Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_C08
         (854 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D57725 Cluster: PREDICTED: hypothetical protein;...    42   0.020
UniRef50_UPI0000DB7B00 Cluster: PREDICTED: similar to fau CG6544...    40   0.11 
UniRef50_Q9VGX3-3 Cluster: Isoform C of Q9VGX3 ; n=3; Endopteryg...    38   0.43 
UniRef50_UPI00015B5EA2 Cluster: PREDICTED: similar to conserved ...    37   0.56 
UniRef50_Q17H31 Cluster: Putative uncharacterized protein; n=1; ...    37   0.56 
UniRef50_A5DWH2 Cluster: Putative uncharacterized protein; n=1; ...    37   0.56 
UniRef50_Q24535 Cluster: Serum response factor homolog; n=3; Dip...    33   6.9  
UniRef50_UPI000065E67F Cluster: Kinesin-like protein KIF25 (Kine...    33   9.2  
UniRef50_A1WCF6 Cluster: Putative uncharacterized protein; n=1; ...    33   9.2  
UniRef50_Q0IPL5 Cluster: Os12g0188700 protein; n=1; Oryza sativa...    33   9.2  

>UniRef50_UPI0000D57725 Cluster: PREDICTED: hypothetical protein;
           n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
           protein - Tribolium castaneum
          Length = 604

 Score = 41.9 bits (94), Expect = 0.020
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +3

Query: 102 MVYESDFYTTRRPYRSTYS 158
           MVYESDFYTTRRPYR +YS
Sbjct: 1   MVYESDFYTTRRPYRPSYS 19


>UniRef50_UPI0000DB7B00 Cluster: PREDICTED: similar to fau
           CG6544-PB, isoform B isoform 1; n=1; Apis mellifera|Rep:
           PREDICTED: similar to fau CG6544-PB, isoform B isoform 1
           - Apis mellifera
          Length = 150

 Score = 39.5 bits (88), Expect = 0.11
 Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
 Frame = +3

Query: 102 MVYESDFYTTRRPYR----STYSVTTPRHYVVVDRDPIAP 209
           MVYESDFYTTRRPY     S+YS+ T + Y   ++ P  P
Sbjct: 1   MVYESDFYTTRRPYSRPLVSSYSI-TKQDYFPWEKVPFVP 39


>UniRef50_Q9VGX3-3 Cluster: Isoform C of Q9VGX3 ; n=3;
           Endopterygota|Rep: Isoform C of Q9VGX3 - Drosophila
           melanogaster (Fruit fly)
          Length = 131

 Score = 37.5 bits (83), Expect = 0.43
 Identities = 36/131 (27%), Positives = 47/131 (35%), Gaps = 12/131 (9%)
 Frame = +3

Query: 102 MVYESDFYTTR----RPYRSTYSVTTPRHYVVVDRD------PIAPXXXXXXXXXXXXXX 251
           MVYES F T R    RP  ++Y+VTTPR  +  DR         +               
Sbjct: 1   MVYESGFTTRRTYSSRPVTTSYAVTTPRLDLCTDRPGSHRSRASSDYSYTSKSSVEKSSY 60

Query: 252 XXXXXXXXLPQRSSYSNTVER--RXXXXXXXXXXXXERXXXXXXXXXXXXXXXXXXRLPY 425
                    P+RS+Y++TVE+  R                                 LP 
Sbjct: 61  DSSNPHSYRPERSTYTSTVEKTSRSGPGGSYNYSTERTSTTGAGPGGYSYSSTTSGNLPG 120

Query: 426 GTTYRHYSYRV 458
           GT YRH+SY V
Sbjct: 121 GTKYRHFSYHV 131


>UniRef50_UPI00015B5EA2 Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to conserved hypothetical protein -
           Nasonia vitripennis
          Length = 273

 Score = 37.1 bits (82), Expect = 0.56
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +3

