Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_C12
         (908 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          64   1e-12
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      64   1e-12
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    59   6e-11
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          58   1e-10
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      58   1e-10
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          58   1e-10
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      58   1e-10
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   8.9  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 64.5 bits (150), Expect = 1e-12
 Identities = 27/55 (49%), Positives = 41/55 (74%)
 Frame = +1

Query: 364 LFYDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSD 528
           L+Y ++  E  ALF LFY+AKDF+ F+KTA +A+ ++N+ Q++Y+ Y AVI R D
Sbjct: 99  LYYPQLLREMSALFKLFYHAKDFDIFFKTALWAKNNINEAQYIYSLYTAVITRPD 153



 Score = 58.4 bits (135), Expect = 8e-11
 Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
 Frame = +3

Query: 147 TKNVDAVFVEKQKKILSFFQDVSQ-LNTDDEYYKIGKDYDIEMNMDNYTNKKAVEEFLKM 323
           TK  D  F+ KQKK+ +    V+Q    +  +Y  G+ ++IE N+D+YTN  AV+EFL +
Sbjct: 26  TKTADKDFLLKQKKVYNLLYRVAQPALANITWYNEGQAWNIEANIDSYTNAAAVKEFLSI 85

Query: 324 YRTGFMPKNLEFSAF 368
           Y+ G +P+   FS +
Sbjct: 86  YKHGMLPRGELFSLY 100


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 64.5 bits (150), Expect = 1e-12
 Identities = 27/55 (49%), Positives = 41/55 (74%)
 Frame = +1

Query: 364 LFYDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSD 528
           L+Y ++  E  ALF LFY+AKDF+ F+KTA +A+ ++N+ Q++Y+ Y AVI R D
Sbjct: 99  LYYPQLLREMSALFKLFYHAKDFDIFFKTALWAKNNINEAQYIYSLYTAVITRPD 153



 Score = 58.4 bits (135), Expect = 8e-11
 Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
 Frame = +3

Query: 147 TKNVDAVFVEKQKKILSFFQDVSQ-LNTDDEYYKIGKDYDIEMNMDNYTNKKAVEEFLKM 323
           TK  D  F+ KQKK+ +    V+Q    +  +Y  G+ ++IE N+D+YTN  AV+EFL +
Sbjct: 26  TKTADKDFLLKQKKVYNLLYRVAQPALANITWYNEGQAWNIEANIDSYTNAAAVKEFLSI 85

Query: 324 YRTGFMPKNLEFSAF 368
           Y+ G +P+   FS +
Sbjct: 86  YKHGMLPRGELFSLY 100


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 58.8 bits (136), Expect = 6e-11
 Identities = 26/51 (50%), Positives = 36/51 (70%)
 Frame = +1

Query: 376 KMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSD 528
           ++R E   L+ +   AKD++TF KTA +ARVH+N+GQFL AF  AV+ R D
Sbjct: 99  QLRKEVSLLYRILLGAKDYQTFLKTAAWARVHVNEGQFLKAFVAAVLTRQD 149



 Score = 39.9 bits (89), Expect = 3e-05
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
 Frame = +3

Query: 141 IKTKNVDAVFVEKQKKILSFFQDVSQLNTDDEYYKIGKDYDIEMNMDNYTNKKAVEEFLK 320
           +K +  D   + KQ+ ++   Q +SQ   + E   +G  YDIE N   Y N   V  +  
Sbjct: 20  VKQRAADQDLLNKQQDVIQLLQKISQPIPNQELQNLGASYDIESNSHQYKNPIIVMYYAG 79

Query: 321 MYRTGFM-PKNLEFS 362
             + G + P+   FS
Sbjct: 80  AVKAGLVQPQGTTFS 94


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 58.0 bits (134), Expect = 1e-10
 Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
 Frame = +3

Query: 159 DAVFVEKQKKILSFFQDVSQLNTDD-EYYKIGKDYDIEMNMDNYTNKKAVEEFLKMYRTG 335
           D  F+ KQKKI      V Q +  D E+Y +G++YD+E NMD Y +K  V++FL  Y+ G
Sbjct: 29  DMDFLHKQKKIFDLLLYVRQADLSDAEWYDVGRNYDMESNMDMYKDKNVVQKFLWWYKQG 88

