Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_C07
(970 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 32 0.53
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 32 0.53
AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen prot... 28 2.1
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.2
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 30 2.2
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.2
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.8
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 2.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.8
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 2.8
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 2.8
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 3.8
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 5.0
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 5.0
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 5.0
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 29 5.0
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 29 5.0
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 29 5.0
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 6.6
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 28 8.7
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 28 8.7
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 28 8.7
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 28 8.7
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 8.7
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 28 8.7
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 32.3 bits (70), Expect = 0.53
Identities = 26/97 (26%), Positives = 26/97 (26%)
Frame = +3
Query: 423 GFXPXXPXPPPPXXAPRXXXPRGFLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAXPX 602
G P P PPPP R P L P
Sbjct: 568 GLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMA--PI 625
Query: 603 XXAAPXGXPPPPLXXXXPGXPXXXPPPLAGXPPXGXG 713
AAP PPPP P PPP PP G G
Sbjct: 626 SSAAPPPPPPPP-PMGLPAVGAGAPPPPPPPPPSGAG 661
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 32.3 bits (70), Expect = 0.53
Identities = 26/97 (26%), Positives = 26/97 (26%)
Frame = +3
Query: 423 GFXPXXPXPPPPXXAPRXXXPRGFLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAXPX 602
G P P PPPP R P L P
Sbjct: 394 GLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMA--PI 451
Query: 603 XXAAPXGXPPPPLXXXXPGXPXXXPPPLAGXPPXGXG 713
AAP PPPP P PPP PP G G
Sbjct: 452 SSAAPPPPPPPP-PMGLPAVGAGAPPPPPPPPPSGAG 487
>AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen protein
45 protein.
Length = 327
Score = 27.9 bits (59), Expect(2) = 2.1
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +3
Query: 591 AXPXXXAAPXGXPPPPLXXXXPGXPXXXPPPLAGXPPXG 707
A P A P G P PP PG +AG P G
Sbjct: 215 AGPKGNAGPAGPPGPPGYPGRPGETGDHGKTIAGEAPPG 253
Score = 21.0 bits (42), Expect(2) = 2.1
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +3
Query: 441 PXPPPPXXAPRXXXPRGF 494
P PP P AP RG+
Sbjct: 185 PGPPGPTGAPGDKGSRGY 202
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 597 PXXXAAPXGXPPPPLXXXXPGXPXXXPPPLAGXPP 701
P P G PPPP P PPP PP
Sbjct: 338 PPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 372
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 597 PXXXAAPXGXPPPPLXXXXPGXPXXXPPPLAGXPP 701
P P G PPPP P PPP PP
Sbjct: 348 PPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 382
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +3
Query: 609 AAPX-GXPPPPLXXXXPGXPXXXPPPLAG 692
AAP PPPP+ P P PPP+ G
Sbjct: 35 AAPACAPPPPPMCGCAPPPPPPPPPPMCG 63
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
Frame = +3
Query: 627 PPPPLXXXXPGXPXXXPPP---LAGXPP 701
PPPPL G P PPP L G PP
Sbjct: 564 PPPPLPQNLSGAPPPPPPPPPMLGGPPP 591
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 621 GXPPPPLXXXXPGXPXXXPPPLAGXPPXGXG 713
G PPPP G P PPP G PP G
Sbjct: 712 GPPPPPGLPPITGGPPPPPPP-GGLPPITGG 741
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Frame = +3
Query: 621 GXPPPPLXXXXP---GXPXXXPPPLAGXPP 701
G PPPP P G P PPP G PP
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Frame = +3
Query: 621 GXPPPPLXXXXP---GXPXXXPPPLAGXPPXGXG 713
G PPPP P G P PPP G PP G
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPP-GGLPPISGG 757
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 621 GXPPPPLXXXXPGXPXXXPPPLAGXPPXGXG 713
