Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_C16
(882 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 33 0.005
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 25 1.2
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 25 1.2
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.7
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.7
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.7
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.7
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.7
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.7
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 23 3.7
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.7
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.7
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 4.9
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.9
AM158085-1|CAJ43389.1| 171|Apis mellifera globin 1 protein. 22 6.5
AM158084-1|CAJ43388.1| 171|Apis mellifera globin 1 protein. 22 6.5
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 8.6
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 32.7 bits (71), Expect = 0.005
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +2
Query: 521 FRLFDKDGDGTITKEELGRVMRS--LGQFARVEELQDMLQEVDSDGDGNVSFEEF 679
F +D++ +G + +EEL + + L + R L M+ D+DGDG ++ EF
Sbjct: 242 FSHYDRNNNGNLEREELEQFAENEDLEELCRGCNLGHMISYDDTDGDGKLNVNEF 296
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 24.6 bits (51), Expect = 1.2
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 358 FGQSAVDYIDLSIEVPAPGNL 420
FG+ +VD++D +P P NL
Sbjct: 306 FGRDSVDHVDFDEFLPPPPNL 326
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 24.6 bits (51), Expect = 1.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 374 SITSISPSRSQRQVTFLKPAANT 442
+I PSRS V+FL+P +NT
Sbjct: 545 TILEKKPSRSSTLVSFLQPFSNT 567
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 296 GPPDESSRPASKEPPTLAVSPSGSQQSITSI 388
G P + RPA+ E + ++ SG Q+ + +I
Sbjct: 371 GTPISTGRPATVEDTSASLPLSGMQEELHTI 401
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 296 GPPDESSRPASKEPPTLAVSPSGSQQSITSI 388
G P + RPA+ E + ++ SG Q+ + +I
Sbjct: 371 GTPISTGRPATVEDTSASLPLSGMQEELHTI 401
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 296 GPPDESSRPASKEPPTLAVSPSGSQQSITSI 388
G P + RPA+ E + ++ SG Q+ + +I
Sbjct: 371 GTPISTGRPATVEDTSASLPLSGMQEELHTI 401
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 296 GPPDESSRPASKEPPTLAVSPSGSQQSITSI 388
G P + RPA+ E + ++ SG Q+ + +I
Sbjct: 371 GTPISTGRPATVEDTSASLPLSGMQEELHTI 401
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 296 GPPDESSRPASKEPPTLAVSPSGSQQSITSI 388
G P + RPA+ E + ++ SG Q+ + +I
Sbjct: 371 GTPISTGRPATVEDTSASLPLSGMQEELHTI 401
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 296 GPPDESSRPASKEPPTLAVSPSGSQQSITSI 388
G P + RPA+ E + ++ SG Q+ + +I
Sbjct: 371 GTPISTGRPATVEDTSASLPLSGMQEELHTI 401
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 23.0 bits (47), Expect = 3.7
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 731 AEQEERELRDAFRVFDKHNRGY 796
+++EE R +F+ FDK + Y
Sbjct: 43 SDEEELSARPSFKTFDKGPKNY 64
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 296 GPPDESSRPASKEPPTLAVSPSGSQQSITSI 388
G P + RPA+ E + ++ SG Q+ + +I
Sbjct: 439 GTPISTGRPATVEDTSASLPLSGMQEELHTI 469
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 296 GPPDESSRPASKEPPTLAVSPSGSQQSITSI 388
G P + RPA+ E + ++ SG Q+ + +I
Sbjct: 439 GTPISTGRPATVEDTSASLPLSGMQEELHTI 469
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.6 bits (46), Expect = 4.9
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 731 AEQEERELRDAFRVFDK 781
+E EER +RD FR ++K
Sbjct: 24 SEDEERLVRDLFRGYNK 40
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.9
Identities = 13/51 (25%), Positives = 20/51 (39%)
Frame = +2
Query: 263 PDKQAIVAESQGPPDESSRPASKEPPTLAVSPSGSQQSITSISPSRSQRQV 415
P + + PP+ S P PP S + SQ I+ S +Q+
Sbjct: 27 PHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNPSQMMISPASGIHQMQQL 77
>AM158085-1|CAJ43389.1| 171|Apis mellifera globin 1 protein.
Length = 171
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 467 IDESTGITRTQMKEFREAFRLFDKD 541
ID++TG+T Q K + + + KD
Sbjct: 18 IDQATGLTERQKKLVQNTWAVVRKD 42
>AM158084-1|CAJ43388.1| 171|Apis mellifera globin 1 protein.
Length = 171
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 467 IDESTGITRTQMKEFREAFRLFDKD 541
ID++TG+T Q K + + + KD
Sbjct: 18 IDQATGLTERQKKLVQNTWAVVRKD 42
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.8 bits (44), Expect = 8.6
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -3
Query: 361 RRADGQGWGLFTCRS 317
R A+G+GWG+ T ++
Sbjct: 501 RTANGRGWGVKTMKT 515
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,653
Number of Sequences: 438
Number of extensions: 4385
Number of successful extensions: 23
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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