Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_C16
(882 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 109 5e-25
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 60 5e-10
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 54 2e-08
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 52 8e-08
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 51 3e-07
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 47 4e-06
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 38 0.003
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 32 0.094
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 32 0.12
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 32 0.12
SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2 |Schiz... 31 0.29
SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange facto... 30 0.50
SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces p... 28 1.5
SPAC23E2.01 |fep1|gaf2|iron-sensing transcription factor Fep1|Sc... 28 1.5
SPAC15A10.08 |ain1||alpha-actinin|Schizosaccharomyces pombe|chr ... 27 3.5
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 27 4.7
SPCC584.02 |cuf2||Cu metalloregulatory transcription factor Cuf2... 27 4.7
SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomy... 26 6.2
SPBC776.12c |hsk1||serine/threonine protein kinase Hsk1|Schizosa... 26 6.2
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 26 8.2
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 8.2
SPAC57A10.10c |sla1||La protein homolog|Schizosaccharomyces pomb... 26 8.2
SPAPB24D3.04c |mag1||DNA-3-methyladenine glycosylase Mag1|Schizo... 26 8.2
SPAC21E11.04 |ppr1||L-azetidine-2-carboxylic acid acetyltransfer... 26 8.2
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 109 bits (262), Expect = 5e-25
Identities = 57/118 (48%), Positives = 72/118 (61%)
Frame = +2
Query: 485 ITRTQMKEFREAFRLFDKDGDGTITKEELGRVMRSLGQFARVEELQDMLQEVDSDGDGNV 664
+T Q+ EFREAF LFD+D DG IT ELG VMRSLGQ ELQDM+ EVD+DG+G +
Sbjct: 6 LTDEQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTI 65
Query: 665 SFEEFVSILXXXXXXXXXXXXXAEQEERELRDAFRVFDKHNRGYICASDLRXVLQCLG 838
F EF++++ E E+R+AF+VFDK GYI +L VL LG
Sbjct: 66 DFTEFLTMMARKMKD--------TDNEEEVREAFKVFDKDGNGYITVEELTHVLTSLG 115
Score = 75.4 bits (177), Expect = 1e-14
Identities = 33/63 (52%), Positives = 48/63 (76%)
Frame = +2
Query: 503 KEFREAFRLFDKDGDGTITKEELGRVMRSLGQFARVEELQDMLQEVDSDGDGNVSFEEFV 682
+E REAF++FDKDG+G IT EEL V+ SLG+ EE+ DM++E D+DGDG +++EEF
Sbjct: 85 EEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEEFS 144
Query: 683 SIL 691
++
Sbjct: 145 RVI 147
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 59.7 bits (138), Expect = 5e-10
Identities = 37/113 (32%), Positives = 53/113 (46%)
Frame = +2
Query: 485 ITRTQMKEFREAFRLFDKDGDGTITKEELGRVMRSLGQFARVEELQDMLQEVDSDGDGNV 664
IT Q ++ EAF+LFD D D I EL MR+LG A E+ +L++ D G G +
Sbjct: 31 ITEEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYL 90
Query: 665 SFEEFVSILXXXXXXXXXXXXXAEQEERELRDAFRVFDKHNRGYICASDLRXV 823
E+FV ++ E++ AF +FD G I +LR V
Sbjct: 91 QMEDFVRVM--------TEKIVERDPLEEIKRAFELFDDDETGKISLRNLRRV 135
Score = 55.6 bits (128), Expect = 9e-09
Identities = 25/69 (36%), Positives = 42/69 (60%)
Frame = +2
Query: 485 ITRTQMKEFREAFRLFDKDGDGTITKEELGRVMRSLGQFARVEELQDMLQEVDSDGDGNV 664
+ R ++E + AF LFD D G I+ L RV + L + +EL+ M++E D D DG +
Sbjct: 104 VERDPLEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQELEAMIEEFDLDQDGEI 163
Query: 665 SFEEFVSIL 691
+ +EF++I+
Sbjct: 164 NEQEFIAIM 172
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +2
