Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_C20
(872 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 132 3e-31
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 132 3e-31
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 111 8e-25
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 111 8e-25
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 73 3e-13
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 65 5e-11
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 65 5e-11
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 62 5e-10
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 62 5e-10
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 62 5e-10
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 61 1e-09
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 61 1e-09
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 56 3e-08
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 55 6e-08
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 55 6e-08
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 53 3e-07
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 53 3e-07
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 53 3e-07
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 53 3e-07
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 52 5e-07
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 50 2e-06
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 49 4e-06
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 48 9e-06
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 43 3e-04
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 42 6e-04
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 42 8e-04
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 41 0.001
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 41 0.001
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 41 0.001
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 41 0.001
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 41 0.001
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 40 0.002
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 40 0.002
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 40 0.002
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 40 0.002
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 39 0.005
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 38 0.012
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 38 0.012
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 38 0.012
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 38 0.012
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 38 0.012
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 38 0.012
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 38 0.012
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 38 0.012
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 34 0.15
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 33 0.20
AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical ... 31 0.81
AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical ... 31 1.1
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 30 2.5
Z81132-6|CAB03437.1| 315|Caenorhabditis elegans Hypothetical pr... 29 5.7
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 29 5.7
AL023835-15|CAA19492.2| 520|Caenorhabditis elegans Hypothetical... 29 5.7
AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical ... 29 5.7
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 28 7.6
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 28 7.6
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 28 7.6
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 28 7.6
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 132 bits (319), Expect = 3e-31
Identities = 64/98 (65%), Positives = 75/98 (76%)
Frame = +1
Query: 325 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIXLGDXL 504
K RDVIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV+ LGD +
Sbjct: 62 KARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYM 121
Query: 505 NAKCHACIGGTXVREDIRQLESXXXXXXXXXXXXYDMI 618
N +CHACIGGT + EDIR+L+ +DMI
Sbjct: 122 NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMI 159
Score = 62.5 bits (145), Expect = 4e-10
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +3
Query: 210 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGTR 335
V+ TFD M L+E+LLRGIYAYGFEKPSAIQQRA+ P I R
Sbjct: 24 VIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAV-PAILKAR 64
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 132 bits (319), Expect = 3e-31
Identities = 64/98 (65%), Positives = 75/98 (76%)
Frame = +1
Query: 325 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIXLGDXL 504
K RDVIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV+ LGD +
Sbjct: 62 KARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYM 121
Query: 505 NAKCHACIGGTXVREDIRQLESXXXXXXXXXXXXYDMI 618
N +CHACIGGT + EDIR+L+ +DMI
Sbjct: 122 NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMI 159
Score = 62.5 bits (145), Expect = 4e-10
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +3
Query: 210 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGTR 335
++ TFD M L+E+LLRGIYAYGFEKPSAIQQRAI P I R
