTPTPXLXXHSTPLP 770
P PTS+P S P +PPP A P+ + P+P
Sbjct: 1030 DAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVP-APSSEIPSIPAPSGAPPVP 1086
Score = 31.1 bits (67), Expect = 0.24
Identities = 31/125 (24%), Positives = 38/125 (30%), Gaps = 8/125 (6%)
Frame = +3
Query: 420 AXPPVPXSXXLXAGHHPSIXXGXXTTASX-PXRPRPFXXPPAXP-----PXXPXGTSXHP 581
A PPVP PS+ S P P+P P P P P + P
Sbjct: 1110 AVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAP 1169
Query: 582 PXPXXX--VPXRSXXXXXXPPXXXXPTSSPLXXXXPSPXSPPPXXLAXPQSTPTPXLXXH 755
P P +P PP + P+ PP A P PTP
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP--VPTPSAGLP 1227
Query: 756 STPLP 770
P+P
Sbjct: 1228 PVPVP 1232
Score = 30.7 bits (66), Expect = 0.32
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = +1
Query: 538 PPXPXXPPPGPXXTPPPXFXXFPXVXRXXPPTPXPSXXPPPPPS 669
PP P P PP P PP P P+ PP P+
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPA 1241
Score = 29.9 bits (64), Expect = 0.56
Identities = 24/90 (26%), Positives = 29/90 (32%), Gaps = 9/90 (10%)
Frame = +1
Query: 427 PLCRXPVXXLPATTRPXLXGXAXXXXXXXGQGXSXXXPPXPXXPP-----PGPXXTPP-P 588
P P +P+T P + G PP P P P PP P
Sbjct: 1027 PSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVP 1086
Query: 589 XFXXFPXVXRXX---PPTPXPSXXPPPPPS 669
P V + PP P PS PP P+
Sbjct: 1087 APSGIPPVPKPSVAAPPVPKPSVAVPPVPA 1116
Score = 29.5 bits (63), Expect = 0.74
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Frame = +1
Query: 538 PPXPXXPPPGPXXTPPPXFXXFPXVXRXXPPTPXPSXXPP-PPPS 669
PP P P P P PP P PS PP P PS
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPS 1165
Score = 29.1 bits (62), Expect = 0.98
Identities = 23/86 (26%), Positives = 27/86 (31%), Gaps = 3/86 (3%)
Frame = +3
Query: 522 PFXXPPAXPPXXPXGTSXHP---PXPXXXVPXRSXXXXXXPPXXXXPTSSPLXXXXPSPX 692
P P A P P ++ P P VP S PP P+S PS
Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGA 1082
Query: 693 SPPPXXLAXPQSTPTPXLXXHSTPLP 770
P P P P P + P P
Sbjct: 1083 PPVPAPSGIP-PVPKPSVAAPPVPKP 1107
Score = 29.1 bits (62), Expect = 0.98
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
Frame = +1
Query: 526 SXXXPPXPXXPPPGPXXTPPPXFXXFPXVXRXXPPTPXPSXXPP-PPPS 669
S PP P P P P PP P PS PP P PS
Sbjct: 1098 SVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPS 1146
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +1
Query: 538 PPXPXXPPPGPXXTPPPXFXXFPXVXRXXPPTPXPSXXPPPPP 666
PP P P P P PP P PS PP P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP 1182
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Frame = +1
Query: 541 PXPXXPPPGPXXTPPPXFXXFPXVXRXXPPTPXPSXXPP-PPPS 669
P P P P P P PP P PS PP P PS
Sbjct: 1162 PKPSVAAP-PVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPS 1204
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +1
Query: 526 SXXXPPXPXXPPPGPXXTPPPXFXXFPXVXRXXPPTPXPSXXPP 657
S PP P P TP P PP P PS P
Sbjct: 1204 SVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAP 1247
Score = 27.9 bits (59), Expect = 2.3
Identities = 26/110 (23%), Positives = 35/110 (31%), Gaps = 6/110 (5%)
Frame = +3
Query: 426 PPVPXSXXLXAGHHPSIXXGXXTTASXPXRPRPFXXPPAXPPXX----PXGTSXHPPXPX 593
PPVP S P + ++ P P P PP P P + PP P
Sbjct: 1050 PPVPKSSSGAPSAPPPVPA---PSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPK 1106
Query: 594 XXVPXRSXXXXXXPPXXXXPT--SSPLXXXXPSPXSPPPXXLAXPQSTPT 737
V P P+ + P+ +P P P A P P+
Sbjct: 1107 PSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPS 1156
Score = 27.9 bits (59), Expect = 2.3
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = +1