Query: 734 EQEERELRDAFRVFDKHNRGYICASDLRXVLQCLG 838
E++ +++ +AF++FD I +LR ++ LG
Sbjct: 33 EEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALG 67
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 54.4 bits (125), Expect = 2e-08
Identities = 41/117 (35%), Positives = 54/117 (46%)
Frame = +2
Query: 488 TRTQMKEFREAFRLFDKDGDGTITKEELGRVMRSLGQFARVEELQDMLQEVDSDGDGNVS 667
++ Q E +EAF L+D D DG I +G V+RSLG EL + E+ D
Sbjct: 4 SKEQTDEMKEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNEL-GDAIDEKK 62
Query: 668 FEEFVSILXXXXXXXXXXXXXAEQEERELRDAFRVFDKHNRGYICASDLRXVLQCLG 838
F FVS E EE ++ AFRVFDK N GYI + ++ LG
Sbjct: 63 FMSFVS----------NKLRETESEEEYIK-AFRVFDKDNSGYIETAKFADYMKTLG 108
Score = 48.0 bits (109), Expect = 2e-06
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +2
Query: 446 LDRKASIIDESTGITRTQMKE-FREAFRLFDKDGDGTITKEELGRVMRSLGQFARVEELQ 622
+D K + S + T+ +E + +AFR+FDKD G I + M++LG+ E+Q
Sbjct: 58 IDEKKFMSFVSNKLRETESEEEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQ 117
Query: 623 DMLQEVDSDGDGNVSFEEFV 682
M+QE D G+ + +FV
Sbjct: 118 LMVQEADPTNSGSFDYYDFV 137
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 52.4 bits (120), Expect = 8e-08
Identities = 35/115 (30%), Positives = 53/115 (46%)
Frame = +2
Query: 494 TQMKEFREAFRLFDKDGDGTITKEELGRVMRSLGQFARVEELQDMLQEVDSDGDGNVSFE 673
T +++AF LFD+ G G I K +G ++R+ GQ + E + E++S V E
Sbjct: 3 TDDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAE----ITEIESTLPAEVDME 58
Query: 674 EFVSILXXXXXXXXXXXXXAEQEERELRDAFRVFDKHNRGYICASDLRXVLQCLG 838
+F+ +L + E F+VFDK G I +LR VL LG
Sbjct: 59 QFLQVLNRPNGFDMPG------DPEEFVKGFQVFDKDATGMIGVGELRYVLTSLG 107
Score = 45.6 bits (103), Expect = 9e-06
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = +2
Query: 434 ANTNLDRKASIIDESTGITRT-QMKEFREAFRLFDKDGDGTITKEELGRVMRSLGQFARV 610
A ++++ +++ G +EF + F++FDKD G I EL V+ SLG+
Sbjct: 53 AEVDMEQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSN 112
Query: 611 EELQDMLQEVDSDGDGNVSFEEFVSIL 691
EE+ ++L+ V DG V++ +FV ++
Sbjct: 113 EEMDELLKGVPVK-DGMVNYHDFVQMI 138
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 50.8 bits (116), Expect = 3e-07
Identities = 32/118 (27%), Positives = 56/118 (47%)
Frame = +2
Query: 485 ITRTQMKEFREAFRLFDKDGDGTITKEELGRVMRSLGQFARVEELQDMLQEVDSDGDGNV 664
+T +Q++E +EAF L DKDGDG I +E++ ++ SL Q A + + M + ++ +
Sbjct: 42 LTSSQIQELKEAFALLDKDGDGNIGREDVKTMLTSLNQDASEDSINHMFESINPP----I 97
Query: 665 SFEEFVSILXXXXXXXXXXXXXAEQEERELRDAFRVFDKHNRGYICASDLRXVLQCLG 838
+ F++ + +L +AF FD G I S +R L +G
Sbjct: 98 NLAAFLTAMGSMLCRI--------SPRNDLLEAFSTFDDTQSGKIPISTMRDALSSMG 147
Score = 29.1 bits (62), Expect = 0.88
Identities = 22/106 (20%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +2
Query: 377 ITSISPSRSQRQVTFLKPAANTNLDRKASIIDESTGITRTQMK-EFREAFRLFDKDGDGT 553
+TS++ S+ + + + N ++ A + + + R + + EAF FD G
Sbjct: 74 LTSLNQDASEDSINHMFESINPPINLAAFLTAMGSMLCRISPRNDLLEAFSTFDDTQSGK 133
Query: 554 ITKEELGRVMRSLGQFARVEELQDMLQEVDSDGDGNVSFEEFVSIL 691
I + + S+G +E++ +L+ S G +E+FV +
Sbjct: 134 IPISTMRDALSSMGDRMDPQEVESILRSYTS--HGVFYYEKFVDAI 177
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 46.8 bits (106), Expect = 4e-06
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 5/68 (7%)
Frame = +2
Query: 503 KEFREAFRLFDKDGDGTITKEELGRVMRSL-GQFARVEELQDM----LQEVDSDGDGNVS 667
++ + AF+++D D DG I+ EL V++ + G R ++LQ + + EVD D DG +S
Sbjct: 93 EKLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLREDQLQQIVDKTIMEVDKDRDGKIS 152
Query: 668 FEEFVSIL 691
FEEF I+
Sbjct: 153 FEEFKDIV 160
Score = 40.3 bits (90), Expect = 4e-04
