Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_C10
         (929 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0031 - 227786-228076                                             29   4.0  
03_02_0553 - 9420960-9421164,9421634-9421812,9421902-9421970,942...    28   9.2  

>08_01_0031 - 227786-228076
          Length = 96

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = -1

Query: 257 RRICQEYRQEYAXGCRCTAASDPEXVYAXATRXRVAH 147
           RR+C E  ++ A GCR  A S+P  +++ A   RVAH
Sbjct: 52  RRVCPEEEEDEA-GCRKIAESEPVDLFSDA--GRVAH 85


>03_02_0553 -
           9420960-9421164,9421634-9421812,9421902-9421970,
           9422452-9422607,9422756-9422968
          Length = 273

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = -2

Query: 256 GEYARSTARSTPRG--AGVPQPATRXR 182
           G Y R+ A+S PRG  AG+PQ   R R
Sbjct: 197 GGYVRNVAKSAPRGGPAGLPQGRPRPR 223


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,419,261
Number of Sequences: 37544
Number of extensions: 238468
Number of successful extensions: 557
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)