Sbjct: 24 IIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAI-PAILKAR 64
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 111 bits (266), Expect = 8e-25
Identities = 55/81 (67%), Positives = 65/81 (80%)
Frame = +1
Query: 328 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIXLGDXLN 507
G+DVIAQAQSGTGKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ LG+ LN
Sbjct: 66 GKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN 125
Query: 508 AKCHACIGGTXVREDIRQLES 570
CIGGT VR+D R+LE+
Sbjct: 126 VNILPCIGGTSVRDDQRKLEA 146
Score = 81.0 bits (191), Expect = 1e-15
Identities = 35/49 (71%), Positives = 43/49 (87%)
Frame = +3
Query: 183 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG 329
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC G
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTG 66
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 111 bits (266), Expect = 8e-25
Identities = 55/81 (67%), Positives = 65/81 (80%)
Frame = +1
Query: 328 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIXLGDXLN 507
G+DVIAQAQSGTGKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ LG+ LN
Sbjct: 66 GKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN 125
Query: 508 AKCHACIGGTXVREDIRQLES 570
CIGGT VR+D R+LE+
Sbjct: 126 VNILPCIGGTSVRDDQRKLEA 146
Score = 81.0 bits (191), Expect = 1e-15
Identities = 35/49 (71%), Positives = 43/49 (87%)
Frame = +3
Query: 183 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG 329
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC G
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTG 66
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 72.9 bits (171), Expect = 3e-13
Identities = 30/83 (36%), Positives = 55/83 (66%)
Frame = +1
Query: 316 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIXLG 495
+A G+D++A+A++GTGKT + I ++++I +++ QA+++ PTRELA Q ++ + L
Sbjct: 76 VALTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELS 135
Query: 496 DXLNAKCHACIGGTXVREDIRQL 564
+ K GGT +R+DI +L
Sbjct: 136 KHIQLKVMVTTGGTDLRDDIMRL 158
Score = 34.7 bits (76), Expect = 0.087
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +3
Query: 222 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG 329
F+D L +LL GI+ G+EKPS IQ+ +I + G
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTG 80
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 65.3 bits (152), Expect = 5e-11
Identities = 33/80 (41%), Positives = 46/80 (57%)
Frame = +1
Query: 325 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIXLGDXL 504
+G D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI + LG +
Sbjct: 125 EGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPI 184
Query: 505 NAKCHACIGGTXVREDIRQL 564
KC +GG + R+L
Sbjct: 185 TLKCSVIVGGRSLIHQAREL 204
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 65.3 bits (152), Expect = 5e-11
Identities = 33/80 (41%), Positives = 46/80 (57%)
Frame = +1
Query: 325 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIXLGDXL 504
+G D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI + LG +
Sbjct: 125 EGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPI 184
Query: 505 NAKCHACIGGTXVREDIRQL 564
KC +GG + R+L
Sbjct: 185 TLKCSVIVGGRSLIHQAREL 204
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 62.1 bits (144), Expect = 5e-10
Identities = 34/68 (50%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = +1
Query: 334 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIXLGDXL-NA 510
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G + N
Sbjct: 250 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 309
Query: 511 KCHACIGG 534
K H I G
Sbjct: 310 KIHYAIKG 317
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 62.1 bits (144), Expect = 5e-10
Identities = 34/68 (50%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = +1
Query: 334 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIXLGDXL-NA 510
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G + N
Sbjct: 275 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 334
Query: 511 KCHACIGG 534
K H I G
Sbjct: 335 KIHYAIKG 342
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 62.1 bits (144), Expect = 5e-10
Identities = 34/68 (50%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = +1
Query: 334 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIXLGDXL-NA 510
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G + N
Sbjct: 659 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 718
Query: 511 KCHACIGG 534
K H I G
Sbjct: 719 KIHYAIKG 726
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = +1
Query: 328 GRDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPTRELAQQIQKVVIXLGDXL 504
G+DV+A +++G+GKTA F I +LQ++ +AL+++PTRELA Q KVV LG
Sbjct: 61 GKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFT 120
Query: 505 NAKCHACIGGTXVRE 549
+C +GG + E
Sbjct: 121 GLRCACLVGGDQIEE 135
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = +1
Query: 328 GRDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPTRELAQQIQKVVIXLGDXL 504
G+DV+A +++G+GKTA F I +LQ++ +AL+++PTRELA Q KVV LG
Sbjct: 61 GKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFT 120
Query: 505 NAKCHACIGGTXVRE 549
+C +GG + E
Sbjct: 121 GLRCACLVGGDQIEE 135
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +3
Query: 231 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG 329