Identities = 29/120 (24%), Positives = 54/120 (45%)
Frame = +2
Query: 476 STGITRTQMKEFREAFRLFDKDGDGTITKEELGRVMRSLGQFARVEELQDMLQEVDSDGD 655
++ + +++ R+ F D + G+I + E S+ A + VD DG
Sbjct: 15 NSSFSNEEIERIRKRFIKIDANQSGSIDRNEF----LSIPSVASNPLASRLFSVVDEDGG 70
Query: 656 GNVSFEEFVSILXXXXXXXXXXXXXAEQEERELRDAFRVFDKHNRGYICASDLRXVLQCL 835
G+V F+EF++ L +E +L+ AF+++D GYI +L VL+ +
Sbjct: 71 GDVDFQEFINSLSVFSVHG--------NKEEKLKFAFKIYDIDRDGYISNGELYLVLKMM 122
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 37.5 bits (83), Expect = 0.003
Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 476 STGITRTQM-KEFREAFRLFDKDGDGTITKEELGRVMRSLGQFARVEELQDMLQEVDSDG 652
S R +M +E EAF LFD G I E+L R LG+ E+LQ ML +
Sbjct: 2 SVSTKRLEMDEEAEEAFDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLMLDLAGT-- 59
Query: 653 DGNVSFEEFVSI 688
+G VS EEF +
Sbjct: 60 NGKVSREEFAEL 71
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 743 ERELRDAFRVFDKHNRGYICASDLRXVLQCLG 838
+ E +AF +FD ++GYI DLR LG
Sbjct: 11 DEEAEEAFDLFDVTHKGYIDFEDLRRSCAQLG 42
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 32.3 bits (70), Expect = 0.094
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2
Query: 263 PDKQAIVAESQGPPDESSRPASKEPPTLAV-SPSGSQQSITSISPSRSQR 409
P KQ PP S R ++ EPPT++V SPS S+T P S R
Sbjct: 1011 PPKQPANRVVPLPPTASQRASAYEPPTVSVPSPSALSPSVTPQLPPVSSR 1060
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 31.9 bits (69), Expect = 0.12
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +2
Query: 488 TRTQMKEFREAFRLFDKD-GDGTITKEELGRVMRSLGQFARVEELQDMLQEV-DSDGDGN 661
TR KE ++ ++ F KD G + K E ++ + F + + V D+D +G
Sbjct: 20 TRFDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGY 79
Query: 662 VSFEEFVSIL 691
+ F+EF+ L
Sbjct: 80 IDFKEFICAL 89
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 31.9 bits (69), Expect = 0.12
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +2
Query: 533 DKDGDGTITKEELGRVMRSLGQFARVEELQDMLQEVDSDGDGNVSFEEF 679
+K+ + ++ R+ + L A +E L++ Q+ D+D G +SFEEF
Sbjct: 307 EKEQSAQLDLGDVHRMCQMLHLNASMEFLEETFQKADADHSGKLSFEEF 355
>SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 30.7 bits (66), Expect = 0.29
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +2
Query: 290 SQGPPDESSRPASKEPPTLAVSPSGSQQSITSISPSRSQRQVTFLKPAANTNLDRKASII 469
S PP + P++ TL+ +PS S SI I SR+ R +F K +++ +
Sbjct: 347 SNTPPRNTVTPSTARSSTLSQNPSSSSNSIPLI--SRNLRDFSFFKRCLEEDIEPTLR-L 403
Query: 470 DESTGIT 490
D ++G++
Sbjct: 404 DHASGLS 410
>SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange factor
Sec74|Schizosaccharomyces pombe|chr 1|||Manual
Length = 928
Score = 29.9 bits (64), Expect = 0.50
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 287 ESQGPPDESSRPASKEPPTLAVSPSGSQQSITSISPSRSQ-RQVTFLKPAANTN 445
+SQ P +S A TL++ PSGS T SPSRS T+L + + N
Sbjct: 173 DSQLSPTHTSTIAELAASTLSIFPSGSYAGSTFGSPSRSSIDSSTYLPRSKSVN 226
>SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 390
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 332 EPPTLAVSPSGSQQSITSISPSRSQRQVTFLKPAANTN 445
+PP+L +SPS SQ S+ P Q+ L+P ++N
Sbjct: 316 QPPSLPISPSTSQNSVQPF-PFSIQQPPLHLEPPLSSN 352
>SPAC23E2.01 |fep1|gaf2|iron-sensing transcription factor
Fep1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 564
Score = 28.3 bits (60), Expect = 1.5
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 275 AIVAESQGPPDESSR-PASKEPPTLAVSPSGSQQSITSISPSRSQRQVTFLKPAANTNLD 451
A + + PP S + P+ P VSPS SQQ+ I S S + F +N+D
Sbjct: 441 ASLLNPEEPPSNSDKQPSMSNGPKSEVSPSQSQQA-PLIQSSTSPVSLQFPPEVQGSNVD 499
Query: 452 RK 457
++
Sbjct: 500 KR 501
