Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_D06
(1390 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 41 0.002
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 37 0.029
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 37 0.029
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 37 0.029
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.21
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.21
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 0.47
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 26 1.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.9
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.9
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 2.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 2.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 2.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 2.6
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 27 5.4
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 5.9
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 5.9
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 5.9
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 29 7.8
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 40.7 bits (91), Expect = 0.002
Identities = 29/92 (31%), Positives = 31/92 (33%), Gaps = 4/92 (4%)
Frame = -3
Query: 299 PLSAXPPXPXPGGXAXRXXXXXXPRPXPXXV----PPXSXXXXXXSGGXXVLXXXXPPXX 132
P + PP P P R PRP P V PP + G V PP
Sbjct: 508 PPTPPPPAPGPHKEQRRSTSKDPPRPAPPPVSSIPPPPPIAGLLAANGTNV---PIPPPP 564
Query: 131 XPXXXXVLFLXXGGPPXXXPXXGGGXXPPPPP 36
P L PP P GG PPPPP
Sbjct: 565 PPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPP 596
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.1 bits (82), Expect = 0.029
Identities = 25/84 (29%), Positives = 30/84 (35%), Gaps = 2/84 (2%)
Frame = -3
Query: 281 PXPXPGGXAXRXXXXXXPRPXPXXVPPXSXXXXXXS--GGXXVLXXXXPPXXXPXXXXVL 108
P GG + P P P +PP + GG + PP P +
Sbjct: 696 PSTSAGGSSALPPITGGP-PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPI 754
Query: 107 FLXXGGPPXXXPXXGGGXXPPPPP 36
GGPP P GG PPPPP
Sbjct: 755 ---SGGPPPPPPPPGGCPPPPPPP 775
Score = 34.3 bits (75), Expect = 0.21
Identities = 29/95 (30%), Positives = 32/95 (33%), Gaps = 2/95 (2%)
Frame = -3
Query: 299 PLSAXPPXPXPGGXAXRXXXXXXPRPXPXXVPPXSXXXXXXSGGXXVLXXXXPPXXXPXX 120
P++ PP P P G P P P +PP S GG PP P
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPIS-------GGPP--PPPPPPGGCPP- 770
Query: 119 XXVLFLXXGGPPXXXPXXG--GGXXPPPPPXXXXP 21
PP P G GG PPPPP P
Sbjct: 771 ----------PPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 29.1 bits (62), Expect = 7.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 89 PPXXXPXXGGGXXPPPPPXXXXP 21
PP P GG PPPPP P
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPP 737
Score = 27.1 bits (57), Expect(2) = 0.12
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 497 PXGXXPATRRWGXXHAPPXXXXRAXXXXRPPPPPPP 390
P G P T G PP PPPPPPP
Sbjct: 716 PPGLPPIT---GGPPPPPPPGGLPPITGGPPPPPPP 748
Score = 26.6 bits (56), Expect(2) = 0.12
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3
Query: 410 PPPPPPPXXXXXGG 369
PPPPPPP GG
Sbjct: 770 PPPPPPPPGGFKGG 783
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.1 bits (82), Expect = 0.029
Identities = 25/84 (29%), Positives = 30/84 (35%), Gaps = 2/84 (2%)
Frame = -3
Query: 281 PXPXPGGXAXRXXXXXXPRPXPXXVPPXSXXXXXXS--GGXXVLXXXXPPXXXPXXXXVL 108
P GG + P P P +PP + GG + PP P +
Sbjct: 696 PSTSAGGSSALPPITGGP-PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPI 754
Query: 107 FLXXGGPPXXXPXXGGGXXPPPPP 36
GGPP P GG PPPPP