G PPPP G P PPP G PP G
Sbjct: 712 GPPPPPGLPPITGGPPPPPPP-GGLPPITGG 741
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Frame = +3
Query: 621 GXPPPPLXXXXP---GXPXXXPPPLAGXPP 701
G PPPP P G P PPP G PP
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Frame = +3
Query: 621 GXPPPPLXXXXP---GXPXXXPPPLAGXPPXGXG 713
G PPPP P G P PPP G PP G
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPP-GGLPPISGG 757
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +3
Query: 615 PXGXPPP-PLXXXXPGXPXXXPPPLAGXPP 701
P PPP PL P P PPP+ G P
Sbjct: 198 PHAPPPPVPLTSNIPQAPPAPPPPIGGIAP 227
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 621 GXPPPPLXXXXPGXPXXXPPPLAGXPPXGXG 713
G PPPP G P PPP G PP G
Sbjct: 295 GPPPPPGLPPITGGPPPPPPP-GGLPPITGG 324
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Frame = +3
Query: 621 GXPPPPLXXXXP---GXPXXXPPPLAGXPP 701
G PPPP P G P PPP G PP
Sbjct: 324 GPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Frame = +3
Query: 621 GXPPPPLXXXXP---GXPXXXPPPLAGXPPXGXG 713
G PPPP P G P PPP G PP G
Sbjct: 308 GPPPPPPPGGLPPITGGPPPPPPP-GGLPPISGG 340
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Frame = +3
Query: 615 PXGXPPPPLXXXXPGXP----XXXPPPLAGXPPXG 707
P G PPPP P P PPP G PP G
Sbjct: 276 PTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 310
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = +3
Query: 621 GXPPPPLXXXXPGXPXXX--PPPLAGXPP 701
G PPPP P P PPP AG PP
Sbjct: 270 GSPPPPPTGSPPPPPAGGSPPPPRAGSPP 298
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = +3
Query: 621 GXPPPPLXXXXPGXPXXXPPP--LAGXPP 701
G PPPP P P PPP G PP
Sbjct: 262 GSPPPPRTGSPPPPPTGSPPPPPAGGSPP 290
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = +3
Query: 621 GXPPPPLXXXXPGXPXXXPPPLAG--XPPXGXGS 716
G PPPP PPP AG PP G GS
Sbjct: 295 GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGS 328
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Frame = +3
Query: 609 AAPXGXPPPPLXXXXP----GXPXXXPPPLAGXPP 701
A P G PPPP G PPP AG PP
Sbjct: 231 APPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP 265
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Frame = +3
Query: 615 PXGXPPPPLXXXXPGXP----XXXPPPLAGXPPXG 707
P G PPPP P P PPP G PP G
Sbjct: 297 PTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 331
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = +3
Query: 621 GXPPPPLXXXXPGXPXXX--PPPLAGXPP 701
G PPPP P P PPP AG PP
Sbjct: 291 GSPPPPPTGSPPPPPAGGSPPPPRAGSPP 319
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = +3
Query: 621 GXPPPPLXXXXPGXPXXXPPP--LAGXPP 701
G PPPP P P PPP G PP
Sbjct: 283 GSPPPPRTGSPPPPPTGSPPPPPAGGSPP 311
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = +3
Query: 621 GXPPPPLXXXXPGXPXXXPPPLAG--XPPXGXGS 716
G PPPP PPP AG PP G GS
Sbjct: 316 GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGS 349
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Frame = +3
Query: 609 AAPXGXPPPPLXXXXP----GXPXXXPPPLAGXPP 701
A P G PPPP G PPP AG PP
Sbjct: 252 APPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP 286
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Frame = +3
Query: 615 PXGXPPPPLXXXXPGXP----XXXPPPLAGXPPXG 707
P G PPPP P P PPP G PP G
Sbjct: 282 PTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 316
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = +3
Query: 621 GXPPPPLXXXXPGXPXXX--PPPLAGXPP 701
G PPPP P P PPP AG PP
Sbjct: 276 GSPPPPPTGSPPPPPAGGSPPPPRAGSPP 304
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = +3
Query: 621 GXPPPPLXXXXPGXPXXXPPP--LAGXPP 701
G PPPP P P PPP G PP
Sbjct: 268 GSPPPPRTGSPPPPPTGSPPPPPAGGSPP 296
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = +3
Query: 621 GXPPPPLXXXXPGXPXXXPPPLAG--XPPXGXGS 716
G PPPP PPP AG PP G GS
Sbjct: 301 GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGS 334
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Frame = +3
Query: 609 AAPXGXPPPPLXXXXP----GXPXXXPPPLAGXPP 701
A P G PPPP G PPP AG PP
Sbjct: 237 APPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP 271
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +3
Query: 615 PXGXPPP-PLXXXXPGXPXXXPPPLAGXPP 701
P PPP PL P P PPP+ G P
Sbjct: 184 PHAPPPPVPLTSNIPQAPPAPPPPIGGIAP 213
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +3
Query: 615 PXGXPPP-PLXXXXPGXPXXXPPPLAGXPP 701
P PPP PL P P PPP+ G P
Sbjct: 184 PHAPPPPVPLTSNIPQAPPAPPPPIGGIAP 213