Query: 541 PXPXXPPPGPXXTPPPXFXXFPXVXRXXPPTPXPSXXPP-PPPS 669
P P P P PP P PP P PS PP P PS
Sbjct: 1088 PSGIPPVPKPSVAAPPV----PKPSVAVPPVPAPSGAPPVPKPS 1127
Score = 27.5 bits (58), Expect = 3.0
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +1
Query: 526 SXXXPPXPXXPPPGPXXTPPPXFXXFPXVXRXXPPTPXPSXXPPPPP 666
S PP P P P P PP P P+ PP P
Sbjct: 1146 SVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVP 1192
Score = 26.6 bits (56), Expect = 5.2
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +1
Query: 538 PPXPXXPPPGPXXTPPPXFXXFPXVXRXXPPTPXPSXXPPPPPS 669
PP P P P V PP P P+ PP P S
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKS 1055
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.7 bits (71), Expect = 0.080
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
Frame = +1
Query: 538 PPXPXXPPPGPXXTPPPXFXXFPXVXRXXPPTPXP---SXXPPPPP 666
PP P P P P P P + PP P P PPPPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 31.5 bits (68), Expect = 0.18
Identities = 18/43 (41%), Positives = 19/43 (44%)
Frame = +1
Query: 541 PXPXXPPPGPXXTPPPXFXXFPXVXRXXPPTPXPSXXPPPPPS 669
P P PPP P PP P V PP P PPPPP+
Sbjct: 748 PIPV-PPPAPIMGGPPPPPPPPGVAGAGPPPP-----PPPPPA 784
Score = 26.6 bits (56), Expect = 5.2
Identities = 17/57 (29%), Positives = 20/57 (35%)
Frame = +3
Query: 570 SXHPPXPXXXVPXRSXXXXXXPPXXXXPTSSPLXXXXPSPXSPPPXXLAXPQSTPTP 740
S PP P VP + PP +P+ P P PP A P P P
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPP------APIMGGPPPPPPPPGVAGAGPPPPPPP 781
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 29.1 bits (62), Expect = 0.98
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = -1
Query: 306 AIALPSTTNPKAKAGCDSTTASFPLYGTTELTPSHTRNAVASSSETSARHHRRTQPDKPR 127
+++ S P+ A D+T++S P TTE S T + SS + SA T P
Sbjct: 413 SLSKESPVEPEKPALPDATSSSTP---TTENKESWTNQGIKSSQQRSANASPATSPSNQA 469
Query: 126 GVSSS 112
+ +S
Sbjct: 470 SIHAS 474
>SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 843
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -1
Query: 309 NAIALPSTTNPKAKAGCDSTTASFPLYGTTELTPSHTRNAVASSSETSAR 160
N + +T A G T+S YG+T + H RN++A S+ +
Sbjct: 513 NVVTTQTTHEEDALIGSSINTSSHQHYGSTLNSTPHRRNSIALSNRAHVK 562
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Frame = +1
Query: 538 PPXPXXPPPGPXXTPPPXFXXFPXVXRXXPPT-PXPSXXPPPPP 666
PP P PG PPP P PP P PPPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHE-PGEHMPPPPMHHEPGEHMPPPP 250
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Frame = +1
Query: 538 PPXPXXPPPGPXXTPPPXFXXFPXVXRXXPPT-PXPSXXPPPPP 666
PP P PG PPP P PP P PPPP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHE-PGEHMPPPPMHHEPGEHMPPPP 289
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Frame = +1
Query: 538 PPXPXXPPPGPXXTPPPXFXXFPXVXRXXPPT-PXPSXXPPPPP 666
PP P PG PPP P PP P PPPP
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHE-PGEHMPPPPMHHEPGEHMPPPP 328
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 28.3 bits (60), Expect = 1.7
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -2
Query: 665 GGGGGXXXGXGVGGXXRXTXGNXXXXGGGVXXGPGGGXXGXGG 537
GGG G G G GG G GG G GG G GG
Sbjct: 29 GGGRGGARGGGRGGARGGRGGR-----GGARGGRGGSSGGRGG 66
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.5 bits (58), Expect = 3.0
Identities = 19/47 (40%), Positives = 19/47 (40%), Gaps = 4/47 (8%)
Frame = -2
Query: 665 GGGGGXXXGXG--VGGXXRXTXGNXXXXGG--GVXXGPGGGXXGXGG 537
GG GG G G GG G GG G GPGG G GG
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGG 267
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 4.0
Identities = 19/61 (31%), Positives = 22/61 (36%), Gaps = 13/61 (21%)