Query: 102 MVYESDFYTTRRPYRST 152
           MVYESDFYTTRRPY S+
Sbjct: 1   MVYESDFYTTRRPYSSS 17


>UniRef50_Q17H31 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 371

 Score = 37.1 bits (82), Expect = 0.56
 Identities = 21/38 (55%), Positives = 24/38 (63%), Gaps = 7/38 (18%)
 Frame = +3

Query: 102 MVYESDFYTTR-------RPYRSTYSVTTPRHYVVVDR 194
           MVY+SDFYTTR       RP  S+Y+VTTP  Y  V R
Sbjct: 1   MVYDSDFYTTRRVGSSYTRPTISSYTVTTPLRYSGVPR 38


>UniRef50_A5DWH2 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 1046

 Score = 37.1 bits (82), Expect = 0.56
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = +2

Query: 170 AALRGG-GPRPDRATSCRGAVLVL-VLEHEPALGGQRPASAQLVQQHGGAPHRQ 325
           AAL  G G + D+  +  G  L       +PA G   P+S Q+ Q HGG+PH Q
Sbjct: 791 AALESGLGSKSDKPHNITGGSLASHTFRLDPAAGYIEPSSPQVAQAHGGSPHTQ 844


>UniRef50_Q24535 Cluster: Serum response factor homolog; n=3;
           Diptera|Rep: Serum response factor homolog - Drosophila
           melanogaster (Fruit fly)
          Length = 449

 Score = 33.5 bits (73), Expect = 6.9
 Identities = 15/26 (57%), Positives = 16/26 (61%)
 Frame = +2

Query: 254 PALGGQRPASAQLVQQHGGAPHRQRP 331
           PALG  RP S  L+Q  GG P  QRP
Sbjct: 33  PALGAGRPPSGGLLQNMGGVPPMQRP 58


>UniRef50_UPI000065E67F Cluster: Kinesin-like protein KIF25
           (Kinesin-like protein 3).; n=2; Clupeocephala|Rep:
           Kinesin-like protein KIF25 (Kinesin-like protein 3). -
           Takifugu rubripes
          Length = 400

 Score = 33.1 bits (72), Expect = 9.2
 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +2

Query: 128 DASALQVHLQRD-DAAALRGGGPRPDRATSCRGAVLVLVLEHEPALG 265
           + S ++VH     D  A  GGG R D  T+  GA  V  L HEP  G
Sbjct: 154 EVSVMEVHNNEVFDLLAADGGGQRRDVITTSSGASQVTALVHEPVCG 200


>UniRef50_A1WCF6 Cluster: Putative uncharacterized protein; n=1;
           Acidovorax sp. JS42|Rep: Putative uncharacterized
           protein - Acidovorax sp. (strain JS42)
          Length = 118

 Score = 33.1 bits (72), Expect = 9.2
 Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = +2

Query: 134 SALQVHLQRDDAAALRGGGPRP--DRATSCRGAVLVLVLEHEPALGGQRPASAQLVQQHG 307
           ++++  LQ D  AAL    P+   D A   RGA + L     P  G   PA+AQ VQ  G
Sbjct: 11  TSIEAQLQ-DMQAALLASNPQTFEDTAVQLRGAAMALAQALAPVAGALEPAAAQRVQAIG 69


>UniRef50_Q0IPL5 Cluster: Os12g0188700 protein; n=1; Oryza sativa
           (japonica cultivar-group)|Rep: Os12g0188700 protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 99

 Score = 33.1 bits (72), Expect = 9.2
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -3

Query: 456 RDKSSGGKWCRRAGGRCWWTSRSSLRDRRG 367
           R + +G  WC  A  RCWW+S     DR G
Sbjct: 70  RTRRTGTAWCWGARRRCWWSSGHRGADRAG 99


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 518,459,258
Number of Sequences: 1657284
Number of extensions: 7985018
Number of successful extensions: 21367
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21348
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75423184424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)