Query: 336 -FMPKNLEFS 362
            F+ +N  F+
Sbjct: 89  MFLSRNAIFT 98



 Score = 58.0 bits (134), Expect = 1e-10
 Identities = 27/47 (57%), Positives = 32/47 (68%)
 Frame = +1

Query: 388 EAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSD 528
           E   LF L Y AKDF+TFYKTA +AR+ +N G F  AF IAV+ R D
Sbjct: 107 EVRMLFELLYNAKDFQTFYKTAAWARLRMNSGMFTTAFSIAVLYRPD 153


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 58.0 bits (134), Expect = 1e-10
 Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
 Frame = +3

Query: 159 DAVFVEKQKKILSFFQDVSQLNTDD-EYYKIGKDYDIEMNMDNYTNKKAVEEFLKMYRTG 335
           D  F+ KQKKI      V Q +  D E+Y +G++YD+E NMD Y +K  V++FL  Y+ G
Sbjct: 29  DMDFLHKQKKIFDLLLYVRQADLSDAEWYDVGRNYDMESNMDMYKDKNVVQKFLWWYKQG 88

Query: 336 -FMPKNLEFS 362
            F+ +N  F+
Sbjct: 89  MFLSRNAIFT 98



 Score = 58.0 bits (134), Expect = 1e-10
 Identities = 27/47 (57%), Positives = 32/47 (68%)
 Frame = +1

Query: 388 EAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSD 528
           E   LF L Y AKDF+TFYKTA +AR+ +N G F  AF IAV+ R D
Sbjct: 107 EVRMLFELLYNAKDFQTFYKTAAWARLRMNSGMFTTAFSIAVLYRPD 153


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 57.6 bits (133), Expect = 1e-10
 Identities = 25/51 (49%), Positives = 35/51 (68%)
 Frame = +1

Query: 376 KMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSD 528
           +MR +A+ LF L Y AK F+ FY TA +AR ++N+  +LYA  +AVI R D
Sbjct: 101 EMRHQAVVLFRLLYSAKTFDVFYNTAVWARFNVNEQMYLYALSVAVIHRPD 151



 Score = 50.4 bits (115), Expect = 2e-08
 Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
 Frame = +3

Query: 141 IKTKNVDAVFVEKQKKILSFFQDVSQLNT-DDEYYKIGKDYDIEMNMDNYTNKKAVEEFL 317
           +  K  D  +V +QK I   F  V Q      E Y+  + +++  N+DNY +K+AV EF+
Sbjct: 22  VPNKVADKTYVTRQKNIYELFWHVDQPTVYHPELYQKARTFNLVENLDNYNDKEAVNEFM 81

Query: 318 KMYRTGFMPKNLEFS 362
           ++ + G +P+   F+
Sbjct: 82  QLLKHGMLPRGQVFT 96


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 57.6 bits (133), Expect = 1e-10
 Identities = 25/51 (49%), Positives = 35/51 (68%)
 Frame = +1

Query: 376 KMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSD 528
           +MR +A+ LF L Y AK F+ FY TA +AR ++N+  +LYA  +AVI R D
Sbjct: 101 EMRHQAVVLFRLLYSAKTFDVFYNTAVWARFNVNEQMYLYALSVAVIHRPD 151



 Score = 50.4 bits (115), Expect = 2e-08
 Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
 Frame = +3

Query: 141 IKTKNVDAVFVEKQKKILSFFQDVSQLNT-DDEYYKIGKDYDIEMNMDNYTNKKAVEEFL 317
           +  K  D  +V +QK I   F  V Q      E Y+  + +++  N+DNY +K+AV EF+
Sbjct: 22  VPNKVADKTYVTRQKNIYELFWHVDQPTVYHPELYQKARTFNLVENLDNYNDKEAVNEFM 81

Query: 318 KMYRTGFMPKNLEFS 362
           ++ + G +P+   F+
Sbjct: 82  QLLKHGMLPRGQVFT 96


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = +1

Query: 364 LFYDKMRDEAIALFHLFYYAKDFETFYK 447
           L YD  +D +  + H F+Y     + Y+
Sbjct: 336 LIYDFFKDSSFRIQHHFFYPDPLASKYE 363


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,007
Number of Sequences: 438
Number of extensions: 3637
Number of successful extensions: 20
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)