Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_C03
         (1257 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   0.23 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   0.51 
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   6.1  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   8.1  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
            methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect(2) = 0.23
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 1166 PPPPPPXPXXXXXP 1207
            PPPPPP P     P
Sbjct: 783  PPPPPPPPPSSLSP 796



 Score = 23.4 bits (48), Expect(2) = 0.23
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 1154 TPXXPPPPPP 1183
            +P  PPPPPP
Sbjct: 782  SPPPPPPPPP 791


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 8.1
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +2

Query: 1166 PPPPPPXPXXXXXPPXXRRG 1225
            PPP PP P     PP    G
Sbjct: 581  PPPAPPPPPPMGPPPSPLAG 600



 Score = 23.4 bits (48), Expect(2) = 0.51
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +2

Query: 1166 PPPPPPXPXXXXXPP 1210
            PPPPPP       PP
Sbjct: 531  PPPPPPGGAVLNIPP 545



 Score = 23.0 bits (47), Expect(2) = 0.51
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 1157 PXXPPPPPP 1183
            P  PPPPPP
Sbjct: 527  PLGPPPPPP 535


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 6.1
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +2

Query: 593  FWNWPWEKPK 622
            FW W W KP+
Sbjct: 2853 FWEWDWSKPE 2862


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 8.1
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = +2

Query: 593  FWNWPWEKP 619
            FW W W KP
Sbjct: 2854 FWEWDWSKP 2862


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 943,977
Number of Sequences: 2352
Number of extensions: 15802
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 143878944
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)