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -1
Query: 706 PXGGXPASGGGXXXGXPGXXXXRGGGGXPXGAA 608
P GG GGG G G GGGG G A
Sbjct: 21 PSGGGGGGGGGCGGGCGGGGGCGGGGGCGGGCA 53
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +3
Query: 612 APXGXPPPPLXXXXP-GXPXXXPPPLAGXPPXGXGS 716
AP PPPPL P PPP+ G P G+
Sbjct: 500 APNPPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGA 535
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 627 PPPPLXXXXPGXPXXXPPPLAGXPP 701
PPPP PG P PPP G PP
Sbjct: 707 PPPP---GIPGYPPAPPPPGVGPPP 728
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 712 PXPXGGXPASGGGXXXGXPGXXXXRGGGGXPXGAA 608
P P G A GG G PG G G P G A
Sbjct: 228 PGPAGAPGAPGGPGNAGTPGTPGAPGNAGAPGGDA 262
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +3
Query: 597 PXXXAAPXGXPPPPLXXXXPGXPXXXPPPLAGXPPXGXGSF 719
P P PPPP P PP AG P S+
Sbjct: 33 PQQCCCPPPPPPPPCGGGYEAPPPPPPPSYAGGPSYAGPSY 73
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 700 GGXPASGGGXXXGXPGXXXXRGGGGXPXGAAXXXG 596
GG GGG G G RGGGG G G
Sbjct: 91 GGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGG 125
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 700 GGXPASGGGXXXGXPGXXXXRGGGGXPXG 614
GG GGG G G RGGGG G
Sbjct: 101 GGGRGGGGGGRGGGGGGGGGRGGGGGGRG 129
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 700 GGXPASGGGXXXGXPGXXXXRGGGGXPXG 614
GG GGG G G RGGGG G
Sbjct: 108 GGGRGGGGGGGGGRGGGGGGRGGGGRGRG 136
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +3
Query: 597 PXXXAAPXGXPPPPLXXXXPGXPXXXPPPLAGXPPXGXGSF 719
P P PPPP+ P P PPP+ PP S+
Sbjct: 47 PPPICPPQFCPPPPMCPPPPPPP---PPPMCPPPPPPMPSY 84
Score = 23.8 bits (49), Expect(2) = 6.2
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +3
Query: 597 PXXXAAPXGXPPPPLXXXXPGXPXXXPPPLAGXPP 701
P P PPPP P P PPP+ P
Sbjct: 53 PQFCPPPPMCPPPPPPPPPPMCPPP-PPPMPSYSP 86
Score = 23.4 bits (48), Expect(2) = 6.2
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +3
Query: 432 PXXPXPPPPXXAPRXXXP 485
P P PPPP P+ P
Sbjct: 41 PPLPCPPPPICPPQFCPP 58
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 7/42 (16%)
Frame = +3
Query: 597 PXXXAAPXGXPPPPLXXXXP-----GXPXXXPPP--LAGXPP 701
P P G PPPPL P P PPP L G PP
Sbjct: 90 PPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPP 131
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 7/42 (16%)
Frame = +3
Query: 597 PXXXAAPXGXPPPPLXXXXP-----GXPXXXPPP--LAGXPP 701
P P G PPPPL P P PPP L G PP
Sbjct: 113 PPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPP 154
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 7/42 (16%)
Frame = +3
Query: 597 PXXXAAPXGXPPPPLXXXXP-----GXPXXXPPP--LAGXPP 701
P P G PPPPL P P PPP L G PP
Sbjct: 363 PPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPP 404
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 615 PXGXPPPPLXXXXPGXPXXXPPPLAGXPPXG 707
P PPPP P P PPP P G
Sbjct: 1341 PPPPPPPPSDDLTPVPPPPPPPPTMSKAPTG 1371
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 597 PXXXAAPXGXPPPPLXXXXPGXPXXXPPPLAGXPPXGXG 713
P A P G P PP PG P P PP G
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAG 192
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 597 PXXXAAPXGXPPPPLXXXXPGXPXXXPPPLAGXPPXGXG 713
P A P G P PP PG P P PP G
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAG 192
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 597 PXXXAAPXGXPPPPLXXXXPGXPXXXPPPLAGXPPXGXG 713
P A P G P PP PG P P PP G
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAG 192
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 597 PXXXAAPXGXPPPPLXXXXPGXPXXXPPPLAGXPPXGXG 713
P A P G P PP PG P P PP G
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAG 192
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 615 PXGXPPPPLXXXXPGXPXXXPPPLAGXPPXG 707
P G PPP PG P PP G PP G
Sbjct: 430 PGGFGPPP-----PGGPGAYGPPPTGFPPVG 455
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 712 PXPXGGXPASGGGXXXGXPGXXXXRGGGGXP 620
P P G A GGG G PG G G P
Sbjct: 264 PGPPGNNGAPGGGYGVGPPGPPGPSGRPGAP 294
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,384,945
Number of Sequences: 27780
Number of extensions: 98471
Number of successful extensions: 1867
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1641
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2510937120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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