Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_C04
         (881 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    26   0.34 
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   3.2  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   9.7  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 26.2 bits (55), Expect = 0.34
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +1

Query: 616 YRHWQQPLGNR 648
           YRHWQ PLG R
Sbjct: 344 YRHWQIPLGRR 354


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 261 FYGSWPFAGLLLTCSFLRYPPDSVDNR 181
           FYGSW      L+   L Y P  V N+
Sbjct: 337 FYGSWINEESKLSLDLLSYVPREVYNK 363


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +3

Query: 363 RYQAFPPGSSLVRSPVPTLPLTGY 434
           RY  +   +S++  P P +P  G+
Sbjct: 225 RYNPYLQAASMLPKPTPLVPQQGF 248


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,378
Number of Sequences: 336
Number of extensions: 4099
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)