Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_C13
(860 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 93 6e-18
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 73 7e-12
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 71 4e-11
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 69 1e-10
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.046
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 40 0.061
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.081
UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;... 36 1.7
UniRef50_Q47H51 Cluster: NUDIX hydrolase; n=1; Dechloromonas aro... 34 5.3
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.3
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.3
UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome sh... 33 7.0
UniRef50_Q5LPI5 Cluster: CobN; n=10; Alphaproteobacteria|Rep: Co... 33 7.0
UniRef50_Q1AW53 Cluster: Ribosome-binding factor A; n=1; Rubroba... 33 7.0
UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer ariet... 33 7.0
UniRef50_A5HC74 Cluster: Putative uncharacterized protein; n=1; ... 33 7.0
UniRef50_Q9NLC2 Cluster: Homeobox protein ceh-24; n=2; Caenorhab... 33 7.0
UniRef50_A3MA42 Cluster: Putative uncharacterized protein; n=1; ... 33 9.3
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 93.5 bits (222), Expect = 6e-18
Identities = 50/81 (61%), Positives = 54/81 (66%)
Frame = +3
Query: 483 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRPFPPGSSPXALSCFX 662
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTR FP +P F
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL-EAPSCALLFR 60
Query: 663 PCRLPEYLFRPXFPSGKXWRF 725
PCRLP+ P F + WRF
Sbjct: 61 PCRLPDTC--PPFSLREAWRF 79
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 73.3 bits (172), Expect = 7e-12
Identities = 36/50 (72%), Positives = 39/50 (78%)
Frame = +3
Query: 501 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRPFPPGSSPXAL 650
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTR FP + AL
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCAL 93
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 70.9 bits (166), Expect = 4e-11
Identities = 38/57 (66%), Positives = 40/57 (70%)
Frame = +3
Query: 507 RPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRPFPPGSSPXALSCFXPCRLP 677
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD R FP + AL F P LP
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCAL-LFLPFGLP 133
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +2
Query: 314 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 412
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 69.3 bits (162), Expect = 1e-10
Identities = 41/60 (68%), Positives = 42/60 (70%)
Frame = -2
Query: 556 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAAERP 377
MLVRGAEPMEKR + L V LL CS L PLILWITVLPPLSEL PLAA ERP
Sbjct: 1 MLVRGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2
Query: 290 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 448
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 93 DPDMIRYIDEFGQTTTRMQ 149
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.046
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 288 SALMNRPTRGERRFAYW 338
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 40.3 bits (90), Expect = 0.061
Identities = 23/67 (34%), Positives = 33/67 (49%)
Frame = +3
Query: 450 ITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRPFPP 629
I +R + + + P T F S PLT+ITKI Q + +T+ +YK T PFP
Sbjct: 44 IMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPL 103
Query: 630 GSSPXAL 650
S +L
Sbjct: 104 QSPSYSL 110
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.081
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 360 ERGSGRAPNTQTASPRALADSLMQ 289
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;
Janthinobacterium sp. Marseille|Rep: Uncharacterized
conserved protein - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 212
Score = 35.5 bits (78), Expect = 1.7
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = -2
Query: 583 PLT*ASIFVMLVRGAEPMEKRQQRGL---FTVPGLLLAFCSHVLSCVIPLILWITVLPPL 413
PLT AS+ + L+ P+ + + RGL T+ G ++A +S V L+L T+L PL
Sbjct: 50 PLTVASLIMFLIANLFPIVEIELRGLRSQTTLTGAVMALAGEGMSLVAMLVLATTLLFPL 109
Query: 412 SELIPL 395
+L+ L
Sbjct: 110 LQLLIL 115
>UniRef50_Q47H51 Cluster: NUDIX hydrolase; n=1; Dechloromonas
aromatica RCB|Rep: NUDIX hydrolase - Dechloromonas
