Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_C16
         (882 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1 pro...    39   2e-04
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    26   1.7  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       25   3.1  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   5.3  
U50472-1|AAA93475.1|  141|Anopheles gambiae protein ( Anopheles ...    24   7.1  

>AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1
           protein protein.
          Length = 160

 Score = 39.1 bits (87), Expect = 2e-04
 Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
 Frame = +2

Query: 503 KEFREAFRLFDKDGDGTITKEELGRVMRSLGQFARVEELQDMLQEV--DSDGDGNVSFEE 676
           ++F E  +L+DK+ DGT+   EL   + +LG+     EL +++++     D DGN+ +  
Sbjct: 85  EDFLECLKLYDKNEDGTMLLAELTHSLTALGERLDDVELDNVMKDCMDPEDDDGNIPYAP 144

Query: 677 FV 682
           F+
Sbjct: 145 FL 146



 Score = 32.7 bits (71), Expect = 0.015
 Identities = 23/114 (20%), Positives = 49/114 (42%)
 Frame = +2

Query: 497 QMKEFREAFRLFDKDGDGTITKEELGRVMRSLGQFARVEELQDMLQEVDSDGDGNVSFEE 676
           ++++ +  F ++D +G G +   +LG  +R+L     + EL   +      G+  + FEE
Sbjct: 9   EIEKAQFVFSVYDWEGSGQMDAMDLGNALRALNLNPTI-ELIGKMGGTQKRGEKKIKFEE 67

Query: 677 FVSILXXXXXXXXXXXXXAEQEERELRDAFRVFDKHNRGYICASDLRXVLQCLG 838
           F+ I                    +  +  +++DK+  G +  ++L   L  LG
Sbjct: 68  FLPIFSQVKKEKEQGCF------EDFLECLKLYDKNEDGTMLLAELTHSLTALG 115


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -1

Query: 357 GLTARVGGSLLAGREDSSGGPWLSATIACLSG 262
           GLT  VG S   G     G P L AT+A + G
Sbjct: 445 GLTGPVGLSGRKGDRGVPGSPGLPATVAAIKG 476


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +2

Query: 296 GPPDESSRPASKEPPTLAVSPSGSQQSITSISPSRSQ 406
           G P  ++ P S  P T  V+P  +  + T  +P  +Q
Sbjct: 402 GTPSTTTMPPSVAPTTSTVAPGTTTTTPTGANPGTTQ 438


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 17/77 (22%), Positives = 33/77 (42%)
 Frame = +2

Query: 290  SQGPPDESSRPASKEPPTLAVSPSGSQQSITSISPSRSQRQVTFLKPAANTNLDRKASII 469
            +Q PP  S   A  +P      P  S +S   I+P  +  Q   +  A + +L   A+++
Sbjct: 827  AQQPPPGSHPGAQTQPQLSQHPPGASGRSSAVITPPSTHHQAAAV-AAHHHHLQHHAAMV 885

Query: 470  DESTGITRTQMKEFREA 520
              +     +Q ++ R +
Sbjct: 886  AAAAAAAASQEQQQRSS 902


>U50472-1|AAA93475.1|  141|Anopheles gambiae protein ( Anopheles
           gambiae putativefatty acid binding protein mRNA, partial
           cds. ).
          Length = 141

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 8/24 (33%), Positives = 17/24 (70%)
 Frame = +2

Query: 338 PTLAVSPSGSQQSITSISPSRSQR 409
           PT+ +  +G + +  ++SPSR++R
Sbjct: 68  PTVELVKNGDEYTFNTLSPSRTRR 91


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 829,623
Number of Sequences: 2352
Number of extensions: 17398
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)