>SPAC15A10.08 |ain1||alpha-actinin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 621
Score = 27.1 bits (57), Expect = 3.5
Identities = 16/73 (21%), Positives = 32/73 (43%)
Frame = +2
Query: 473 ESTGITRTQMKEFREAFRLFDKDGDGTITKEELGRVMRSLGQFARVEELQDMLQEVDSDG 652
E +++ ++ + FR F+K + + E + SLG EE + +
Sbjct: 477 EKRTLSKQELDGITKVFRHFEKKKSNMLNEVEFYAALASLGLVYDTEEGTALFHRAANSE 536
Query: 653 DGNVSFEEFVSIL 691
+G V++E F I+
Sbjct: 537 EG-VTYERFTEIV 548
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 515 EAFRLFDKDGDGTITKEELGRVMR 586
+ F FD+D DG + EEL + R
Sbjct: 311 DLFYQFDRDNDGALNNEELSALFR 334
>SPCC584.02 |cuf2||Cu metalloregulatory transcription factor
Cuf2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -1
Query: 285 ATIACLSGHDALDVIHQRRISEEVVHRGEYFTC 187
A + CL GH HQ R EV RG C
Sbjct: 10 ACVVCLRGHRGSSCQHQERALIEVRTRGRPLLC 42
>SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 26.2 bits (55), Expect = 6.2
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 269 KQAIVAESQGPPDESSRPASKEPPTLAVSPSGSQQSITSISPS 397
K+ A S+ P+E+ PAS PT +VS S S++ TS++PS
Sbjct: 254 KEHSPATSKHEPEET--PAS---PTPSVSASTSRERSTSVAPS 291
>SPBC776.12c |hsk1||serine/threonine protein kinase
Hsk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 507
Score = 26.2 bits (55), Expect = 6.2
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 470 DESTGITRTQMKEFREAFRLFDKDGDGTIT 559
+E ITRT + E +E +RL +K G+GT +
Sbjct: 52 EEIENITRTFV-ELQENYRLIEKIGEGTFS 80
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1018
Score = 25.8 bits (54), Expect = 8.2
Identities = 22/92 (23%), Positives = 41/92 (44%)
Frame = +2
Query: 290 SQGPPDESSRPASKEPPTLAVSPSGSQQSITSISPSRSQRQVTFLKPAANTNLDRKASII 469
+ P P P T + +PS + S SPS+ ++ ++ + P A T+L K S +
Sbjct: 253 TNNPEISLDEPIKALPSTTSDAPSSLLNTNVSSSPSKFRKFLSSVIP-AKTDLSAKES-L 310
Query: 470 DESTGITRTQMKEFREAFRLFDKDGDGTITKE 565
ST ++ + R + F + + +KE
Sbjct: 311 TSSTRLSTSYKTRKRSSGVAFSSETVTSSSKE 342
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 287 ESQGPPDESSRPASKEPPTLAVSPSGSQQS 376
E +GPP + +RP S P A++P S S
Sbjct: 755 EDEGPPPQPARPESTRP---ALAPPSSSHS 781
>SPAC57A10.10c |sla1||La protein homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 298
Score = 25.8 bits (54), Expect = 8.2
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +2
Query: 563 EELGRVMRSLGQFARVEELQDMLQEVDSDGDGNVSFEE 676
EE G+V+ S E+ ++ ++ + DG ++SF+E
Sbjct: 27 EEAGKVVESQKDTTSEEKKEETTEKKEDDGKKDLSFDE 64
>SPAPB24D3.04c |mag1||DNA-3-methyladenine glycosylase
Mag1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 228
Score = 25.8 bits (54), Expect = 8.2
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +3
Query: 282 WQRARXLLTNL-PDRQVKSPQPWPSALRAVSS-RLH 383
W+R L+ N P+R ++ +P+ +RAV+S +LH
Sbjct: 29 WKRLVKLVGNYRPNRSMEKKEPYEELIRAVASQQLH 64
>SPAC21E11.04 |ppr1||L-azetidine-2-carboxylic acid acetyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 209
Score = 25.8 bits (54), Expect = 8.2
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 7/57 (12%)
Frame = -3
Query: 544 TIFVEETESFTKFFHLSPSYAGAL--IDNGSLSIEV-----GIGRRLQEGYLALGPR 395
T ++ S F++ P+Y G I NG + GIGR L YL PR
Sbjct: 90 TASIDWKTSLLGAFYIKPNYPGRCSHICNGGFLVSPSHRSKGIGRNLANAYLYFAPR 146
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,140,526
Number of Sequences: 5004
Number of extensions: 62606
Number of successful extensions: 222
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 213
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 442483990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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