Sbjct: 755 ---SGGPPPPPPPPGGCPPPPPPP 775
Score = 34.3 bits (75), Expect = 0.21
Identities = 29/95 (30%), Positives = 32/95 (33%), Gaps = 2/95 (2%)
Frame = -3
Query: 299 PLSAXPPXPXPGGXAXRXXXXXXPRPXPXXVPPXSXXXXXXSGGXXVLXXXXPPXXXPXX 120
P++ PP P P G P P P +PP S GG PP P
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPIS-------GGPP--PPPPPPGGCPP- 770
Query: 119 XXVLFLXXGGPPXXXPXXG--GGXXPPPPPXXXXP 21
PP P G GG PPPPP P
Sbjct: 771 ----------PPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 29.1 bits (62), Expect = 7.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 89 PPXXXPXXGGGXXPPPPPXXXXP 21
PP P GG PPPPP P
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPP 737
Score = 27.1 bits (57), Expect(2) = 0.12
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 497 PXGXXPATRRWGXXHAPPXXXXRAXXXXRPPPPPPP 390
P G P T G PP PPPPPPP
Sbjct: 716 PPGLPPIT---GGPPPPPPPGGLPPITGGPPPPPPP 748
Score = 26.6 bits (56), Expect(2) = 0.12
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3
Query: 410 PPPPPPPXXXXXGG 369
PPPPPPP GG
Sbjct: 770 PPPPPPPPGGFKGG 783
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.1 bits (82), Expect = 0.029
Identities = 25/84 (29%), Positives = 30/84 (35%), Gaps = 2/84 (2%)
Frame = -3
Query: 281 PXPXPGGXAXRXXXXXXPRPXPXXVPPXSXXXXXXS--GGXXVLXXXXPPXXXPXXXXVL 108
P GG + P P P +PP + GG + PP P +
Sbjct: 279 PSTSAGGSSALPPITGGP-PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPI 337
Query: 107 FLXXGGPPXXXPXXGGGXXPPPPP 36
GGPP P GG PPPPP
Sbjct: 338 ---SGGPPPPPPPPGGCPPPPPPP 358
Score = 34.3 bits (75), Expect = 0.21
Identities = 29/95 (30%), Positives = 32/95 (33%), Gaps = 2/95 (2%)
Frame = -3
Query: 299 PLSAXPPXPXPGGXAXRXXXXXXPRPXPXXVPPXSXXXXXXSGGXXVLXXXXPPXXXPXX 120
P++ PP P P G P P P +PP S GG PP P
Sbjct: 304 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPIS-------GGPP--PPPPPPGGCPP- 353
Query: 119 XXVLFLXXGGPPXXXPXXG--GGXXPPPPPXXXXP 21
PP P G GG PPPPP P
Sbjct: 354 ----------PPPPPPPGGFKGGPPPPPPPGMFAP 378
Score = 29.1 bits (62), Expect = 7.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 89 PPXXXPXXGGGXXPPPPPXXXXP 21
PP P GG PPPPP P
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPP 320
Score = 27.1 bits (57), Expect(2) = 0.13
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 497 PXGXXPATRRWGXXHAPPXXXXRAXXXXRPPPPPPP 390
P G P T G PP PPPPPPP
Sbjct: 299 PPGLPPIT---GGPPPPPPPGGLPPITGGPPPPPPP 331
Score = 26.6 bits (56), Expect(2) = 0.13
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3
Query: 410 PPPPPPPXXXXXGG 369
PPPPPPP GG
Sbjct: 353 PPPPPPPPGGFKGG 366
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.3 bits (75), Expect = 0.21
Identities = 23/84 (27%), Positives = 26/84 (30%), Gaps = 5/84 (5%)
Frame = -2
Query: 276 PXPGRXCXPXRVXLXSPAPPX-----PXXXXXPXXPXXXRWXXGSXFXXPPRXXPXXXXX 112
P PGR P + P PP P P P G PP P
Sbjct: 302 PPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPG 361
Query: 111 XFPXXXGXPPXXPXTGXGXXPPXP 40
+P P P +G G PP P
Sbjct: 362 MYPPPPPSRPPAPPSGHGMIPPPP 385
Score = 29.5 bits (63), Expect = 5.9
Identities = 24/89 (26%), Positives = 26/89 (29%), Gaps = 1/89 (1%)
Frame = -3
Query: 284 PPXPXPGGXAXRXXXXXXPRPXPXXVPPXSXXXXXXSGGXXVLXXXXPPXXXPXXXXVLF 105
PP P P P P PP S G PP P +
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPP-----SSGMWPPPPPPPPGRTPGPPGMPG 315
Query: 104 LXXGGPPXXXPXXG-GGXXPPPPPXXXXP 21
+ PP G GG PPPPP P
Sbjct: 316 MPPPPPPSRFGPPGMGGMPPPPPPGMRYP 344
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.21
Identities = 23/84 (27%), Positives = 26/84 (30%), Gaps = 5/84 (5%)
Frame = -2
Query: 276 PXPGRXCXPXRVXLXSPAPPX-----PXXXXXPXXPXXXRWXXGSXFXXPPRXXPXXXXX 112
