Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_C07
         (970 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   0.37 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   2.6  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   3.4  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   6.0  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 28.3 bits (60), Expect = 0.37
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -1

Query: 700 GGXPASGGGXXXGXPGXXXXRGGGG 626
           GG    GGG   G PG     GGGG
Sbjct: 208 GGGAPGGGGGSSGGPGPGGGGGGGG 232



 Score = 26.6 bits (56), Expect = 1.1
 Identities = 12/31 (38%), Positives = 12/31 (38%)
 Frame = -1

Query: 688 ASGGGXXXGXPGXXXXRGGGGXPXGAAXXXG 596
           A GGG   G PG      GG  P G     G
Sbjct: 202 AGGGGSGGGAPGGGGGSSGGPGPGGGGGGGG 232


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 2.6
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +3

Query: 615 PXGXPPPPLXXXXPGXPXXXPPPL 686
           P G PP PL     G P    PPL
Sbjct: 590 PMGPPPSPLAGGPLGGPAGSRPPL 613



 Score = 23.8 bits (49), Expect = 7.9
 Identities = 13/31 (41%), Positives = 13/31 (41%)
 Frame = +3

Query: 615 PXGXPPPPLXXXXPGXPXXXPPPLAGXPPXG 707
           P   PPP      P  P   P PLAG P  G
Sbjct: 577 PNAQPPPAPPPPPPMGPP--PSPLAGGPLGG 605


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.0 bits (52), Expect = 3.4
 Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
 Frame = -1

Query: 700 GGXPASGGG-XXXGXPGXXXXRGGGG 626
           GG  ASGGG    G P      GGGG
Sbjct: 818 GGAGASGGGFLITGDPSDTIGAGGGG 843


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 24.2 bits (50), Expect = 6.0
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = -1

Query: 697  GXPASGGGXXXGXPGXXXXRGGGGXPXG 614
            G  A+G G      G     GGGG P G
Sbjct: 2041 GDGATGSGDNGSQHGGGSISGGGGTPGG 2068


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 277,458
Number of Sequences: 2352
Number of extensions: 3425
Number of successful extensions: 30
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 105652443
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)