Frame = +1
Query: 526 SXXXPPXPXXPPPG------PXXTPPPXFXXFPXVXRXXPPT-------PXPSXXPPPPP 666
S PP P PPP P + V PPT P P+ PPPPP
Sbjct: 185 SDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPP 244
Query: 667 S 669
+
Sbjct: 245 T 245
Score = 26.6 bits (56), Expect = 5.2
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +1
Query: 547 PXXPPPGPXXTPPPXFXXFPXVXRXXPPTPXPSXXPPPPP 666
P P +PPP F P P T PS PPPP
Sbjct: 156 PTVSAPNSMVSPPPSFQP-PSAAA--PATSLPSDYNPPPP 192
Score = 25.8 bits (54), Expect = 9.1
Identities = 20/71 (28%), Positives = 23/71 (32%)
Frame = +3
Query: 534 PPAXPPXXPXGTSXHPPXPXXXVPXRSXXXXXXPPXXXXPTSSPLXXXXPSPXSPPPXXL 713
PP PP + P PP + PL P+P PPP
Sbjct: 191 PPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPL----PAPPPPPPPT- 245
Query: 714 AXPQSTPTPXL 746
PQST T L
Sbjct: 246 LPPQSTNTSQL 256
>SPBC1289.16c ||SPBC8E4.06|copper amine oxidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 794
Score = 26.6 bits (56), Expect = 5.2
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 98 HMPSTDEDTPRGLSGWV 148
+ P +DTP+GLS W+
Sbjct: 565 YAPQASDDTPKGLSKWI 581
>SPAC977.17 |||MIP water channel|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 26.2 bits (55), Expect = 6.9
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +2
Query: 146 VRRWWRALVSELLATAFLVWLGVSSVVPYKGKEAVVLSHPA--FAFGFVVLGNAMAFGPT 319
+R ++R +E L T LV GV S + S + FA+GF + G
Sbjct: 306 IRHFFREGFAEFLGTLVLVVFGVGSNLQATVTNGAGGSFESLSFAWGFGCMLGVYIAGGI 365
Query: 320 SGAHMN 337
SG H+N
Sbjct: 366 SGGHVN 371
>SPAC2E1P3.05c |||fungal cellulose binding domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 197
Score = 26.2 bits (55), Expect = 6.9
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = -1
Query: 294 PSTTNPKAKAGCDSTTASFPLYGTTELTPSHTRNAVASSS 175
PS+++ A + STT+S L +T LT S + +AV+S++
Sbjct: 110 PSSSSSSAASSTTSTTSSSSLVSSTTLT-SSSPSAVSSTT 148
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 26.2 bits (55), Expect = 6.9
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = -2
Query: 665 GGGGGXXXGXGVGGXXRXTXGNXXXXGGGVXXGPGGGXXG 546
GG GG G G G+ GGG G GG G
Sbjct: 145 GGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRG 184
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 26.2 bits (55), Expect = 6.9
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +1
Query: 520 GXSXXXPPXPXXPPPGPXXTPPPXFXXFPXVXRXXPPTPXPSXXPPP 660
G S PP PP G P P P + PP P PP
Sbjct: 488 GTSAPLPPTTFAPP-GVPLPPIPGAPGMPNLNMSQPPMVPPGMALPP 533
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 26.2 bits (55), Expect = 6.9
Identities = 21/72 (29%), Positives = 22/72 (30%)
Frame = +3
Query: 558 PXGTSXHPPXPXXXVPXRSXXXXXXPPXXXXPTSSPLXXXXPSPXSPPPXXLAXPQSTPT 737
P S HPP +P PP P S PSP P P
Sbjct: 132 PFPHSHHPPL-HNPLPVSCQPVLRPPPVPQVP-SHWYPVSLPSPNLPHQPISKPPVIPNL 189
Query: 738 PXLXXHSTPLPH 773
P L H LPH
Sbjct: 190 PKLQVHPNRLPH 201
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 25.8 bits (54), Expect = 9.1
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = +1
Query: 541 PXPXXPPPGPXXTPPPXFXXFPXVXRXXPPTPXPSXXPP 657
P P PP P +P + P P +P PS P
Sbjct: 576 PSPLSLPPEPLLSPTIDYSATPFPLEPPPESPGPSLQIP 614
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,409,741
Number of Sequences: 5004
Number of extensions: 41225
Number of successful extensions: 338
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 262
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 495302128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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