P PGR P + P PP P P P G PP P
Sbjct: 312 PPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPG 371
Query: 111 XFPXXXGXPPXXPXTGXGXXPPXP 40
+P P P +G G PP P
Sbjct: 372 MYPPPPPSRPPAPPSGHGMIPPPP 395
Score = 29.5 bits (63), Expect = 5.9
Identities = 24/89 (26%), Positives = 26/89 (29%), Gaps = 1/89 (1%)
Frame = -3
Query: 284 PPXPXPGGXAXRXXXXXXPRPXPXXVPPXSXXXXXXSGGXXVLXXXXPPXXXPXXXXVLF 105
PP P P P P PP S G PP P +
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPP-----SSGMWPPPPPPPPGRTPGPPGMPG 325
Query: 104 LXXGGPPXXXPXXG-GGXXPPPPPXXXXP 21
+ PP G GG PPPPP P
Sbjct: 326 MPPPPPPSRFGPPGMGGMPPPPPPGMRYP 354
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 27.9 bits (59), Expect(2) = 0.47
Identities = 22/83 (26%), Positives = 24/83 (28%)
Frame = -3
Query: 284 PPXPXPGGXAXRXXXXXXPRPXPXXVPPXSXXXXXXSGGXXVLXXXXPPXXXPXXXXVLF 105
PP P G A P P P P + + PP P L
Sbjct: 504 PPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPPLP---LD 560
Query: 104 LXXGGPPXXXPXXGGGXXPPPPP 36
L G GG PPPPP
Sbjct: 561 LLKGAVAGLKSVPGGPPPPPPPP 583
Score = 23.8 bits (49), Expect(2) = 0.47
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -3
Query: 455 HAPPXXXXRAXXXXRPPPPPPP 390
+APP + P PPPPP
Sbjct: 486 NAPPPPPMPSINGHAPNPPPPP 507
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 25.8 bits (54), Expect(2) = 1.6
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 452 APPXXXXRAXXXXRPPPPPPP 390
APP PPPPPPP
Sbjct: 40 APPPPPMCGCAPPPPPPPPPP 60
Score = 24.2 bits (50), Expect(2) = 1.6
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 410 PPPPPPPXXXXXG 372
PPPPPPP G
Sbjct: 53 PPPPPPPPMCGCG 65
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.1 bits (67), Expect = 1.9
Identities = 20/65 (30%), Positives = 21/65 (32%)
Frame = -3
Query: 230 PRPXPXXVPPXSXXXXXXSGGXXVLXXXXPPXXXPXXXXVLFLXXGGPPXXXPXXGGGXX 51
P P VPP S G + PP P PP P G G
Sbjct: 601 PENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPP-----------PPMGLPAVGAGAP 649
Query: 50 PPPPP 36
PPPPP
Sbjct: 650 PPPPP 654
Score = 29.5 bits (63), Expect = 5.9
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 449 PPXXXXRAXXXXRPPPPPPPXXXXXGG 369
PP A PPPPPPP GG
Sbjct: 636 PPPMGLPAVGAGAPPPPPPPPPSGAGG 662
Score = 24.2 bits (50), Expect(2) = 8.3
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 410 PPPPPPPXXXXXG 372
PPPPPPP G
Sbjct: 609 PPPPPPPPPQSFG 621
Score = 23.0 bits (47), Expect(2) = 8.3
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 413 RPPPPPP 393
RPPPPPP
Sbjct: 573 RPPPPPP 579
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.1 bits (67), Expect = 1.9
Identities = 20/65 (30%), Positives = 21/65 (32%)
Frame = -3
Query: 230 PRPXPXXVPPXSXXXXXXSGGXXVLXXXXPPXXXPXXXXVLFLXXGGPPXXXPXXGGGXX 51
P P VPP S G + PP P PP P G G
Sbjct: 427 PENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPP-----------PPMGLPAVGAGAP 475
Query: 50 PPPPP 36
PPPPP
Sbjct: 476 PPPPP 480
Score = 29.5 bits (63), Expect = 5.9
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 449 PPXXXXRAXXXXRPPPPPPPXXXXXGG 369
PP A PPPPPPP GG
Sbjct: 462 PPPMGLPAVGAGAPPPPPPPPPSGAGG 488
Score = 24.2 bits (50), Expect(2) = 8.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 410 PPPPPPPXXXXXG 372
PPPPPPP G
Sbjct: 435 PPPPPPPPPQSFG 447
Score = 23.0 bits (47), Expect(2) = 8.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 413 RPPPPPP 393
RPPPPPP
Sbjct: 399 RPPPPPP 405
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 30.7 bits (66), Expect = 2.6
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = -3
Query: 521 PXRXRXXAPXGXXPATRRWGXXHAPPXXXXRAXXXXRPPPPPPPXXXXXGG 369
P R P P R G H PP R PPPP GG