M LKEELLRGIY +GFEKPSAIQ+ A+ PC G
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTG 33
Score = 52.8 bits (121), Expect = 3e-07
Identities = 28/68 (41%), Positives = 39/68 (57%)
Frame = +1
Query: 328 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIXLGDXLN 507
G+DV Q+Q+G+GKT I ILQ ID Q ++LAP R +AQ+ + + LG LN
Sbjct: 33 GKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQVILLAPQRGMAQRAHEQLKSLGRNLN 92
Query: 508 AKCHACIG 531
C+G
Sbjct: 93 VNA-TCLG 99
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 55.2 bits (127), Expect = 6e-08
Identities = 26/70 (37%), Positives = 44/70 (62%)
Frame = +1
Query: 328 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIXLGDXLN 507
GRD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PTRE++ QI++ V +
Sbjct: 59 GRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVA-PTG 117
Query: 508 AKCHACIGGT 537
A+ +GG+
Sbjct: 118 ARTSVYVGGS 127
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 55.2 bits (127), Expect = 6e-08
Identities = 26/70 (37%), Positives = 44/70 (62%)
Frame = +1
Query: 328 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIXLGDXLN 507
GRD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PTRE++ QI++ V +
Sbjct: 59 GRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVA-PTG 117
Query: 508 AKCHACIGGT 537
A+ +GG+
Sbjct: 118 ARTSVYVGGS 127
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 54.0 bits (124), Expect = 1e-07
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Frame = +1
Query: 316 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQQIQKV 480
+A GRD+I+ A++G+GKT F + L I + L+L PTRELAQQ+Q+V
Sbjct: 162 IAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEV 221
Query: 481 VIXLGDXLNAKCHACIGGTXVREDIRQLE 567
I L K GG R LE
Sbjct: 222 SIDFCHSLGLKMTCLFGGASKGPQARDLE 250
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 52.8 bits (121), Expect = 3e-07
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 328 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIXLGDXL- 504
G DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K L
Sbjct: 78 GMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLP 137
Query: 505 NAKCHACIGGTXVREDIRQL 564
K GG +++D +L
Sbjct: 138 GVKVAVFFGGMAIKKDEERL 157
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 52.8 bits (121), Expect = 3e-07
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 328 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIXLGDXL- 504
G DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K L
Sbjct: 78 GMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLP 137
Query: 505 NAKCHACIGGTXVREDIRQL 564
K GG +++D +L
Sbjct: 138 GVKVAVFFGGMAIKKDEERL 157
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 52.8 bits (121), Expect = 3e-07
Identities = 28/72 (38%), Positives = 41/72 (56%)
Frame = +1
Query: 319 ASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIXLGD 498
A +G+DVI A++G+GKT F+I +LQ + + L+L PTRELA QI + LG
Sbjct: 78 ALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGS 137
Query: 499 XLNAKCHACIGG 534
+ +GG
Sbjct: 138 GIGLIAAVIVGG 149
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 192 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG 329
D + D ++F ++ + + L G+ KPS IQQ A+ +QG
Sbjct: 36 DDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQG 81
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 52.8 bits (121), Expect = 3e-07
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 328 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIXLGDXL- 504
G DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K L
Sbjct: 77 GMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLP 136
Query: 505 NAKCHACIGGTXVREDIRQL 564
K GG +++D +L
Sbjct: 137 GVKVAVFFGGMAIKKDEERL 156
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 52.0 bits (119), Expect = 5e-07
Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 10/86 (11%)
Frame = +1
Query: 325 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ----------ALILAPTRELAQQIQ 474
+ RDVI A++G+GKTA F + +L I TS+ + + A+I+APTRELAQQI+
Sbjct: 337 QNRDVIGVAETGSGKTAAFLLPLLVWI-TSLPKMERQEHRDLGPYAIIMAPTRELAQQIE 395
Query: 475 KVVIXLGDXLNAKCHACIGGTXVRED 552
+ G L K + IGG RED
Sbjct: 396 EETNKFGKLLGIKTVSVIGGAS-RED 420
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 50.4 bits (115), Expect = 2e-06
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Frame = +1
Query: 316 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIR--EC-QALILAPTRELAQQIQKVVI 486
+A G+D+ A A +GTGKTA F + IL+++ + C + L+L PTRELA Q+ +V
Sbjct: 181 VALTGKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFR 240
Query: 487 XLGDXLNAKCHACIGGTXVREDIRQLES 570
L + + C GG ++ L S
Sbjct: 241 KLSTFIQLEVCLCAGGLDLKAQEAALRS 268
Score = 31.9 bits (69), Expect = 0.62
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +3
Query: 117 EDSKNGPSK-DQGSYDGPPGMDPG-TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPS 290
E K+G SK Q + D + G +LDT V +F+ MNL ++L+ G+ P+
Sbjct: 116 EKRKSGKSKKSQENEDFFSALIDGKSLDTS---VNVSFEQMNLSRQILKACSGAGYSDPT 172
Query: 291 AIQQRAIMPCIQG 329
IQQ I + G
Sbjct: 173 PIQQACIPVALTG 185
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 49.2 bits (112), Expect = 4e-06
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Frame = +1
