Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_D07
(1312 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 40 0.005
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 31 1.8
L14331-8|AAA28100.1| 586|Caenorhabditis elegans C.elegans homeo... 29 7.3
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 39.5 bits (88), Expect = 0.005
Identities = 24/74 (32%), Positives = 28/74 (37%)
Frame = +1
Query: 358 PKIKKXPXSKPXLXXXPXPPXXXXPYKNXHPXLYPSPIFXXFPPKHPXXTPSTXNHP*KX 537
PK K P KP L P P P+ P L+P P+ FP P P + P
Sbjct: 52 PKHKPKPFPKPMLFPKPMPKHKPKPFPK--PMLFPKPM--PFPKPMPKSKPKSEPFPNPM 107
Query: 538 PXTXXXPPXNHKQK 579
P P HK K
Sbjct: 108 PFPKPKPMPKHKPK 121
Score = 33.5 bits (73), Expect = 0.34
Identities = 22/78 (28%), Positives = 25/78 (32%), Gaps = 4/78 (5%)
Frame = +1
Query: 358 PKIKKXPXSKPXLXXXPXPPXXXXPYKNX----HPXLYPSPIFXXFPPKHPXXTPSTXNH 525
PK K P KP L P P P+ P +P P+ P P P
Sbjct: 116 PKHKPKPFPKPMLFPKPMPIPKPMPFPKPMLFPKPMPFPKPMPKSKPKSEPFPNPMPFPK 175
Query: 526 P*KXPXTXXXPPXNHKQK 579
P P P HK K
Sbjct: 176 PMPKPKPKPKPMPKHKPK 193
Score = 30.3 bits (65), Expect = 3.1
Identities = 20/74 (27%), Positives = 21/74 (28%)
Frame = +1
Query: 358 PKIKKXPXSKPXLXXXPXPPXXXXPYKNXHPXLYPSPIFXXFPPKHPXXTPSTXNHP*KX 537
P+ K P KP P P P P P P P P P P
Sbjct: 2 PEPKSKPTPKPKSEPFPKPMPKSKPKSEPFPSPMPFPKPMPKPKPKPKPMPKHKPKPFPK 61
Query: 538 PXTXXXPPXNHKQK 579
P P HK K
Sbjct: 62 PMLFPKPMPKHKPK 75
Score = 29.9 bits (64), Expect = 4.2
Identities = 21/78 (26%), Positives = 25/78 (32%), Gaps = 2/78 (2%)
Frame = +1
Query: 352 SXPKIKKXPXSKPXLXXXPXPPXXXXPYKNXHPXLYPSPIFXXFP-PKH-PXXTPSTXNH 525
S PK + P P P P P P +P P+ P PKH P P
Sbjct: 24 SKPKSEPFPSPMPFPKPMPKPKPKPKPMPKHKPKPFPKPMLFPKPMPKHKPKPFPKPMLF 83
Query: 526 P*KXPXTXXXPPXNHKQK 579
P P P K +
Sbjct: 84 PKPMPFPKPMPKSKPKSE 101
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 31.1 bits (67), Expect = 1.8
Identities = 20/74 (27%), Positives = 22/74 (29%)
Frame = +1
Query: 358 PKIKKXPXSKPXLXXXPXPPXXXXPYKNXHPXLYPSPIFXXFPPKHPXXTPSTXNHP*KX 537
PK+K P KP P P P + P P P P P P P
Sbjct: 155 PKLKSKPNPKPEPKPKPKPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPK 214
Query: 538 PXTXXXPPXNHKQK 579
P P K K
Sbjct: 215 PKPEPKPKPKPKPK 228
Score = 31.1 bits (67), Expect = 1.8
Identities = 22/76 (28%), Positives = 27/76 (35%), Gaps = 2/76 (2%)
Frame = +1
Query: 358 PKIKKXPXSKPXLXXXPXPPXXXXPYKNXHPXLYPSPIFXXFP-PKH-PXXTPSTXNHP* 531
PK K P K L P P P +P P+P+ P PKH P P P
Sbjct: 247 PKPKPEPKPKTKLKSEPKPKPKLKPKPKPNPKPEPNPMPELKPKPKHKPNSRPKPNPRPK 306
Query: 532 KXPXTXXXPPXNHKQK 579
P + P + K
Sbjct: 307 PKPRSKPNPKPKPRPK 322
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/74 (27%), Positives = 21/74 (28%)
Frame = +1
Query: 358 PKIKKXPXSKPXLXXXPXPPXXXXPYKNXHPXLYPSPIFXXFPPKHPXXTPSTXNHP*KX 537
PK K P KP P P P P P P P P P+ P
Sbjct: 185 PKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPKPNPNPKPEPKPK 244
Query: 538 PXTXXXPPXNHKQK 579
P P K K
Sbjct: 245 PKPKPKPEPKPKTK 258
Score = 29.5 bits (63), Expect = 5.5
Identities = 19/72 (26%), Positives = 22/72 (30%)
Frame = +1
Query: 358 PKIKKXPXSKPXLXXXPXPPXXXXPYKNXHPXLYPSPIFXXFPPKHPXXTPSTXNHP*KX 537
PK + P KP P P P N +P P P P P + P
Sbjct: 207 PKPEPKPKPKPEPKPKPKPKPKPKPKPNPNPKPEPKPKPKPKPKPEPKPKTKLKSEPKPK 266
Query: 538 PXTXXXPPXNHK 573
P P N K
Sbjct: 267 PKLKPKPKPNPK 278
Score = 29.1 bits (62), Expect = 7.3
Identities = 20/74 (27%), Positives = 21/74 (28%)
Frame = +1
Query: 358 PKIKKXPXSKPXLXXXPXPPXXXXPYKNXHPXLYPSPIFXXFPPKHPXXTPSTXNHP*KX 537
PK + P KP P P P N P P P P P P P
Sbjct: 171 PKPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPK 230
Query: 538 PXTXXXPPXNHKQK 579
P P K K
Sbjct: 231 PKPNPNPKPEPKPK 244
Score = 28.7 bits (61), Expect = 9.6
Identities = 20/72 (27%), Positives = 20/72 (27%)
Frame = +1
Query: 358 PKIKKXPXSKPXLXXXPXPPXXXXPYKNXHPXLYPSPIFXXFPPKHPXXTPSTXNHP*KX 537
PK K P KP P P P P P P P P P P
Sbjct: 167 PKPKPKPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPK 226
Query: 538 PXTXXXPPXNHK 573
P P N K
Sbjct: 227 PKPKPKPNPNPK 238
Score = 28.7 bits (61), Expect = 9.6
Identities = 20/74 (27%), Positives = 21/74 (28%)
Frame = +1
Query: 358 PKIKKXPXSKPXLXXXPXPPXXXXPYKNXHPXLYPSPIFXXFPPKHPXXTPSTXNHP*KX 537
PK K P KP P P P P P P P P P+ P
Sbjct: 183 PKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPKPNPNPKPEPK 242
Query: 538 PXTXXXPPXNHKQK 579
P P K K
Sbjct: 243 PKPKPKPKPEPKPK 256
>L14331-8|AAA28100.1| 586|Caenorhabditis elegans C.elegans homeobox
protein 26 protein.
Length = 586
Score = 29.1 bits (62), Expect = 7.3
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +1
Query: 412 PPXXXXPYKNXHPXLYPSPIFXXFPPKHP 498
PP P HP +P+F PP HP
Sbjct: 294 PPQIPQPPPQFHPIFPANPLFHMAPPHHP 322
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,770,488
Number of Sequences: 27780
Number of extensions: 145578
Number of successful extensions: 351
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 297
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3663150656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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