Sbjct: 758 PPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPPPHFDRRGGG 808
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 2.6
Identities = 28/125 (22%), Positives = 31/125 (24%), Gaps = 1/125 (0%)
Frame = -3
Query: 410 PPPPPPPXXXXXGGXXVAXXXXXVXXRXLXXSXFXXXPLSAXPPXPXPGGXAXRXXXXXX 231
PPPPPP G + P + PP P GG
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 230 PRPXP-XXVPPXSXXXXXXSGGXXVLXXXXPPXXXPXXXXVLFLXXGGPPXXXPXXGGGX 54
P P P PP +GG P P PP P G
Sbjct: 298 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQ--APERSPPTGSPPTGSPP 355
Query: 53 XPPPP 39
PP
Sbjct: 356 TGRPP 360
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 2.6
Identities = 28/125 (22%), Positives = 31/125 (24%), Gaps = 1/125 (0%)
Frame = -3
Query: 410 PPPPPPPXXXXXGGXXVAXXXXXVXXRXLXXSXFXXXPLSAXPPXPXPGGXAXRXXXXXX 231
PPPPPP G + P + PP P GG
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 230 PRPXP-XXVPPXSXXXXXXSGGXXVLXXXXPPXXXPXXXXVLFLXXGGPPXXXPXXGGGX 54
P P P PP +GG P P PP P G
Sbjct: 319 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQ--APERSPPTGSPPTGSPP 376
Query: 53 XPPPP 39
PP
Sbjct: 377 TGRPP 381
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 2.6
Identities = 28/125 (22%), Positives = 31/125 (24%), Gaps = 1/125 (0%)
Frame = -3
Query: 410 PPPPPPPXXXXXGGXXVAXXXXXVXXRXLXXSXFXXXPLSAXPPXPXPGGXAXRXXXXXX 231
PPPPPP G + P + PP P GG
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 230 PRPXP-XXVPPXSXXXXXXSGGXXVLXXXXPPXXXPXXXXVLFLXXGGPPXXXPXXGGGX 54
P P P PP +GG P P PP P G
Sbjct: 304 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQ--APERSPPTGSPPTGSPP 361
Query: 53 XPPPP 39
PP
Sbjct: 362 TGRPP 366
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 26.6 bits (56), Expect(2) = 5.4
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3
Query: 410 PPPPPPPXXXXXGG 369
PPPPPPP GG
Sbjct: 154 PPPPPPPLMGGSGG 167
Score = 21.4 bits (43), Expect(2) = 5.4
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = -3
Query: 446 PXXXXRAXXXXRPPPPPP 393
P R PPPPPP
Sbjct: 143 PPRHHRQYDPLPPPPPPP 160
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.5 bits (63), Expect = 5.9
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Frame = -3
Query: 143 PPXXXPXXXXVLFLXXGG--PPXXXPXXGGGXXPPPPP 36
PP P + + G PP P G G PPPPP
Sbjct: 215 PPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPP 252
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.5 bits (63), Expect = 5.9
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Frame = -3
Query: 143 PPXXXPXXXXVLFLXXGG--PPXXXPXXGGGXXPPPPP 36
PP P + + G PP P G G PPPPP
Sbjct: 201 PPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPP 238
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.5 bits (63), Expect = 5.9
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Frame = -3
Query: 143 PPXXXPXXXXVLFLXXGG--PPXXXPXXGGGXXPPPPP 36
PP P + + G PP P G G PPPPP
Sbjct: 201 PPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPP 238
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 29.1 bits (62), Expect = 7.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 95 GGPPXXXPXXGGGXXPPPPP 36
G PP GGG PPPPP
Sbjct: 34 GPPPACGNPCGGGFGPPPPP 53
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.140 0.449
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,141,543
Number of Sequences: 27780
Number of extensions: 192610
Number of successful extensions: 2251
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1587
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3933724284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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