Query: 328 GRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQ---ALILAPTRELAQQIQKVVIXL 492
GRDVI A++G+GKT F + + + I + E A+ILAPTRELA Q K
Sbjct: 341 GRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKF 400
Query: 493 GDXLNAKCHACIGGTXVREDIRQLE 567
L K GG + E I L+
Sbjct: 401 AKPLGLKVACTYGGVGISEQIADLK 425
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 48.0 bits (109), Expect = 9e-06
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Frame = +1
Query: 334 DVIAQAQSGTGKTATFSISILQQIDTSI---RECQALILAPTRELAQQIQKVVIXLGDXL 504
DV+ ++ +G+GKT F + +++ I + + ALIL+P+REL QI V+ + L
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKL 107
Query: 505 NAKCHACIGGTXVREDIRQLES 570
N GG V ++I+ ++
Sbjct: 108 NLTVETVTGGQKVDKNIKMFKN 129
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 44.0 bits (99), Expect = 1e-04
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 14/97 (14%)
Frame = +1
Query: 316 LASKGRDVIAQAQSGTGKTATFSISIL-----QQIDTSIRECQ---ALILAPTRELAQQI 471
+A GRD+I A +G+GKT TF + ++ Q++ + LI+ P+RELA+QI
Sbjct: 223 VALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQI 282
Query: 472 QKVVIXLGDXL------NAKCHACIGGTXVREDIRQL 564
++I + D L + CIGG + E + +
Sbjct: 283 FDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDV 319
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 10/62 (16%)
Frame = +1
Query: 328 GRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQ-----ALILAPTRELAQQIQK 477
G DV+ QA++ GKTA F + I+ +I +T + Q ALILAPTRELA QI +
Sbjct: 418 GHDVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHE 477
Query: 478 VV 483
+
Sbjct: 478 AL 479
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 41.9 bits (94), Expect = 6e-04
Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 7/70 (10%)
Frame = +1
Query: 316 LASKGRDVIAQAQSGTGKTATFSISILQQI-------DTSIRECQALILAPTRELAQQIQ 474
LA + ++++ +A++G+GKT F I ++Q++ D S+ A+I+APT+EL QI
Sbjct: 122 LALENKNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGP-SAVIIAPTKELITQIY 180
Query: 475 KVVIXLGDXL 504
K+ + L L
Sbjct: 181 KLFVKLSQAL 190
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 180 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 311
P + D++ +TF D L E +L+ I G+EK + +Q+ I
Sbjct: 77 PQVDEMDFEPEHKTFADFGLDERILKSIGELGWEKANQVQESVI 120
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 41.5 bits (93), Expect = 8e-04
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Frame = +1
Query: 328 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ----ALILAPTRELAQQIQKVVIXLG 495
G DV+ A++G+GKT I +L+ + + ALI++PTRELA Q + +G
Sbjct: 113 GSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPDYGLGALIISPTRELALQTFSTINAVG 172
Query: 496 DXLNAKCHACIGGTXV 543
C IGG+ V
Sbjct: 173 AHHGFSCGLVIGGSDV 188
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 9/61 (14%)
Frame = +1
Query: 316 LASKGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQ 468
L +G D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA Q
Sbjct: 374 LVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQ 433
Query: 469 I 471
I
Sbjct: 434 I 434
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 9/61 (14%)
Frame = +1
Query: 316 LASKGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQ 468
L +G D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA Q
Sbjct: 374 LVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQ 433
Query: 469 I 471
I
Sbjct: 434 I 434
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 9/61 (14%)
Frame = +1
Query: 316 LASKGRDVIAQAQSGTGKTATFSISILQQI----DTSIRE---C--QALILAPTRELAQQ 468
L + G+D++A AQ+G+GKTA F + I+ ++ D + C + +IL PTRELA Q
Sbjct: 331 LVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQ 390
Query: 469 I 471
I
Sbjct: 391 I 391
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 9/61 (14%)
Frame = +1
Query: 316 LASKGRDVIAQAQSGTGKTATFSISILQQI----DTSIRE---C--QALILAPTRELAQQ 468
L + G+D++A AQ+G+GKTA F + I+ ++ D + C + +IL PTRELA Q
Sbjct: 331 LVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQ 390
Query: 469 I 471
I
Sbjct: 391 I 391
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 9/61 (14%)
Frame = +1
Query: 316 LASKGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQ 468
L +G D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA Q
Sbjct: 374 LVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQ 433
Query: 469 I 471
I
Sbjct: 434 I 434
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 11/79 (13%)
Frame = +1
Query: 331 RDVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILAPTRELAQQIQK 477
+DV+ A++G+GKT F I ++ ++ T +R +ALI+APTREL QI K
Sbjct: 27 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 86
Query: 478 VVIXLGDXLNAKCHACIGG 534
+ L + +GG
Sbjct: 87 HINALISTTQLIATSIVGG 105
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 11/79 (13%)
Frame = +1
Query: 331 RDVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILAPTRELAQQIQK 477
+DV+ A++G+GKT F I ++ ++ T +R +ALI+APTREL QI K
Sbjct: 194 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 253
Query: 478 VVIXLGDXLNAKCHACIGG 534
+ L + +GG
Sbjct: 254 HINALISTTQLIATSIVGG 272
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 11/64 (17%)
Frame = +1
Query: 316 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----------ALILAPTRELA 462
L G+D I +Q+G+GKT F + L ID + + + L+L+PTRELA
Sbjct: 117 LLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELA 176