aromatica (strain RCB)
Length = 261
Score = 33.9 bits (74), Expect = 5.3
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = -1
Query: 638 GASRGKRPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGS--WPFAGLLLTC 465
G S +PG+F L+GF +++ C AR+ G A ++ S WPF L+
Sbjct: 148 GRSPHFKPGVFSALAGFVEPGETLEECAAREVREEVGIEIANLRYFHSQPWPFPNSLMVA 207
Query: 464 SFLRY 450
F Y
Sbjct: 208 FFADY 212
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.3
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +3
Query: 171 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 338
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.3
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -1
Query: 251 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 87
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 3
SCAF15018, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 754
Score = 33.5 bits (73), Expect = 7.0
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +3
Query: 417 GGNTVIHRIRGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETR 596
GG+ V ++GI+ ERT + +P + PR W S+ P + +++GG+ R
Sbjct: 611 GGHGVPGELQGIS-ERTLLELTRGKP-LLSHPRAWFVSLDGKPAAQVRHSIIELQGGQRR 668
Query: 597 QDYKDT 614
DT
Sbjct: 669 PSSNDT 674
>UniRef50_Q5LPI5 Cluster: CobN; n=10; Alphaproteobacteria|Rep: CobN
- Silicibacter pomeroyi
Length = 1097
Score = 33.5 bits (73), Expect = 7.0
Identities = 23/58 (39%), Positives = 28/58 (48%)
Frame = -1
Query: 683 VFR*AAGXETGERXRGASRGKRPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATR 510
VFR + G E E G+ P +VLS F+ SDL +GGGA GK P R
Sbjct: 4 VFRESHGLEETETP--TDLGQSPADLVVLS-FSDSDLGAFAAGWHRGGGAVGKLPTLR 58
>UniRef50_Q1AW53 Cluster: Ribosome-binding factor A; n=1;
Rubrobacter xylanophilus DSM 9941|Rep: Ribosome-binding
factor A - Rubrobacter xylanophilus (strain DSM 9941 /
NBRC 16129)
Length = 122
Score = 33.5 bits (73), Expect = 7.0
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = -2
Query: 631 PGGNGLVSL*SCRVSPPLT*ASIFVMLVRGAEPMEKRQQRGLFTVPGLLLA 479
P GLV++ RVSP L+ A++F L+ G +P E R+ GL + G + A
Sbjct: 27 PRLKGLVTVTGVRVSPNLSHATVFYSLLAGGDPEEARE--GLQSAAGRIQA 75
>UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer
arietinum|Rep: Reverse transcriptase - Cicer arietinum
(Chickpea) (Garbanzo)
Length = 37
Score = 33.5 bits (73), Expect = 7.0
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 423 NTVIHRIRGITQERTCE 473
NTVIH +GITQERTCE
Sbjct: 21 NTVIHXNQGITQERTCE 37
>UniRef50_A5HC74 Cluster: Putative uncharacterized protein; n=1;
Adineta vaga|Rep: Putative uncharacterized protein -
Adineta vaga
Length = 400
Score = 33.5 bits (73), Expect = 7.0
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = -1
Query: 614 GIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWPFAGLLLTCSFLRYPPDSV 435
GIF GF + L +D C + GG A +T + G+W + G L C+ + PPD +
Sbjct: 250 GIF-KRKGFYYTMLGIDCCFCQWGGDA--RTFISNNPLGNWTYFGQLNYCADGKAPPDHI 306
Query: 434 D 432
D
Sbjct: 307 D 307
>UniRef50_Q9NLC2 Cluster: Homeobox protein ceh-24; n=2;
Caenorhabditis|Rep: Homeobox protein ceh-24 -
Caenorhabditis elegans
Length = 299
Score = 33.5 bits (73), Expect = 7.0
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Frame = +3
Query: 447 GITQERTCEQKASKRPGTVKRPRCWRFSIGS--APLTSITKIDAQ-VRGGETRQDYKDTR 617
GI +E++ E SKR P +FS+ S +PL S+ ++ Q ++ ++ T
Sbjct: 22 GIDEEKSSEDDCSKRSKVKSNPS--KFSVNSILSPLESLVRVQQQLLKMAASKSGTPGTN 79
Query: 618 PFPPGSSPXALSCFXPCRLPEYLFRPXFP 704
PG+ P + P RLP F FP
Sbjct: 80 AGVPGAFP-----YGPGRLPGNYFAGPFP 103
>UniRef50_A3MA42 Cluster: Putative uncharacterized protein; n=1;
Acinetobacter baumannii ATCC 17978|Rep: Putative
uncharacterized protein - Acinetobacter baumannii
(strain ATCC 17978 / NCDC KC 755)
Length = 183
Score = 33.1 bits (72), Expect = 9.3
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = -2
Query: 556 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAA 386
ML A+ + + ++ GL G+ L C H+++ + L ++P L ++I + A
Sbjct: 1 MLYTAAQTLSRGRKSGLMAAFGIFLGGCFHIIAASLGLTTIFQIIPKLYDIIKILGA 57
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 745,473,629
Number of Sequences: 1657284
Number of extensions: 14591423
Number of successful extensions: 36802
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 35413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36787
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76243001646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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