Query: 463 QQIQ 474
QQI+
Sbjct: 177 QQIE 180
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Frame = +1
Query: 325 KGRDVIAQAQSGTGKTATF---SISILQQIDTSIRE-CQALILAPTRELAQQIQKVVIXL 492
+G+DV+A A++G+GKT F +I +L +++ +I++PTREL+ Q V+ L
Sbjct: 104 EGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSEL 163
Query: 493 GDXLNAKCHACIGGT 537
+ N +GG+
Sbjct: 164 LEGSNLTYGLVMGGS 178
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Frame = +1
Query: 319 ASKGRDVIAQAQSGTGKTATF----SISILQQIDTSIRECQ-ALILAPTRELAQQI 471
A GRDV+ A++G+GKTA + + I+ Q D E A+I+ PTRELA Q+
Sbjct: 299 ALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQV 354
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 9/61 (14%)
Frame = +1
Query: 316 LASKGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQ 468
L +G D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL Q
Sbjct: 585 LIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQ 644
Query: 469 I 471
I
Sbjct: 645 I 645
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 9/61 (14%)
Frame = +1
Query: 316 LASKGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQ 468
L +G D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL Q
Sbjct: 585 LIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQ 644
Query: 469 I 471
I
Sbjct: 645 I 645
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 37.5 bits (83), Expect = 0.012
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 10/91 (10%)
Frame = +1
Query: 328 GRDVIAQAQSGTGKTATFSISILQQI------DTSIRE----CQALILAPTRELAQQIQK 477
G DV+A A +G+GKT F I + ++ D + + + LI+APTREL Q
Sbjct: 773 GNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFT 832
Query: 478 VVIXLGDXLNAKCHACIGGTXVREDIRQLES 570
L KC GG +++ L S
Sbjct: 833 TARQLTYETGLKCGLAFGGYSRNANVQHLRS 863
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 37.5 bits (83), Expect = 0.012
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 10/91 (10%)
Frame = +1
Query: 328 GRDVIAQAQSGTGKTATFSISILQQI------DTSIRE----CQALILAPTRELAQQIQK 477
G DV+A A +G+GKT F I + ++ D + + + LI+APTREL Q
Sbjct: 773 GNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFT 832
Query: 478 VVIXLGDXLNAKCHACIGGTXVREDIRQLES 570
L KC GG +++ L S
Sbjct: 833 TARQLTYETGLKCGLAFGGYSRNANVQHLRS 863
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 37.5 bits (83), Expect = 0.012
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 16/96 (16%)
Frame = +1
Query: 331 RDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRELAQ 465
RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTRELA
Sbjct: 177 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 236
Query: 466 QIQKVVIXLGDXLNAKCHACIGG-TXVREDIRQLES 570
QI K N + GG R+ + +L +
Sbjct: 237 QIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRA 272
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 37.5 bits (83), Expect = 0.012
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 16/96 (16%)
Frame = +1
Query: 331 RDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRELAQ 465
RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTRELA
Sbjct: 161 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 220
Query: 466 QIQKVVIXLGDXLNAKCHACIGG-TXVREDIRQLES 570
QI K N + GG R+ + +L +
Sbjct: 221 QIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRA 256
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 37.5 bits (83), Expect = 0.012
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 16/96 (16%)
Frame = +1
Query: 331 RDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRELAQ 465
RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTRELA
Sbjct: 158 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 217
Query: 466 QIQKVVIXLGDXLNAKCHACIGG-TXVREDIRQLES 570
QI K N + GG R+ + +L +
Sbjct: 218 QIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRA 253
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 9/61 (14%)
Frame = +1
Query: 316 LASKGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQ 468
L +G D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL Q
Sbjct: 585 LIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQ 644
Query: 469 I 471
I
Sbjct: 645 I 645
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 34.3 bits (75), Expect = 0.12
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +1
Query: 331 RDVIAQAQSGTGKTATFSISILQQIDTS-IRECQALILAPTRELAQQIQKVVIXLGDXLN 507
RDV A +G+GKT + + +L + + + QA+IL P + L QI D
Sbjct: 157 RDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLVAQIVDEFKRWNDESG 216
Query: 508 -AKCHACIGGTXVREDIRQLES 570
AK + G ++ RQL S
Sbjct: 217 VAKVVSLSGANDFEKEARQLAS 238
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 10/56 (17%)
Frame = +1
Query: 331 RDVIAQAQSGTGKTATFSISILQQI----------DTSIRECQALILAPTRELAQQ 468
R+V+A A +G+GKT F++ ++ +I ++ + A++L PTRELA Q
Sbjct: 164 RNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 33.5 bits (73), Expect = 0.20
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 16/64 (25%)
Frame = +1
Query: 328 GRDVIAQAQSGTGKTATFSI----SILQQ----IDTSI-----RECQ---ALILAPTREL 459
GRD+++ AQ+G+GKTA F + +ILQ + S+ R+ Q AL+L+PTREL
Sbjct: 203 GRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTREL 262
Query: 460 AQQI 471
+ QI
Sbjct: 263 SLQI 266
>AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical
protein Y39A3B.5a protein.
Length = 582
Score = 31.5 bits (68), Expect = 0.81
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 177 PFPEVHRNYLDPSMAHFWNPLANLLTFFQTNKT 79
P P + + D FWN L+N LTF Q +KT
Sbjct: 338 PPPAIVASMTDEQKLSFWNKLSNKLTFSQQDKT 370
>AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical
protein C41D11.7 protein.
Length = 625
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +1
Query: 337 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIXLGDXLNAKC 516
V Q GTGKT T ++ + + I ++ Q ++LAPTRE I+ + + K
Sbjct: 85 VCIQGPPGTGKTFTLTLLLCRLIQ---QKKQVVVLAPTREALANIRMMTKKTLKRMGIKV 141
Query: 517 H 519
H
Sbjct: 142 H 142
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/46 (28%), Positives = 29/46 (63%)
Frame = +1
Query: 334 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 471
+VI A +G+GKTA +++L+ + + E +A+ + P ++A ++
Sbjct: 1339 NVIVCAPNGSGKTAIAELAVLRHFENT-PEAKAVYITPMEDMATKV 1383
>Z81132-6|CAB03437.1| 315|Caenorhabditis elegans Hypothetical
protein T26E4.8 protein.
Length = 315
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 276 FEKPSAIQQRAIMPCIQGTRCYRSSPV 356
F + AI++ A+ PC G CYR +P+
Sbjct: 2 FFRRQAIRKCALRPCSGGEACYRDTPL 28
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 337 VIAQAQSGTGKTATFSISILQQIDTSIREC 426
+ Q GTGKTAT ++ +L+ + S+R C
Sbjct: 198 IYVSGQPGTGKTAT-TMRVLKSLGKSVRSC 226
>AL023835-15|CAA19492.2| 520|Caenorhabditis elegans Hypothetical
protein Y37A1B.9 protein.
Length = 520
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -3
Query: 153 YLDPSMAHFWNPLANLLTFFQTNKTC-FNRSS*TGKANLKEFP 28
++ + AHF + ++ FF+ + C FN S T K +K+FP
Sbjct: 15 FIPRNSAHFEEDIQKIVEFFRCDPECTFNHSEVTSK-TIKDFP 56
>AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical
protein Y39A3B.5c protein.
Length = 471
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 147 DPSMAHFWNPLANLLTFFQTNKT 79
D FWN L+N LTF Q +KT
Sbjct: 237 DEQKLSFWNKLSNKLTFSQQDKT 259
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 391 ILQQIDTSIRECQALILAPTRELAQQIQKVVIXLGDXLNAK 513
+ Q +DT +ECQ L + + E + +V+ D LNAK
Sbjct: 114 VFQHLDTKAKECQKLTFSVSVEFVELYNEVIY---DLLNAK 151
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 391 ILQQIDTSIRECQALILAPTRELAQQIQKVVIXLGDXLNAK 513
+ Q +DT +ECQ L + + E + +V+ D LNAK
Sbjct: 114 VFQHLDTKAKECQKLTFSVSVEFVELYNEVIY---DLLNAK 151
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 328 GRDVIAQAQSGTGKTATFSISILQ 399
G D + A++G+GKT FS+ I Q
Sbjct: 39 GADALIAAETGSGKTGAFSLPIAQ 62
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 391 ILQQIDTSIRECQALILAPTRELAQQIQKVVIXLGDXLNAK 513
+ Q +DT +ECQ L + + E + +V+ D LNAK
Sbjct: 112 VFQHLDTKAKECQKLTFSVSVEFVELYNEVIY---DLLNAK 149
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,785,357
Number of Sequences: 27780
Number of extensions: 339663
Number of successful extensions: 972
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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